RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TRAV23DV6A0A075B6W5 121 aa15.41■□□□□ 0.06
TRIM28-204ENST00000594806 COX8AP10176 69 aa15.41■□□□□ 0.06
TRIM28-204ENST00000594806 DLEU1O43261 78 aa15.4■□□□□ 0.06
TRIM28-204ENST00000594806 MUSTN1Q8IVN3 82 aa15.4■□□□□ 0.06
TRIM28-204ENST00000594806 PRR26Q8N8Z3 221 aa15.4■□□□□ 0.06
TRIM28-204ENST00000594806 OR13C6PQ8NH95 151 aa15.4■□□□□ 0.06
TRIM28-204ENST00000594806 HIGD2AQ9BW72 106 aa15.39■□□□□ 0.05
TRIM28-204ENST00000594806 TNXBP22105 4242 aa15.39■□□□□ 0.05
TRIM28-204ENST00000594806 VAMP8Q9BV40 100 aa15.38■□□□□ 0.05
TRIM28-204ENST00000594806 B5MCH6 92 aa15.37■□□□□ 0.05
TRIM28-204ENST00000594806 HERC1Q15751 4861 aa15.36■□□□□ 0.05
TRIM28-204ENST00000594806 ZNF73O43830 326 aaPredicted RBP15.36■□□□□ 0.05
TRIM28-204ENST00000594806 HINT1P49773 126 aaPredicted RBP15.35■□□□□ 0.05
TRIM28-204ENST00000594806 FAM229BQ4G0N7 80 aa15.35■□□□□ 0.05
TRIM28-204ENST00000594806 SPATA45Q537H7 98 aa15.35■□□□□ 0.05
TRIM28-204ENST00000594806 PAM16Q9Y3D7 125 aa15.35■□□□□ 0.05
TRIM28-204ENST00000594806 CRYGAP11844 174 aa15.34■□□□□ 0.05
TRIM28-204ENST00000594806 Q6ZRX8 168 aa15.34■□□□□ 0.05
TRIM28-204ENST00000594806 ZNF706Q9Y5V0 76 aaPredicted RBP15.34■□□□□ 0.05
TRIM28-204ENST00000594806 SMCR5Q8TEV8 140 aa15.31■□□□□ 0.04
TRIM28-204ENST00000594806 TRAV13-2A0A0B4J235 113 aa15.29■□□□□ 0.04
TRIM28-204ENST00000594806 PYY3Q5JQD4 70 aa15.29■□□□□ 0.04
TRIM28-204ENST00000594806 C14orf144Q96I85 54 aa15.29■□□□□ 0.04
TRIM28-204ENST00000594806 SPRR4Q96PI1 79 aa15.28■□□□□ 0.04
TRIM28-204ENST00000594806 SLC25A34Q6PIV7 304 aa15.27■□□□□ 0.04
TRIM28-204ENST00000594806 HIGD1BQ9P298 99 aa15.27■□□□□ 0.04
TRIM28-204ENST00000594806 A0A087X002 238 aa15.26■□□□□ 0.03
TRIM28-204ENST00000594806 A6NDN8 102 aa15.26■□□□□ 0.03
TRIM28-204ENST00000594806 HIST1H4GQ99525 98 aa15.26■□□□□ 0.03
TRIM28-204ENST00000594806 Q9BRP9 147 aa15.25■□□□□ 0.03
TRIM28-204ENST00000594806 ANAPC11Q9NYG5 84 aa15.24■□□□□ 0.03
TRIM28-204ENST00000594806 TRBV7-6A0A0J9YX20 115 aa15.23■□□□□ 0.03
TRIM28-204ENST00000594806 A4D1N5 150 aa15.23■□□□□ 0.03
TRIM28-204ENST00000594806 TYMSOSQ8TAI1 123 aa15.23■□□□□ 0.03
TRIM28-204ENST00000594806 C6orf99Q4VX62 202 aa15.21■□□□□ 0.03
TRIM28-204ENST00000594806 DHRS4-AS1Q9P1J3 65 aa15.2■□□□□ 0.02
TRIM28-204ENST00000594806 COX7BP24311 80 aa15.19■□□□□ 0.02
TRIM28-204ENST00000594806 ELOF1P60002 83 aaKnown RBP15.19■□□□□ 0.02
TRIM28-204ENST00000594806 ERC2-IT1O76042 136 aa15.18■□□□□ 0.02
TRIM28-204ENST00000594806 KRTAP13-2Q52LG2 175 aa15.18■□□□□ 0.02
TRIM28-204ENST00000594806 LINC00483Q53H64 154 aa15.17■□□□□ 0.02
TRIM28-204ENST00000594806 A0A1B0GWB2 263 aa15.16■□□□□ 0.02
TRIM28-204ENST00000594806 TAL2Q16559 108 aa15.16■□□□□ 0.02
TRIM28-204ENST00000594806 C2orf91Q6ZV80 131 aa15.15■□□□□ 0.02
TRIM28-204ENST00000594806 GAGE2AQ6NT46 116 aa15.13■□□□□ 0.01
TRIM28-204ENST00000594806 SMIM11BQ8TCY0 68 aa15.13■□□□□ 0.01
TRIM28-204ENST00000594806 CTAG1AP78358 180 aa15.08■□□□□ 0
TRIM28-204ENST00000594806 VAMP3Q15836 100 aa15.08■□□□□ 0
TRIM28-204ENST00000594806 C3orf22Q8N5N4 141 aa15.08■□□□□ 0
TRIM28-204ENST00000594806 CEND1Q8N111 149 aa15.06■□□□□ 0
TRIM28-204ENST00000594806 LINC00304Q8N9R0 145 aa15.06■□□□□ 0
TRIM28-204ENST00000594806 C12orf57Q99622 126 aa15.05■□□□□ -0
TRIM28-204ENST00000594806 NHP2Q9NX24 153 aaKnown RBP15.05■□□□□ -0
TRIM28-204ENST00000594806 TMEM238LA0A1B0GVL6 79 aa15.04■□□□□ -0
TRIM28-204ENST00000594806 A6NJY4 79 aa15.04■□□□□ -0
TRIM28-204ENST00000594806 UQCR10Q9UDW1 63 aa15.04■□□□□ -0
TRIM28-204ENST00000594806 A0A0B4J2C4 111 aa15.03■□□□□ -0
TRIM28-204ENST00000594806 CFC1BP0CG36 223 aa15.03■□□□□ -0
TRIM28-204ENST00000594806 CFC1P0CG37 223 aa15.03■□□□□ -0
TRIM28-204ENST00000594806 SPRR1BP22528 89 aa15.03■□□□□ -0
TRIM28-204ENST00000594806 ST20-AS1Q8NBB2 130 aa15.03■□□□□ -0
TRIM28-204ENST00000594806 SPAG11AQ6PDA7 123 aa15.02■□□□□ -0
TRIM28-204ENST00000594806 RAB37Q96AX2 223 aa15.02■□□□□ -0
TRIM28-204ENST00000594806 SSBP3-AS1Q7Z2R9 100 aa15□□□□□ -0.01
TRIM28-204ENST00000594806 SLC25A20O43772 301 aa14.99□□□□□ -0.01
TRIM28-204ENST00000594806 HSD52Q0P140 79 aa14.99□□□□□ -0.01
TRIM28-204ENST00000594806 BVES-AS1Q5T3Y7 98 aa14.98□□□□□ -0.01
TRIM28-204ENST00000594806 TSPAN13O95857 204 aa14.97□□□□□ -0.01
TRIM28-204ENST00000594806 IGLV9-49A0A0B4J1Y8 123 aa14.96□□□□□ -0.01
TRIM28-204ENST00000594806 C4orf48Q5BLP8 95 aa14.96□□□□□ -0.01
TRIM28-204ENST00000594806 TEX49A0A1B0GTD5 131 aa14.95□□□□□ -0.02
TRIM28-204ENST00000594806 SMIM6P0DI80 62 aa14.95□□□□□ -0.02
TRIM28-204ENST00000594806 HMCN2Q8NDA2 5059 aa14.95□□□□□ -0.02
TRIM28-204ENST00000594806 MOBPQ13875 183 aa14.94□□□□□ -0.02
TRIM28-204ENST00000594806 LINC00575Q6W349 94 aa14.94□□□□□ -0.02
TRIM28-204ENST00000594806 Q8NBF4 154 aa14.94□□□□□ -0.02
TRIM28-204ENST00000594806 LAMTOR3Q9UHA4 124 aa14.94□□□□□ -0.02
TRIM28-204ENST00000594806 FXYD2P54710 66 aa14.93□□□□□ -0.02
TRIM28-204ENST00000594806 PRO1854Q9UHT4 67 aa14.92□□□□□ -0.02
TRIM28-204ENST00000594806 IGLV5-48A0A075B6I7 105 aa14.91□□□□□ -0.02
TRIM28-204ENST00000594806 H7C2G1 150 aa14.9□□□□□ -0.02
TRIM28-204ENST00000594806 DEFB105AQ8NG35 78 aa14.9□□□□□ -0.02
TRIM28-204ENST00000594806 hADV29S1A0JD25 119 aa14.89□□□□□ -0.03
TRIM28-204ENST00000594806 C9orf153Q5TBE3 101 aa14.89□□□□□ -0.03
TRIM28-204ENST00000594806 SPINK1P00995 79 aa14.87□□□□□ -0.03
TRIM28-204ENST00000594806 H0YGX0 51 aa14.86□□□□□ -0.03
TRIM28-204ENST00000594806 LINC01547P58512 204 aaPredicted RBP14.86□□□□□ -0.03
TRIM28-204ENST00000594806 Q1RN00 199 aa14.85□□□□□ -0.03
TRIM28-204ENST00000594806 SNCGO76070 127 aa14.84□□□□□ -0.03
TRIM28-204ENST00000594806 RPS29P62273 56 aaKnown RBP14.83□□□□□ -0.04
TRIM28-204ENST00000594806 PRR4Q16378 134 aa14.82□□□□□ -0.04
TRIM28-204ENST00000594806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.82□□□□□ -0.04
TRIM28-204ENST00000594806 PRO1933Q9H354 126 aa14.81□□□□□ -0.04
TRIM28-204ENST00000594806 LOC105371267A0A1B0GV96 52 aa14.8□□□□□ -0.04
TRIM28-204ENST00000594806 Q6ZQY7 126 aa14.8□□□□□ -0.04
TRIM28-204ENST00000594806 SMIM29Q86T20 159 aa14.8□□□□□ -0.04
TRIM28-204ENST00000594806 Q8N377 158 aa14.8□□□□□ -0.04
TRIM28-204ENST00000594806 PPDPFLQ8WWR9 84 aa14.77□□□□□ -0.05
TRIM28-204ENST00000594806 A0A1B0GX51 115 aa14.75□□□□□ -0.05
TRIM28-204ENST00000594806 OCIAD2Q56VL3 154 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms