RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
DNMT1-207ENST00000586588 A0A096LPF7 62 aa8.7□□□□□ -1.02
DNMT1-207ENST00000586588 C3orf84H3BNL1 204 aa8.7□□□□□ -1.02
DNMT1-207ENST00000586588 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
DNMT1-207ENST00000586588 ETDCA0A1B0GVM5 59 aa8.69□□□□□ -1.02
DNMT1-207ENST00000586588 VPREB1P12018 145 aa8.69□□□□□ -1.02
DNMT1-207ENST00000586588 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
DNMT1-207ENST00000586588 M0R378 163 aa8.69□□□□□ -1.02
DNMT1-207ENST00000586588 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
DNMT1-207ENST00000586588 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
DNMT1-207ENST00000586588 PSCAO43653 123 aa8.68□□□□□ -1.02
DNMT1-207ENST00000586588 SMR3AQ99954 134 aa8.68□□□□□ -1.02
DNMT1-207ENST00000586588 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
DNMT1-207ENST00000586588 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
DNMT1-207ENST00000586588 NDUFB1O75438 58 aa8.65□□□□□ -1.02
DNMT1-207ENST00000586588 IGLV1-51P01701 117 aa8.65□□□□□ -1.02
DNMT1-207ENST00000586588 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
DNMT1-207ENST00000586588 KPRPQ5T749 579 aaPredicted RBP8.65□□□□□ -1.02
DNMT1-207ENST00000586588 PRR34Q9NV39 138 aa8.64□□□□□ -1.03
DNMT1-207ENST00000586588 SETD2Q9BYW2 2564 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-207ENST00000586588 A8MUN3 132 aa8.64□□□□□ -1.03
DNMT1-207ENST00000586588 UBE2BP63146 152 aa8.63□□□□□ -1.03
DNMT1-207ENST00000586588 Q5VV11 94 aa8.62□□□□□ -1.03
DNMT1-207ENST00000586588 Q8N377 158 aa8.62□□□□□ -1.03
DNMT1-207ENST00000586588 A0A1W2PNM2 257 aa8.6□□□□□ -1.03
DNMT1-207ENST00000586588 EGFEM1PQ0D2K5 195 aa8.6□□□□□ -1.03
DNMT1-207ENST00000586588 X6R8D5 127 aa8.6□□□□□ -1.03
DNMT1-207ENST00000586588 DSCR10P59022 87 aa8.6□□□□□ -1.03
DNMT1-207ENST00000586588 NIPBLQ6KC79 2804 aaeCLIP8.59□□□□□ -1.03
DNMT1-207ENST00000586588 UBE2AP49459 152 aa8.59□□□□□ -1.03
DNMT1-207ENST00000586588 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
DNMT1-207ENST00000586588 KTN1-AS1Q86SY8 53 aa8.59□□□□□ -1.03
DNMT1-207ENST00000586588 HIVEP2P31629 2446 aa8.59□□□□□ -1.03
DNMT1-207ENST00000586588 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
DNMT1-207ENST00000586588 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
DNMT1-207ENST00000586588 HIVEP1P15822 2718 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 LELP1Q5T871 98 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 RETNQ9HD89 108 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 ST20-AS1Q8NBB2 130 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 Q8NBF4 154 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 SPRR4Q96PI1 79 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 LIMD2Q9BT23 127 aa8.58□□□□□ -1.04
DNMT1-207ENST00000586588 NSD1Q96L73 2696 aaPredicted RBP8.58□□□□□ -1.04
DNMT1-207ENST00000586588 TNP2Q05952 138 aa8.57□□□□□ -1.04
DNMT1-207ENST00000586588 PRR4Q16378 134 aa8.57□□□□□ -1.04
DNMT1-207ENST00000586588 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
DNMT1-207ENST00000586588 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
DNMT1-207ENST00000586588 KCNQ1DNQ9H478 68 aa8.57□□□□□ -1.04
DNMT1-207ENST00000586588 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
DNMT1-207ENST00000586588 B9D2Q9BPU9 175 aa8.56□□□□□ -1.04
DNMT1-207ENST00000586588 K7EQZ3 153 aa8.56□□□□□ -1.04
DNMT1-207ENST00000586588 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
DNMT1-207ENST00000586588 FN1P02751 2386 aaKnown RBP8.55□□□□□ -1.04
DNMT1-207ENST00000586588 JMJD1CQ15652 2540 aa8.55□□□□□ -1.04
DNMT1-207ENST00000586588 A8MU10 97 aa8.55□□□□□ -1.04
DNMT1-207ENST00000586588 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
DNMT1-207ENST00000586588 Q8N9P0 234 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-207ENST00000586588 MP68P56378 58 aa8.54□□□□□ -1.04
DNMT1-207ENST00000586588 DHRS4-AS1Q9P1J3 65 aa8.54□□□□□ -1.04
DNMT1-207ENST00000586588 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
DNMT1-207ENST00000586588 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
DNMT1-207ENST00000586588 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.04
DNMT1-207ENST00000586588 FLNBO75369 2602 aaKnown RBP8.52□□□□□ -1.05
DNMT1-207ENST00000586588 Q9BRP9 147 aa8.52□□□□□ -1.05
DNMT1-207ENST00000586588 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
DNMT1-207ENST00000586588 NDUFS5O43920 106 aa8.51□□□□□ -1.05
DNMT1-207ENST00000586588 INAFM1C9JVW0 142 aa8.5□□□□□ -1.05
DNMT1-207ENST00000586588 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
DNMT1-207ENST00000586588 H3BPC8 53 aa8.49□□□□□ -1.05
DNMT1-207ENST00000586588 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
DNMT1-207ENST00000586588 Q6ZRX8 168 aa8.48□□□□□ -1.05
DNMT1-207ENST00000586588 KRTAP10-3P60369 221 aa8.48□□□□□ -1.05
DNMT1-207ENST00000586588 Q75L30 129 aa8.48□□□□□ -1.05
DNMT1-207ENST00000586588 NKAPP1Q8N9T2 125 aa8.47□□□□□ -1.05
DNMT1-207ENST00000586588 PRR15LQ9BU68 103 aa8.47□□□□□ -1.05
DNMT1-207ENST00000586588 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
DNMT1-207ENST00000586588 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
DNMT1-207ENST00000586588 LOC101927531A0A1B0GV80 90 aa8.46□□□□□ -1.05
DNMT1-207ENST00000586588 C7orf33Q8WU49 177 aa8.46□□□□□ -1.05
DNMT1-207ENST00000586588 PRB2P02812 416 aaPredicted RBP8.46□□□□□ -1.06
DNMT1-207ENST00000586588 VWFP04275 2813 aa8.45□□□□□ -1.06
DNMT1-207ENST00000586588 LCA10Q71F78 164 aa8.45□□□□□ -1.06
DNMT1-207ENST00000586588 C15orf56Q8N910 161 aa8.45□□□□□ -1.06
DNMT1-207ENST00000586588 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
DNMT1-207ENST00000586588 A6NN06 94 aa8.45□□□□□ -1.06
DNMT1-207ENST00000586588 SPTSSBQ8NFR3 76 aa8.44□□□□□ -1.06
DNMT1-207ENST00000586588 F8P00451 2351 aa8.44□□□□□ -1.06
DNMT1-207ENST00000586588 DEFB4AO15263 64 aa8.44□□□□□ -1.06
DNMT1-207ENST00000586588 TRRAPQ9Y4A5 3859 aa8.43□□□□□ -1.06
DNMT1-207ENST00000586588 SPRR1AP35321 89 aa8.43□□□□□ -1.06
DNMT1-207ENST00000586588 IGKV2D-24A0A075B6R9 120 aa8.42□□□□□ -1.06
DNMT1-207ENST00000586588 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
DNMT1-207ENST00000586588 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
DNMT1-207ENST00000586588 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
DNMT1-207ENST00000586588 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
DNMT1-207ENST00000586588 A6NED7 52 aa8.4□□□□□ -1.06
DNMT1-207ENST00000586588 CDC42SE1Q9NRR8 79 aa8.4□□□□□ -1.06
DNMT1-207ENST00000586588 H0Y9P7 68 aa8.4□□□□□ -1.06
DNMT1-207ENST00000586588 DEFB135Q30KP9 77 aa8.4□□□□□ -1.07
DNMT1-207ENST00000586588 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms