RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 SNAPINO95295 136 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 SMIM13P0DJ93 91 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 G0S2P27469 103 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 CXCL5P42830 114 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 UBE2AP49459 152 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 COX19Q49B96 90 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 NKAPP1Q8N9T2 125 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 IFI27L1Q96BM0 104 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 PMCHL2Q9BQD1 86 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 TP73-AS1Q9UF72 201 aa2.31□□□□□ -2.04
DDX42-211ENST00000580108 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 TRGC2P03986 189 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 RPL28P46779 137 aaKnown RBP2.3□□□□□ -2.04
DDX42-211ENST00000580108 LINC00158P58513 81 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 SVBPQ8N300 66 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 DAND5Q8N907 189 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 TMEM126AQ9H061 195 aa2.3□□□□□ -2.04
DDX42-211ENST00000580108 SERF1AO75920 110 aa2.29□□□□□ -2.04
DDX42-211ENST00000580108 FABP4P15090 132 aa2.29□□□□□ -2.04
DDX42-211ENST00000580108 HIGD2AQ9BW72 106 aa2.29□□□□□ -2.04
DDX42-211ENST00000580108 PPDPFQ9H3Y8 114 aa2.29□□□□□ -2.04
DDX42-211ENST00000580108 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 LOC105371267A0A1B0GV96 52 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 LINC01549A6NIU2 74 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 HSBP1O75506 76 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 ERC2-IT1O76042 136 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 CRYGAP11844 174 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 RPL13AP40429 203 aaKnown RBP2.28□□□□□ -2.04
DDX42-211ENST00000580108 NPC2P61916 151 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 MEIG1Q5JSS6 88 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 BOD1L2Q8IYS8 172 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 MIR7-3HGQ8N6C7 128 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 CHCHD1Q96BP2 118 aaKnown RBP2.28□□□□□ -2.04
DDX42-211ENST00000580108 PLEKHB2Q96CS7 222 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
DDX42-211ENST00000580108 TRBV10-3A0A0K0K1G6 114 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 COLCA2A8K830 154 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 HERV-K104P63124 156 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 SOSTDC1Q6X4U4 206 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 SMCR5Q8TEV8 140 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 SPRR4Q96PI1 79 aa2.27□□□□□ -2.05
DDX42-211ENST00000580108 IGKV2D-26A0A0A0MRZ7 120 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 KRTAP4-16G5E9R7 235 aaPredicted RBP2.26□□□□□ -2.05
DDX42-211ENST00000580108 LEPROTO15243 131 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 S100A6P06703 90 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 S100A12P80511 92 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 COX17Q14061 63 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 ADAMTSL4-AS1Q5T5F5 129 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 Q6ZVQ6 151 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 TTTY13Q9BZ97 58 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
DDX42-211ENST00000580108 MYMXA0A1B0GTQ4 84 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 ETDCA0A1B0GVM5 59 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 J3QQQ9 107 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 DPM2O94777 84 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 IGKCP01834 107 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 SPRR1AP35321 89 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 Q8NBF4 154 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 Q9BRP9 147 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 KCNQ1DNQ9H478 68 aa2.25□□□□□ -2.05
DDX42-211ENST00000580108 IGLV7-46A0A075B6I9 117 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 A0A0J9YXY3 114 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BKO60814 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BJP06899 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BOP23527 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 DDTP30046 118 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BBP33778 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BDP58876 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BCP62807 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 MOBPQ13875 183 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST2H2BEQ16778 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.24□□□□□ -2.05
DDX42-211ENST00000580108 ST20-AS1Q8NBB2 130 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BHQ93079 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BNQ99877 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 HIST1H2BMQ99879 126 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 KRTAP4-1Q9BYQ7 146 aa2.24□□□□□ -2.05
DDX42-211ENST00000580108 LGALS3P17931 250 aaKnown RBP2.23□□□□□ -2.05
DDX42-211ENST00000580108 PLNP26678 52 aa2.23□□□□□ -2.05
DDX42-211ENST00000580108 SFTA2Q6UW10 78 aa2.23□□□□□ -2.05
DDX42-211ENST00000580108 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
DDX42-211ENST00000580108 LINC00518Q8N0U6 118 aa2.23□□□□□ -2.05
DDX42-211ENST00000580108 LINC00337Q8N6G1 96 aa2.23□□□□□ -2.05
DDX42-211ENST00000580108 HSPB8Q9UJY1 196 aa2.23□□□□□ -2.05
DDX42-211ENST00000580108 LOC107984156A0A0G2JMH3 177 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 A0A0G2JQZ4 141 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 E9PLD3 99 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 SYS1-DBNDD2H3BUS1 97 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 HERVK_113P61574 105 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 LINC00483Q53H64 154 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 S100A7L2Q5SY68 101 aa2.22□□□□□ -2.05
DDX42-211ENST00000580108 LINC01545Q5VT33 79 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms