RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
SHKBP1-209ENST00000595803 M0QXV9 152 aa8.25□□□□□ -1.09
SHKBP1-209ENST00000595803 COX6CP09669 75 aa8.25□□□□□ -1.09
SHKBP1-209ENST00000595803 RPL28P46779 137 aaKnown RBP8.25□□□□□ -1.09
SHKBP1-209ENST00000595803 A0A087WYN8 130 aa8.24□□□□□ -1.09
SHKBP1-209ENST00000595803 RPL37AP8A6NKH3 93 aa8.24□□□□□ -1.09
SHKBP1-209ENST00000595803 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
SHKBP1-209ENST00000595803 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
SHKBP1-209ENST00000595803 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
SHKBP1-209ENST00000595803 FABP2P12104 132 aa8.23□□□□□ -1.09
SHKBP1-209ENST00000595803 VAMP3Q15836 100 aa8.23□□□□□ -1.09
SHKBP1-209ENST00000595803 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
SHKBP1-209ENST00000595803 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
SHKBP1-209ENST00000595803 TRIAP1O43715 76 aa8.22□□□□□ -1.09
SHKBP1-209ENST00000595803 UBE2BP63146 152 aa8.22□□□□□ -1.09
SHKBP1-209ENST00000595803 LYRM7Q5U5X0 104 aa8.22□□□□□ -1.09
SHKBP1-209ENST00000595803 PLAC8Q9NZF1 115 aa8.22□□□□□ -1.09
SHKBP1-209ENST00000595803 KCNQ1DNQ9H478 68 aa8.21□□□□□ -1.1
SHKBP1-209ENST00000595803 A0A1B0GV90 55 aa8.2□□□□□ -1.1
SHKBP1-209ENST00000595803 H0YGX0 51 aa8.2□□□□□ -1.1
SHKBP1-209ENST00000595803 C6orf99Q4VX62 202 aa8.2□□□□□ -1.1
SHKBP1-209ENST00000595803 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
SHKBP1-209ENST00000595803 FAM30AQ9NZY2 134 aa8.2□□□□□ -1.1
SHKBP1-209ENST00000595803 PRYO14603 147 aa8.19□□□□□ -1.1
SHKBP1-209ENST00000595803 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
SHKBP1-209ENST00000595803 J3QL48 77 aa8.18□□□□□ -1.1
SHKBP1-209ENST00000595803 Q5VSD8 79 aa8.18□□□□□ -1.1
SHKBP1-209ENST00000595803 SPCS1Q9Y6A9 102 aa8.18□□□□□ -1.1
SHKBP1-209ENST00000595803 VPS13BQ7Z7G8 4022 aa8.17□□□□□ -1.1
SHKBP1-209ENST00000595803 COX7BP24311 80 aa8.17□□□□□ -1.1
SHKBP1-209ENST00000595803 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
SHKBP1-209ENST00000595803 Q6ZSA8 131 aa8.17□□□□□ -1.1
SHKBP1-209ENST00000595803 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
SHKBP1-209ENST00000595803 TRBV20-1A0A075B6N2 111 aa8.16□□□□□ -1.1
SHKBP1-209ENST00000595803 ETDCA0A1B0GVM5 59 aa8.16□□□□□ -1.1
SHKBP1-209ENST00000595803 GTF2H5Q6ZYL4 71 aa8.16□□□□□ -1.1
SHKBP1-209ENST00000595803 CIRBP-AS1Q8TBR5 109 aa8.16□□□□□ -1.1
SHKBP1-209ENST00000595803 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
SHKBP1-209ENST00000595803 SNCGO76070 127 aa8.15□□□□□ -1.1
SHKBP1-209ENST00000595803 ATXN8Q156A1 80 aa8.15□□□□□ -1.1
SHKBP1-209ENST00000595803 CLEC2BQ92478 149 aa8.15□□□□□ -1.1
SHKBP1-209ENST00000595803 DNAH8Q96JB1 4490 aa8.14□□□□□ -1.11
SHKBP1-209ENST00000595803 TCL1BO95988 128 aa8.14□□□□□ -1.11
SHKBP1-209ENST00000595803 SPRR1AP35321 89 aa8.14□□□□□ -1.11
SHKBP1-209ENST00000595803 SCXQ7RTU7 201 aa8.14□□□□□ -1.11
SHKBP1-209ENST00000595803 FAT1Q14517 4588 aa8.14□□□□□ -1.11
SHKBP1-209ENST00000595803 K7EP34 96 aa8.13□□□□□ -1.11
SHKBP1-209ENST00000595803 SLC25A20O43772 301 aa8.13□□□□□ -1.11
SHKBP1-209ENST00000595803 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
SHKBP1-209ENST00000595803 FAM19A1Q7Z5A9 133 aa8.12□□□□□ -1.11
SHKBP1-209ENST00000595803 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
SHKBP1-209ENST00000595803 B5MCH6 92 aa8.11□□□□□ -1.11
SHKBP1-209ENST00000595803 LINC00575Q6W349 94 aa8.11□□□□□ -1.11
SHKBP1-209ENST00000595803 A0A1B0GX51 115 aa8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 LST1O00453 97 aa8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 HAMPP81172 84 aa8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 FAM218AQ96MZ4 157 aa8.1□□□□□ -1.11
SHKBP1-209ENST00000595803 H3BMG7 143 aa8.09□□□□□ -1.11
SHKBP1-209ENST00000595803 BCE1O60756 84 aa8.09□□□□□ -1.11
SHKBP1-209ENST00000595803 TRACP01848 142 aa8.09□□□□□ -1.11
SHKBP1-209ENST00000595803 UBE2V1Q13404 147 aa8.09□□□□□ -1.11
SHKBP1-209ENST00000595803 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
SHKBP1-209ENST00000595803 DNAL4O96015 105 aa8.08□□□□□ -1.12
SHKBP1-209ENST00000595803 UBE2AP49459 152 aa8.08□□□□□ -1.12
SHKBP1-209ENST00000595803 Q6ZRX8 168 aa8.08□□□□□ -1.12
SHKBP1-209ENST00000595803 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
SHKBP1-209ENST00000595803 PSORS1C2Q9UIG4 136 aa8.08□□□□□ -1.12
SHKBP1-209ENST00000595803 XGP55808 180 aa8.07□□□□□ -1.12
SHKBP1-209ENST00000595803 C1orf137Q5JT78 98 aa8.07□□□□□ -1.12
SHKBP1-209ENST00000595803 C9JAW5 83 aa8.05□□□□□ -1.12
SHKBP1-209ENST00000595803 H0Y9J4 135 aa8.05□□□□□ -1.12
SHKBP1-209ENST00000595803 PRLHP81277 87 aa8.05□□□□□ -1.12
SHKBP1-209ENST00000595803 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
SHKBP1-209ENST00000595803 GHRHP01286 108 aa8.03□□□□□ -1.12
SHKBP1-209ENST00000595803 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.03□□□□□ -1.12
SHKBP1-209ENST00000595803 Q9BRP9 147 aa8.03□□□□□ -1.12
SHKBP1-209ENST00000595803 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
SHKBP1-209ENST00000595803 F8W1H4 67 aa8.02□□□□□ -1.13
SHKBP1-209ENST00000595803 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
SHKBP1-209ENST00000595803 BAALC-AS2P0C853 105 aa8.02□□□□□ -1.13
SHKBP1-209ENST00000595803 ORMDL1Q9P0S3 153 aa8.02□□□□□ -1.13
SHKBP1-209ENST00000595803 RNF213Q63HN8 5207 aa8.02□□□□□ -1.13
SHKBP1-209ENST00000595803 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
SHKBP1-209ENST00000595803 IGLV7-43P04211 117 aa8.01□□□□□ -1.13
SHKBP1-209ENST00000595803 OCIAD2Q56VL3 154 aa8.01□□□□□ -1.13
SHKBP1-209ENST00000595803 Q6ZQY7 126 aa8.01□□□□□ -1.13
SHKBP1-209ENST00000595803 MTURNQ8N3F0 131 aa8.01□□□□□ -1.13
SHKBP1-209ENST00000595803 H3BQ85 93 aa8□□□□□ -1.13
SHKBP1-209ENST00000595803 ZNF861PO60384 105 aa8□□□□□ -1.13
SHKBP1-209ENST00000595803 ERC2-IT1O76042 136 aa8□□□□□ -1.13
SHKBP1-209ENST00000595803 H3BT86 120 aa7.99□□□□□ -1.13
SHKBP1-209ENST00000595803 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
SHKBP1-209ENST00000595803 DEFB105AQ8NG35 78 aa7.99□□□□□ -1.13
SHKBP1-209ENST00000595803 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
SHKBP1-209ENST00000595803 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
SHKBP1-209ENST00000595803 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
SHKBP1-209ENST00000595803 PRO0461Q9UI25 63 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms