RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 USP17L23D6RBM5 183 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 TMEM262E9PQX1 116 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 COX7A2LO14548 114 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 TLX1NBP0CAT3 122 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 RPL13AP40429 203 aaKnown RBP2.86□□□□□ -1.95
ERCC1-216ENST00000592444 SEC61BP60468 96 aaKnown RBP2.86□□□□□ -1.95
ERCC1-216ENST00000592444 S100A12P80511 92 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 SS18Q15532 418 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 SLC25A34Q6PIV7 304 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 C2orf82Q6UX34 121 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 COX7B2Q8TF08 81 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 C2orf48Q96LS8 159 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 SPANXDQ9BXN6 97 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 GEMIN7Q9H840 131 aaKnown RBP2.86□□□□□ -1.95
ERCC1-216ENST00000592444 SPANXCQ9NY87 97 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 C6orf48Q9UBA6 75 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 UQCR10Q9UDW1 63 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 NDUFA12Q9UI09 145 aa2.86□□□□□ -1.95
ERCC1-216ENST00000592444 IGKV3OR2-268A0A0C4DH90 116 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 ZNF815PA8K554 130 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 H3BRM9 83 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 CXCL5P42830 114 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 FXYD2P54710 66 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 SPAG11BQ08648 103 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 ORAOV1Q8WV07 137 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 LINC00526Q96FQ7 95 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 SNHG12Q9BXW3 62 aa2.85□□□□□ -1.95
ERCC1-216ENST00000592444 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 TRBV30A0A0K0K1B3 111 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 F8WDY8 70 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 TSTD3H0UI37 97 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 CRPP02741 224 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 HERVK_113P61574 105 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 C9orf116Q5BN46 136 aaPredicted RBP2.84□□□□□ -1.95
ERCC1-216ENST00000592444 BVES-AS1Q5T3Y7 98 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 UNQ6190/PRO20217Q6UXQ8 127 aa2.84□□□□□ -1.95
ERCC1-216ENST00000592444 HERV-K104P63124 156 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 HSD52Q0P140 79 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 TAL2Q16559 108 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 HIGD2BQ4VC39 106 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
ERCC1-216ENST00000592444 SFTA2Q6UW10 78 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 ERG28Q9UKR5 140 aa2.83□□□□□ -1.96
ERCC1-216ENST00000592444 IGLV5-37A0A075B6J1 123 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 HSBP1L1C9JCN9 74 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 PRSS2P07478 247 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 SMIM13P0DJ93 91 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 VPREB1P12018 145 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 LGALS3P17931 250 aaKnown RBP2.82□□□□□ -1.96
ERCC1-216ENST00000592444 CTAG1AP78358 180 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 COX17Q14061 63 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 Q6ZVH6 145 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 LINC00337Q8N6G1 96 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 DAND5Q8N907 189 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 LINC00308Q8TCZ7 52 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 SND1-IT1Q9HBX3 110 aa2.82□□□□□ -1.96
ERCC1-216ENST00000592444 A0A0B4J2C4 111 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 IGKV2-24A0A0C4DH68 120 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 TMEM238C9JI98 176 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 NDUFC2-KCTD14E9PQ53 114 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 APOMO95445 188 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 SYCNQ0VAF6 134 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 MIR7-3HGQ8N6C7 128 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
ERCC1-216ENST00000592444 A0A096LNI7 61 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 A4D1N5 150 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 TAX1BP3O14907 124 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 NDUFC2O95298 119 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 IFITM1P13164 125 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 KRTAP11-1Q8IUC1 163 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 CARD19Q96LW7 228 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
ERCC1-216ENST00000592444 H0Y9J4 135 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 K7ERJ3 54 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 IGLV6-57P01721 117 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 HINT1P49773 126 aaPredicted RBP2.79□□□□□ -1.96
ERCC1-216ENST00000592444 C6orf226Q5I0X4 101 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 MUSTN1Q8IVN3 82 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
ERCC1-216ENST00000592444 TRBV10-2A0A0K0K1G8 114 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 FAM168BA1KXE4 195 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 SPRR1AP35321 89 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 C1orf137Q5JT78 98 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 CFAP161Q6P656 301 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 SCGB1D4Q6XE38 83 aa2.78□□□□□ -1.96
ERCC1-216ENST00000592444 A0A1W2PNN7 141 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 PCP4L1A6NKN8 68 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 M0R143 59 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 PFN2P35080 140 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 CKS1BP61024 79 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 LBHQ53QV2 105 aaPredicted RBP2.77□□□□□ -1.97
ERCC1-216ENST00000592444 MEIG1Q5JSS6 88 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 KRTAP13-1Q8IUC0 172 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 XAGE1AQ9HD64 81 aa2.77□□□□□ -1.97
ERCC1-216ENST00000592444 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms