RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 KRTAP29-1A8MX34 341 aaPredicted RBP5.45□□□□□ -1.54
SUPT4H1-206ENST00000581204 CFC1BP0CG36 223 aa5.45□□□□□ -1.54
SUPT4H1-206ENST00000581204 CFC1P0CG37 223 aa5.45□□□□□ -1.54
SUPT4H1-206ENST00000581204 RPL18AQ02543 176 aaKnown RBP5.45□□□□□ -1.54
SUPT4H1-206ENST00000581204 PPDPFQ9H3Y8 114 aa5.45□□□□□ -1.54
SUPT4H1-206ENST00000581204 A0A087WTM6 91 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 A0A1B0GWB2 263 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 Q8N814 137 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 XAGE1AQ9HD64 81 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 PRO1854Q9UHT4 67 aa5.44□□□□□ -1.54
SUPT4H1-206ENST00000581204 LOC107984156A0A0G2JMH3 177 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 H7C2G1 150 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 Q1RN00 199 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 Q6ZRP5 223 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 ARL17AQ8IVW1 177 aa5.43□□□□□ -1.54
SUPT4H1-206ENST00000581204 TRAV13-2A0A0B4J235 113 aa5.42□□□□□ -1.54
SUPT4H1-206ENST00000581204 TAX1BP3O14907 124 aa5.42□□□□□ -1.54
SUPT4H1-206ENST00000581204 RPL13AP40429 203 aaKnown RBP5.42□□□□□ -1.54
SUPT4H1-206ENST00000581204 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
SUPT4H1-206ENST00000581204 PKIGQ9Y2B9 76 aa5.42□□□□□ -1.54
SUPT4H1-206ENST00000581204 H3BUT2 72 aa5.41□□□□□ -1.54
SUPT4H1-206ENST00000581204 NCR3O14931 201 aa5.41□□□□□ -1.54
SUPT4H1-206ENST00000581204 NDUFC2O95298 119 aa5.41□□□□□ -1.54
SUPT4H1-206ENST00000581204 PSMB2P49721 201 aa5.4□□□□□ -1.54
SUPT4H1-206ENST00000581204 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SUPT4H1-206ENST00000581204 S100A7L2Q5SY68 101 aa5.4□□□□□ -1.54
SUPT4H1-206ENST00000581204 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
SUPT4H1-206ENST00000581204 NAA38Q9BRA0 125 aaKnown RBP5.4□□□□□ -1.54
SUPT4H1-206ENST00000581204 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 IGKV2-28A0A075B6P5 120 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 IGKV2-24A0A0C4DH68 120 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 A0A1B0GV90 55 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 TSPAN13O95857 204 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 IGKV2D-28P01615 120 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 C9orf129Q5T035 196 aaKnown RBP5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 NKAPP1Q8N9T2 125 aa5.39□□□□□ -1.55
SUPT4H1-206ENST00000581204 A0A096LNI7 61 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 SCGB1C2P0DMR2 95 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 FABP2P12104 132 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 VAMP3Q15836 100 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 LINC01620Q4KN68 170 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 DPH3Q96FX2 82 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 TNXBP22105 4242 aa5.38□□□□□ -1.55
SUPT4H1-206ENST00000581204 TRBV10-2A0A0K0K1G8 114 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 A0A1W2PPM0 123 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 M0R378 163 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 SMR3BP02814 79 aaPredicted RBP5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 COX6CP09669 75 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 FUSP35637 526 aaKnown RBP eCLIP5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 LYRM7Q5U5X0 104 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 Q8NDZ9 215 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 TMEM126AQ9H061 195 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
SUPT4H1-206ENST00000581204 FAM168BA1KXE4 195 aa5.36□□□□□ -1.55
SUPT4H1-206ENST00000581204 SDIM1Q6ZPB5 146 aa5.36□□□□□ -1.55
SUPT4H1-206ENST00000581204 FAM19A5Q7Z5A7 132 aaPredicted RBP5.36□□□□□ -1.55
SUPT4H1-206ENST00000581204 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SUPT4H1-206ENST00000581204 FAT4Q6V0I7 4981 aa5.36□□□□□ -1.55
SUPT4H1-206ENST00000581204 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
SUPT4H1-206ENST00000581204 SMIM11BQ8TCY0 68 aa5.35□□□□□ -1.55
SUPT4H1-206ENST00000581204 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SUPT4H1-206ENST00000581204 CBY1Q9Y3M2 126 aa5.35□□□□□ -1.55
SUPT4H1-206ENST00000581204 TRBV10-3A0A0K0K1G6 114 aa5.34□□□□□ -1.55
SUPT4H1-206ENST00000581204 GTF2H5Q6ZYL4 71 aa5.34□□□□□ -1.55
SUPT4H1-206ENST00000581204 SPCS1Q9Y6A9 102 aa5.34□□□□□ -1.55
SUPT4H1-206ENST00000581204 M0QXV9 152 aa5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 IGLV6-57P01721 117 aa5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 RPL28P46779 137 aaKnown RBP5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 KRTAP10-1P60331 282 aa5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 C7orf33Q8WU49 177 aa5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 C22orf24Q9Y442 160 aa5.33□□□□□ -1.56
SUPT4H1-206ENST00000581204 TRAV23DV6A0A075B6W5 121 aa5.32□□□□□ -1.56
SUPT4H1-206ENST00000581204 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
SUPT4H1-206ENST00000581204 RPL37AP8A6NKH3 93 aa5.32□□□□□ -1.56
SUPT4H1-206ENST00000581204 K7EP34 96 aa5.32□□□□□ -1.56
SUPT4H1-206ENST00000581204 TRBV20-1A0A075B6N2 111 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 H0YGX0 51 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 HAMPP81172 84 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 C6orf99Q4VX62 202 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 DIRC1Q969H9 104 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
SUPT4H1-206ENST00000581204 PANO1I0J062 215 aa5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 TCL1BO95988 128 aa5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 KRTAP7-1Q8IUC3 87 aa5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
SUPT4H1-206ENST00000581204 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
SUPT4H1-206ENST00000581204 SNCGO76070 127 aa5.29□□□□□ -1.56
SUPT4H1-206ENST00000581204 UBE2BP63146 152 aa5.29□□□□□ -1.56
SUPT4H1-206ENST00000581204 KCNQ1DNQ9H478 68 aa5.29□□□□□ -1.56
SUPT4H1-206ENST00000581204 A0A087WYN8 130 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms