RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 FAM229BQ4G0N7 80 aa14.58□□□□□ -0.08
TTC39C-209ENST00000584250 SPRR4Q96PI1 79 aa14.58□□□□□ -0.08
TTC39C-209ENST00000584250 JOSD1Q15040 202 aaPredicted RBP14.57□□□□□ -0.08
TTC39C-209ENST00000584250 SCGB1D4Q6XE38 83 aa14.57□□□□□ -0.08
TTC39C-209ENST00000584250 ERC2-IT1O76042 136 aa14.56□□□□□ -0.08
TTC39C-209ENST00000584250 SPANXCQ9NY87 97 aa14.56□□□□□ -0.08
TTC39C-209ENST00000584250 C3orf22Q8N5N4 141 aa14.55□□□□□ -0.08
TTC39C-209ENST00000584250 LRP2P98164 4655 aa14.55□□□□□ -0.08
TTC39C-209ENST00000584250 TRAV23DV6A0A075B6W5 121 aa14.54□□□□□ -0.08
TTC39C-209ENST00000584250 TSPAN13O95857 204 aa14.54□□□□□ -0.08
TTC39C-209ENST00000584250 Q9BRP9 147 aa14.54□□□□□ -0.08
TTC39C-209ENST00000584250 SPANXDQ9BXN6 97 aa14.54□□□□□ -0.08
TTC39C-209ENST00000584250 S100A12P80511 92 aa14.53□□□□□ -0.08
TTC39C-209ENST00000584250 Q6ZRX8 168 aa14.51□□□□□ -0.09
TTC39C-209ENST00000584250 PPDPFQ9H3Y8 114 aa14.51□□□□□ -0.09
TTC39C-209ENST00000584250 UBR4Q5T4S7 5183 aa14.51□□□□□ -0.09
TTC39C-209ENST00000584250 OR13C6PQ8NH95 151 aa14.5□□□□□ -0.09
TTC39C-209ENST00000584250 ZNF73O43830 326 aaPredicted RBP14.49□□□□□ -0.09
TTC39C-209ENST00000584250 PYY3Q5JQD4 70 aa14.48□□□□□ -0.09
TTC39C-209ENST00000584250 MUSTN1Q8IVN3 82 aa14.46□□□□□ -0.09
TTC39C-209ENST00000584250 ZNF706Q9Y5V0 76 aaPredicted RBP14.46□□□□□ -0.09
TTC39C-209ENST00000584250 VAMP8Q9BV40 100 aa14.44□□□□□ -0.1
TTC39C-209ENST00000584250 PAM16Q9Y3D7 125 aa14.44□□□□□ -0.1
TTC39C-209ENST00000584250 SPATA45Q537H7 98 aa14.43□□□□□ -0.1
TTC39C-209ENST00000584250 GAGE2AQ6NT46 116 aa14.43□□□□□ -0.1
TTC39C-209ENST00000584250 LINC00304Q8N9R0 145 aa14.43□□□□□ -0.1
TTC39C-209ENST00000584250 IFITM1P13164 125 aa14.42□□□□□ -0.1
TTC39C-209ENST00000584250 LINC00483Q53H64 154 aa14.41□□□□□ -0.1
TTC39C-209ENST00000584250 LINC00518Q8N0U6 118 aa14.41□□□□□ -0.1
TTC39C-209ENST00000584250 LPAP08519 4548 aa14.41□□□□□ -0.1
TTC39C-209ENST00000584250 PRR4Q16378 134 aa14.39□□□□□ -0.11
TTC39C-209ENST00000584250 Q6ZVH6 145 aa14.39□□□□□ -0.11
TTC39C-209ENST00000584250 COX8AP10176 69 aa14.38□□□□□ -0.11
TTC39C-209ENST00000584250 ST20-AS1Q8NBB2 130 aa14.38□□□□□ -0.11
TTC39C-209ENST00000584250 C6orf99Q4VX62 202 aa14.36□□□□□ -0.11
TTC39C-209ENST00000584250 C14orf144Q96I85 54 aa14.36□□□□□ -0.11
TTC39C-209ENST00000584250 RETNLBQ9BQ08 111 aa14.35□□□□□ -0.11
TTC39C-209ENST00000584250 CBY1Q9Y3M2 126 aa14.34□□□□□ -0.11
TTC39C-209ENST00000584250 A6NDN8 102 aa14.33□□□□□ -0.12
TTC39C-209ENST00000584250 DLEU1O43261 78 aa14.33□□□□□ -0.12
TTC39C-209ENST00000584250 HINT1P49773 126 aaPredicted RBP14.33□□□□□ -0.12
TTC39C-209ENST00000584250 COPS9Q8WXC6 57 aa14.33□□□□□ -0.12
TTC39C-209ENST00000584250 Q8NBF4 154 aa14.32□□□□□ -0.12
TTC39C-209ENST00000584250 IGLV9-49A0A0B4J1Y8 123 aa14.31□□□□□ -0.12
TTC39C-209ENST00000584250 ELOF1P60002 83 aaKnown RBP14.31□□□□□ -0.12
TTC39C-209ENST00000584250 COX7BP24311 80 aa14.3□□□□□ -0.12
TTC39C-209ENST00000584250 MOBPQ13875 183 aa14.29□□□□□ -0.12
TTC39C-209ENST00000584250 SLC25A34Q6PIV7 304 aa14.29□□□□□ -0.12
TTC39C-209ENST00000584250 LOC105371267A0A1B0GV96 52 aa14.28□□□□□ -0.12
TTC39C-209ENST00000584250 A4D1N5 150 aa14.26□□□□□ -0.13
TTC39C-209ENST00000584250 DHRS4-AS1Q9P1J3 65 aa14.25□□□□□ -0.13
TTC39C-209ENST00000584250 SMIM11BQ8TCY0 68 aa14.24□□□□□ -0.13
TTC39C-209ENST00000584250 TRAV13-2A0A0B4J235 113 aa14.23□□□□□ -0.13
TTC39C-209ENST00000584250 TRBV7-6A0A0J9YX20 115 aa14.21□□□□□ -0.13
TTC39C-209ENST00000584250 SMIM6P0DI80 62 aa14.21□□□□□ -0.13
TTC39C-209ENST00000584250 SPAG11AQ6PDA7 123 aa14.21□□□□□ -0.13
TTC39C-209ENST00000584250 HIST1H4GQ99525 98 aa14.21□□□□□ -0.13
TTC39C-209ENST00000584250 HIGD1BQ9P298 99 aa14.21□□□□□ -0.13
TTC39C-209ENST00000584250 C2orf91Q6ZV80 131 aa14.2□□□□□ -0.14
TTC39C-209ENST00000584250 C12orf57Q99622 126 aa14.2□□□□□ -0.14
TTC39C-209ENST00000584250 SPRR1BP22528 89 aa14.19□□□□□ -0.14
TTC39C-209ENST00000584250 C4orf48Q5BLP8 95 aa14.19□□□□□ -0.14
TTC39C-209ENST00000584250 A0A1B0GWB2 263 aa14.18□□□□□ -0.14
TTC39C-209ENST00000584250 SSBP3-AS1Q7Z2R9 100 aa14.18□□□□□ -0.14
TTC39C-209ENST00000584250 CTAG1AP78358 180 aa14.17□□□□□ -0.14
TTC39C-209ENST00000584250 C9orf153Q5TBE3 101 aa14.17□□□□□ -0.14
TTC39C-209ENST00000584250 DEFB105AQ8NG35 78 aa14.16□□□□□ -0.14
TTC39C-209ENST00000584250 UQCR10Q9UDW1 63 aa14.14□□□□□ -0.15
TTC39C-209ENST00000584250 LINC01547P58512 204 aaPredicted RBP14.13□□□□□ -0.15
TTC39C-209ENST00000584250 RNF213Q63HN8 5207 aa14.12□□□□□ -0.15
TTC39C-209ENST00000584250 SPINK1P00995 79 aa14.12□□□□□ -0.15
TTC39C-209ENST00000584250 TAL2Q16559 108 aa14.12□□□□□ -0.15
TTC39C-209ENST00000584250 IGLV7-46A0A075B6I9 117 aa14.1□□□□□ -0.15
TTC39C-209ENST00000584250 Q1RN00 199 aa14.1□□□□□ -0.15
TTC39C-209ENST00000584250 PRO1933Q9H354 126 aa14.1□□□□□ -0.15
TTC39C-209ENST00000584250 SMIM29Q86T20 159 aa14.08□□□□□ -0.16
TTC39C-209ENST00000584250 IGLV5-48A0A075B6I7 105 aa14.06□□□□□ -0.16
TTC39C-209ENST00000584250 TEX49A0A1B0GTD5 131 aa14.06□□□□□ -0.16
TTC39C-209ENST00000584250 LAMTOR3Q9UHA4 124 aa14.06□□□□□ -0.16
TTC39C-209ENST00000584250 CFC1BP0CG36 223 aa14.05□□□□□ -0.16
TTC39C-209ENST00000584250 CFC1P0CG37 223 aa14.05□□□□□ -0.16
TTC39C-209ENST00000584250 CEND1Q8N111 149 aa14.05□□□□□ -0.16
TTC39C-209ENST00000584250 Q8N377 158 aa14.05□□□□□ -0.16
TTC39C-209ENST00000584250 LINC00575Q6W349 94 aa14.04□□□□□ -0.16
TTC39C-209ENST00000584250 HSD52Q0P140 79 aa14.02□□□□□ -0.17
TTC39C-209ENST00000584250 H7C2G1 150 aa14.01□□□□□ -0.17
TTC39C-209ENST00000584250 RPS29P62273 56 aaKnown RBP14.01□□□□□ -0.17
TTC39C-209ENST00000584250 VAMP3Q15836 100 aa14.01□□□□□ -0.17
TTC39C-209ENST00000584250 TPRXLQ17RH7 258 aa14.01□□□□□ -0.17
TTC39C-209ENST00000584250 HRCT1Q6UXD1 115 aa14.01□□□□□ -0.17
TTC39C-209ENST00000584250 A0A0G2JQZ4 141 aa14□□□□□ -0.17
TTC39C-209ENST00000584250 NHP2Q9NX24 153 aaKnown RBP13.99□□□□□ -0.17
TTC39C-209ENST00000584250 FXYD2P54710 66 aa13.98□□□□□ -0.17
TTC39C-209ENST00000584250 FP248Q71RG6 208 aaPredicted RBP13.98□□□□□ -0.17
TTC39C-209ENST00000584250 TMEM238LA0A1B0GVL6 79 aa13.97□□□□□ -0.17
TTC39C-209ENST00000584250 A6NJY4 79 aa13.97□□□□□ -0.17
TTC39C-209ENST00000584250 SLC25A20O43772 301 aa13.96□□□□□ -0.17
TTC39C-209ENST00000584250 RAB37Q96AX2 223 aa13.96□□□□□ -0.17
TTC39C-209ENST00000584250 hADV29S1A0JD25 119 aa13.95□□□□□ -0.18
TTC39C-209ENST00000584250 Q6ZQY7 126 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms