RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 D6R8Y8 96 aa4.91□□□□□ -1.62
SMAD4-215ENST00000592911 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
SMAD4-215ENST00000592911 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
SMAD4-215ENST00000592911 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
SMAD4-215ENST00000592911 TOMM7Q9P0U1 55 aa4.91□□□□□ -1.62
SMAD4-215ENST00000592911 CYSLTR1Q9Y271 337 aa4.91□□□□□ -1.62
SMAD4-215ENST00000592911 ZNF706Q9Y5V0 76 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-215ENST00000592911 RPL37AP8A6NKH3 93 aa4.9□□□□□ -1.63
SMAD4-215ENST00000592911 RPL24P83731 157 aaKnown RBP4.9□□□□□ -1.63
SMAD4-215ENST00000592911 DAND5Q8N907 189 aa4.9□□□□□ -1.63
SMAD4-215ENST00000592911 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.63
SMAD4-215ENST00000592911 PLEKHB2Q96CS7 222 aa4.9□□□□□ -1.63
SMAD4-215ENST00000592911 NPYP01303 97 aa4.89□□□□□ -1.63
SMAD4-215ENST00000592911 ORMDL2Q53FV1 153 aa4.89□□□□□ -1.63
SMAD4-215ENST00000592911 ATP5L2Q7Z4Y8 100 aa4.89□□□□□ -1.63
SMAD4-215ENST00000592911 LINC01549A6NIU2 74 aa4.88□□□□□ -1.63
SMAD4-215ENST00000592911 FABP2P12104 132 aa4.88□□□□□ -1.63
SMAD4-215ENST00000592911 ERASQ7Z444 233 aa4.88□□□□□ -1.63
SMAD4-215ENST00000592911 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
SMAD4-215ENST00000592911 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
SMAD4-215ENST00000592911 A0A1B0GXF2 115 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 IGIPA6NJ69 53 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 F8W1H4 67 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 HSBP1O75506 76 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 FAM19A1Q7Z5A9 133 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 TIMM17AQ99595 171 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
SMAD4-215ENST00000592911 IGLV5-45A0A087WSX0 123 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 PRLHP81277 87 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 TMEM136Q6ZRR5 245 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 C3orf22Q8N5N4 141 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 CHCHD1Q96BP2 118 aaKnown RBP4.86□□□□□ -1.63
SMAD4-215ENST00000592911 PRELID3AQ96N28 172 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 SPRR4Q96PI1 79 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 MAP1LC3AQ9H492 121 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 SPANXCQ9NY87 97 aa4.86□□□□□ -1.63
SMAD4-215ENST00000592911 IGKV2-28A0A075B6P5 120 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 A0A1W2PPM0 123 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 IGKV2D-28P01615 120 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 COX8AP10176 69 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 MT1HP80294 61 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 COX17Q14061 63 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 SFTA2Q6UW10 78 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 Q6ZVH6 145 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 Q8N8P6 123 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 COX7B2Q8TF08 81 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 ERG28Q9UKR5 140 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 SPCS1Q9Y6A9 102 aa4.85□□□□□ -1.63
SMAD4-215ENST00000592911 TINCRA0A1B0GVN0 87 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 M0R378 163 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 SLC25A20O43772 301 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 ATP5LO75964 103 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 KRTAP19-2Q3LHN2 52 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 HSPB8Q9UJY1 196 aa4.84□□□□□ -1.63
SMAD4-215ENST00000592911 SYS1-DBNDD2H3BUS1 97 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 SMIM13P0DJ93 91 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 VPREB1P12018 145 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 Q8NBF4 154 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 MAP1LC3CQ9BXW4 147 aa4.83□□□□□ -1.64
SMAD4-215ENST00000592911 NXT2Q9NPJ8 142 aaKnown RBP4.83□□□□□ -1.64
SMAD4-215ENST00000592911 H3BUT2 72 aa4.82□□□□□ -1.64
SMAD4-215ENST00000592911 KRTAP10-6P60371 365 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-215ENST00000592911 LINC00483Q53H64 154 aa4.82□□□□□ -1.64
SMAD4-215ENST00000592911 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
SMAD4-215ENST00000592911 Q8N377 158 aa4.82□□□□□ -1.64
SMAD4-215ENST00000592911 HERV-K104P63124 156 aa4.81□□□□□ -1.64
SMAD4-215ENST00000592911 BOD1L2Q8IYS8 172 aa4.81□□□□□ -1.64
SMAD4-215ENST00000592911 TOMM6Q96B49 74 aa4.81□□□□□ -1.64
SMAD4-215ENST00000592911 HIGD2AQ9BW72 106 aa4.81□□□□□ -1.64
SMAD4-215ENST00000592911 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-215ENST00000592911 LEPROTL1O95214 131 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 LINC01545Q5VT33 79 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 ATOH7Q8N100 152 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 ANAPC13Q9BS18 74 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 HIGD1BQ9P298 99 aa4.8□□□□□ -1.64
SMAD4-215ENST00000592911 SPINK8P0C7L1 97 aa4.79□□□□□ -1.64
SMAD4-215ENST00000592911 ZC2HC1BQ5TFG8 222 aa4.79□□□□□ -1.64
SMAD4-215ENST00000592911 SND1-IT1Q9HBX3 110 aa4.79□□□□□ -1.64
SMAD4-215ENST00000592911 IGLV5-39A0A0G2JS06 123 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 PRYO14603 147 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 SPRR1AP35321 89 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 TAL2Q16559 108 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 LYRM7Q5U5X0 104 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 C2orf91Q6ZV80 131 aa4.78□□□□□ -1.64
SMAD4-215ENST00000592911 H3BMG7 143 aa4.77□□□□□ -1.65
SMAD4-215ENST00000592911 Q6Q795 121 aa4.77□□□□□ -1.65
SMAD4-215ENST00000592911 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
SMAD4-215ENST00000592911 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-215ENST00000592911 E9PLD3 99 aa4.76□□□□□ -1.65
SMAD4-215ENST00000592911 KIAA1644Q3SXP7 199 aa4.76□□□□□ -1.65
SMAD4-215ENST00000592911 SCGB3A1Q96QR1 104 aa4.76□□□□□ -1.65
SMAD4-215ENST00000592911 KCNQ1DNQ9H478 68 aa4.76□□□□□ -1.65
SMAD4-215ENST00000592911 IGLV8-61A0A075B6I0 122 aa4.75□□□□□ -1.65
SMAD4-215ENST00000592911 PFN2P35080 140 aa4.75□□□□□ -1.65
SMAD4-215ENST00000592911 PMVKQ15126 192 aa4.75□□□□□ -1.65
SMAD4-215ENST00000592911 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms