RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PLAC8Q9NZF1 115 aa15.13■□□□□ 0.01
ATPAF1-213ENST00000574428 IGLV6-57P01721 117 aa15.12■□□□□ 0.01
ATPAF1-213ENST00000574428 RPL28P46779 137 aaKnown RBP15.12■□□□□ 0.01
ATPAF1-213ENST00000574428 RPL37AP8A6NKH3 93 aa15.11■□□□□ 0.01
ATPAF1-213ENST00000574428 HAMPP81172 84 aa15.11■□□□□ 0.01
ATPAF1-213ENST00000574428 SMIM11BQ8TCY0 68 aa15.11■□□□□ 0.01
ATPAF1-213ENST00000574428 TMEM126AQ9H061 195 aa15.11■□□□□ 0.01
ATPAF1-213ENST00000574428 EPM2AB3EWF7 344 aa15.11■□□□□ 0.01
ATPAF1-213ENST00000574428 LST1O00453 97 aa15.1■□□□□ 0.01
ATPAF1-213ENST00000574428 C9JAW5 83 aa15.09■□□□□ 0.01
ATPAF1-213ENST00000574428 SCXQ7RTU7 201 aa15.09■□□□□ 0.01
ATPAF1-213ENST00000574428 DNAH8Q96JB1 4490 aa15.09■□□□□ 0.01
ATPAF1-213ENST00000574428 OCIAD2Q56VL3 154 aa15.08■□□□□ 0.01
ATPAF1-213ENST00000574428 CIRBP-AS1Q8TBR5 109 aa15.08■□□□□ 0.01
ATPAF1-213ENST00000574428 ETDBQ3ZM63 59 aa15.06■□□□□ 0
ATPAF1-213ENST00000574428 IGLV1-50A0A075B6I6 118 aa15.06■□□□□ 0
ATPAF1-213ENST00000574428 SLC25A20O43772 301 aa15.05■□□□□ -0
ATPAF1-213ENST00000574428 DYNC1H1Q14204 4646 aaKnown RBP15.05■□□□□ -0
ATPAF1-213ENST00000574428 TRAV23DV6A0A075B6W5 121 aa15.04■□□□□ -0
ATPAF1-213ENST00000574428 UBE2BP63146 152 aa15.04■□□□□ -0
ATPAF1-213ENST00000574428 LRP1BQ9NZR2 4599 aa15.04■□□□□ -0
ATPAF1-213ENST00000574428 KRTAP11-1Q8IUC1 163 aa15.03■□□□□ -0
ATPAF1-213ENST00000574428 FAM218AQ96MZ4 157 aa15.02□□□□□ -0.01
ATPAF1-213ENST00000574428 KCNQ1DNQ9H478 68 aa15.01□□□□□ -0.01
ATPAF1-213ENST00000574428 K7ERU9 68 aa14.98□□□□□ -0.01
ATPAF1-213ENST00000574428 ANKRD29Q8N6D5 301 aa14.98□□□□□ -0.01
ATPAF1-213ENST00000574428 PRYO14603 147 aa14.98□□□□□ -0.01
ATPAF1-213ENST00000574428 ZNF73O43830 326 aaPredicted RBP14.98□□□□□ -0.01
ATPAF1-213ENST00000574428 C6orf99Q4VX62 202 aa14.98□□□□□ -0.01
ATPAF1-213ENST00000574428 LINC01600Q96MT4 127 aa14.97□□□□□ -0.01
ATPAF1-213ENST00000574428 TRACP01848 142 aa14.96□□□□□ -0.01
ATPAF1-213ENST00000574428 TEN1Q86WV5 123 aa14.96□□□□□ -0.01
ATPAF1-213ENST00000574428 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.01
ATPAF1-213ENST00000574428 H0YGX0 51 aa14.96□□□□□ -0.02
ATPAF1-213ENST00000574428 XGP55808 180 aa14.95□□□□□ -0.02
ATPAF1-213ENST00000574428 REG3GQ6UW15 175 aa14.94□□□□□ -0.02
ATPAF1-213ENST00000574428 DIRC1Q969H9 104 aa14.94□□□□□ -0.02
ATPAF1-213ENST00000574428 H3BT86 120 aa14.93□□□□□ -0.02
ATPAF1-213ENST00000574428 SPRR1AP35321 89 aa14.91□□□□□ -0.02
ATPAF1-213ENST00000574428 PSORS1C2Q9UIG4 136 aa14.89□□□□□ -0.03
ATPAF1-213ENST00000574428 KRTAP4-16G5E9R7 235 aaPredicted RBP14.88□□□□□ -0.03
ATPAF1-213ENST00000574428 PPDPFLQ8WWR9 84 aa14.88□□□□□ -0.03
ATPAF1-213ENST00000574428 EPPK1P58107 5090 aaKnown RBP14.87□□□□□ -0.03
ATPAF1-213ENST00000574428 ETDCA0A1B0GVM5 59 aa14.87□□□□□ -0.03
ATPAF1-213ENST00000574428 APOBP04114 4563 aaKnown RBP14.87□□□□□ -0.03
ATPAF1-213ENST00000574428 COX7BP24311 80 aa14.86□□□□□ -0.03
ATPAF1-213ENST00000574428 ELOF1P60002 83 aaKnown RBP14.85□□□□□ -0.03
ATPAF1-213ENST00000574428 TRBV7-6A0A0J9YX20 115 aa14.84□□□□□ -0.03
ATPAF1-213ENST00000574428 FAM19A1Q7Z5A9 133 aa14.84□□□□□ -0.03
ATPAF1-213ENST00000574428 B5MCH6 92 aa14.83□□□□□ -0.03
ATPAF1-213ENST00000574428 J3QR89 54 aa14.83□□□□□ -0.03
ATPAF1-213ENST00000574428 DNAL4O96015 105 aa14.83□□□□□ -0.03
ATPAF1-213ENST00000574428 BCE1O60756 84 aa14.83□□□□□ -0.04
ATPAF1-213ENST00000574428 C1orf137Q5JT78 98 aa14.83□□□□□ -0.04
ATPAF1-213ENST00000574428 SMR3BP02814 79 aaPredicted RBP14.82□□□□□ -0.04
ATPAF1-213ENST00000574428 BAALC-AS2P0C853 105 aa14.82□□□□□ -0.04
ATPAF1-213ENST00000574428 PRLHP81277 87 aa14.82□□□□□ -0.04
ATPAF1-213ENST00000574428 Q6ZRX8 168 aa14.81□□□□□ -0.04
ATPAF1-213ENST00000574428 LINC00528Q8N1L1 170 aa14.81□□□□□ -0.04
ATPAF1-213ENST00000574428 TEX49A0A1B0GTD5 131 aa14.8□□□□□ -0.04
ATPAF1-213ENST00000574428 A0A1B0GX51 115 aa14.79□□□□□ -0.04
ATPAF1-213ENST00000574428 CDK2AP2O75956 126 aa14.78□□□□□ -0.04
ATPAF1-213ENST00000574428 UBE2AP49459 152 aa14.78□□□□□ -0.04
ATPAF1-213ENST00000574428 LINC00575Q6W349 94 aa14.78□□□□□ -0.04
ATPAF1-213ENST00000574428 VPS25Q9BRG1 176 aa14.77□□□□□ -0.05
ATPAF1-213ENST00000574428 Q9BRP9 147 aa14.77□□□□□ -0.05
ATPAF1-213ENST00000574428 KRTAP13-1Q8IUC0 172 aa14.74□□□□□ -0.05
ATPAF1-213ENST00000574428 H0Y9J4 135 aa14.72□□□□□ -0.05
ATPAF1-213ENST00000574428 SMCR5Q8TEV8 140 aa14.72□□□□□ -0.05
ATPAF1-213ENST00000574428 HIGD2AQ9BW72 106 aa14.72□□□□□ -0.05
ATPAF1-213ENST00000574428 ORMDL1Q9P0S3 153 aa14.72□□□□□ -0.05
ATPAF1-213ENST00000574428 hADV29S1A0JD25 119 aa14.71□□□□□ -0.05
ATPAF1-213ENST00000574428 IGLV7-43P04211 117 aa14.71□□□□□ -0.05
ATPAF1-213ENST00000574428 RPL37AP61513 92 aaKnown RBP14.7□□□□□ -0.06
ATPAF1-213ENST00000574428 DHRS4-AS1Q9P1J3 65 aa14.7□□□□□ -0.06
ATPAF1-213ENST00000574428 SNCGO76070 127 aa14.7□□□□□ -0.06
ATPAF1-213ENST00000574428 ERC2-IT1O76042 136 aa14.69□□□□□ -0.06
ATPAF1-213ENST00000574428 INAFM2P0DMQ5 153 aa14.69□□□□□ -0.06
ATPAF1-213ENST00000574428 ZNF861PO60384 105 aa14.66□□□□□ -0.06
ATPAF1-213ENST00000574428 VPS13BQ7Z7G8 4022 aa14.64□□□□□ -0.07
ATPAF1-213ENST00000574428 HSPG2P98160 4391 aa14.64□□□□□ -0.07
ATPAF1-213ENST00000574428 Q6ZQY7 126 aa14.64□□□□□ -0.07
ATPAF1-213ENST00000574428 SRRM2Q9UQ35 2752 aaKnown RBP14.63□□□□□ -0.07
ATPAF1-213ENST00000574428 RYR1P21817 5038 aa14.62□□□□□ -0.07
ATPAF1-213ENST00000574428 ST20-AS1Q8NBB2 130 aa14.62□□□□□ -0.07
ATPAF1-213ENST00000574428 KIAA1109Q2LD37 5005 aa14.61□□□□□ -0.07
ATPAF1-213ENST00000574428 TMEM256-PLSCR3K7ERE1 68 aa14.6□□□□□ -0.07
ATPAF1-213ENST00000574428 OBSCN-AS1Q96MR7 158 aa14.6□□□□□ -0.07
ATPAF1-213ENST00000574428 CDIP1Q9H305 208 aa14.6□□□□□ -0.07
ATPAF1-213ENST00000574428 FAT1Q14517 4588 aa14.59□□□□□ -0.07
ATPAF1-213ENST00000574428 KRTAP10-4P60372 401 aaPredicted RBP14.59□□□□□ -0.07
ATPAF1-213ENST00000574428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.59□□□□□ -0.07
ATPAF1-213ENST00000574428 FAM229AH3BQW9 127 aa14.57□□□□□ -0.08
ATPAF1-213ENST00000574428 DEFB105AQ8NG35 78 aa14.57□□□□□ -0.08
ATPAF1-213ENST00000574428 Q5VSD8 79 aa14.55□□□□□ -0.08
ATPAF1-213ENST00000574428 KRTAP17-1Q9BYP8 105 aa14.55□□□□□ -0.08
ATPAF1-213ENST00000574428 C14orf132Q9NPU4 83 aa14.54□□□□□ -0.08
ATPAF1-213ENST00000574428 A0A1B0GV72 72 aa14.53□□□□□ -0.08
ATPAF1-213ENST00000574428 PLA2G1BP04054 148 aaKnown RBP14.52□□□□□ -0.08
ATPAF1-213ENST00000574428 FAM240AA0A1B0GVK7 77 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms