RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SPATA45Q537H7 98 aa10.28□□□□□ -0.76
COMMD4-220ENST00000567720 PYY3Q5JQD4 70 aa10.28□□□□□ -0.76
COMMD4-220ENST00000567720 VAMP8Q9BV40 100 aa10.28□□□□□ -0.76
COMMD4-220ENST00000567720 HMCN2Q8NDA2 5059 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 S100A12P80511 92 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 MUSTN1Q8IVN3 82 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 HIGD2AQ9BW72 106 aa10.27□□□□□ -0.77
COMMD4-220ENST00000567720 B5MCH6 92 aa10.25□□□□□ -0.77
COMMD4-220ENST00000567720 A0A087X002 238 aa10.24□□□□□ -0.77
COMMD4-220ENST00000567720 DLEU1O43261 78 aa10.24□□□□□ -0.77
COMMD4-220ENST00000567720 ZNF73O43830 326 aaPredicted RBP10.24□□□□□ -0.77
COMMD4-220ENST00000567720 OR13C6PQ8NH95 151 aa10.24□□□□□ -0.77
COMMD4-220ENST00000567720 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
COMMD4-220ENST00000567720 C14orf144Q96I85 54 aa10.24□□□□□ -0.77
COMMD4-220ENST00000567720 Q6ZRX8 168 aa10.23□□□□□ -0.77
COMMD4-220ENST00000567720 LINC00518Q8N0U6 118 aa10.23□□□□□ -0.77
COMMD4-220ENST00000567720 ANAPC11Q9NYG5 84 aa10.22□□□□□ -0.77
COMMD4-220ENST00000567720 Q9BRP9 147 aa10.21□□□□□ -0.77
COMMD4-220ENST00000567720 RPL13AP40429 203 aaKnown RBP10.19□□□□□ -0.78
COMMD4-220ENST00000567720 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
COMMD4-220ENST00000567720 SPRR4Q96PI1 79 aa10.19□□□□□ -0.78
COMMD4-220ENST00000567720 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
COMMD4-220ENST00000567720 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
COMMD4-220ENST00000567720 KRTAP13-2Q52LG2 175 aa10.18□□□□□ -0.78
COMMD4-220ENST00000567720 SLC25A34Q6PIV7 304 aa10.18□□□□□ -0.78
COMMD4-220ENST00000567720 A4D1N5 150 aa10.17□□□□□ -0.78
COMMD4-220ENST00000567720 FAM229BQ4G0N7 80 aa10.17□□□□□ -0.78
COMMD4-220ENST00000567720 A6NDN8 102 aa10.16□□□□□ -0.78
COMMD4-220ENST00000567720 CRYGAP11844 174 aa10.16□□□□□ -0.78
COMMD4-220ENST00000567720 C6orf99Q4VX62 202 aa10.16□□□□□ -0.78
COMMD4-220ENST00000567720 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
COMMD4-220ENST00000567720 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
COMMD4-220ENST00000567720 ZNF706Q9Y5V0 76 aaPredicted RBP10.15□□□□□ -0.78
COMMD4-220ENST00000567720 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
COMMD4-220ENST00000567720 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
COMMD4-220ENST00000567720 C12orf57Q99622 126 aa10.13□□□□□ -0.79
COMMD4-220ENST00000567720 COX7BP24311 80 aa10.11□□□□□ -0.79
COMMD4-220ENST00000567720 HINT1P49773 126 aaPredicted RBP10.11□□□□□ -0.79
COMMD4-220ENST00000567720 LINC00483Q53H64 154 aa10.11□□□□□ -0.79
COMMD4-220ENST00000567720 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
COMMD4-220ENST00000567720 TYMSOSQ8TAI1 123 aa10.11□□□□□ -0.79
COMMD4-220ENST00000567720 SMIM11BQ8TCY0 68 aa10.1□□□□□ -0.79
COMMD4-220ENST00000567720 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
COMMD4-220ENST00000567720 GAGE2AQ6NT46 116 aa10.08□□□□□ -0.8
COMMD4-220ENST00000567720 ST20-AS1Q8NBB2 130 aa10.08□□□□□ -0.8
COMMD4-220ENST00000567720 A0A1B0GWB2 263 aa10.07□□□□□ -0.8
COMMD4-220ENST00000567720 DHRS4-AS1Q9P1J3 65 aa10.07□□□□□ -0.8
COMMD4-220ENST00000567720 TAL2Q16559 108 aa10.06□□□□□ -0.8
COMMD4-220ENST00000567720 CEND1Q8N111 149 aa10.05□□□□□ -0.8
COMMD4-220ENST00000567720 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
COMMD4-220ENST00000567720 CFC1P0CG37 223 aa10.04□□□□□ -0.8
COMMD4-220ENST00000567720 FXYD2P54710 66 aa10.03□□□□□ -0.8
COMMD4-220ENST00000567720 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
COMMD4-220ENST00000567720 LINC00304Q8N9R0 145 aa10.02□□□□□ -0.81
COMMD4-220ENST00000567720 UQCR10Q9UDW1 63 aa10.02□□□□□ -0.81
COMMD4-220ENST00000567720 SMIM6P0DI80 62 aa10.01□□□□□ -0.81
COMMD4-220ENST00000567720 HSD52Q0P140 79 aa10.01□□□□□ -0.81
COMMD4-220ENST00000567720 IGLV9-49A0A0B4J1Y8 123 aa9.99□□□□□ -0.81
COMMD4-220ENST00000567720 SPRR1BP22528 89 aa9.99□□□□□ -0.81
COMMD4-220ENST00000567720 LRP2P98164 4655 aa9.99□□□□□ -0.81
COMMD4-220ENST00000567720 MOBPQ13875 183 aa9.99□□□□□ -0.81
COMMD4-220ENST00000567720 RAB37Q96AX2 223 aa9.99□□□□□ -0.81
COMMD4-220ENST00000567720 TMEM238LA0A1B0GVL6 79 aa9.98□□□□□ -0.81
COMMD4-220ENST00000567720 A6NJY4 79 aa9.98□□□□□ -0.81
COMMD4-220ENST00000567720 H7C2G1 150 aa9.98□□□□□ -0.81
COMMD4-220ENST00000567720 TSPAN13O95857 204 aa9.98□□□□□ -0.81
COMMD4-220ENST00000567720 Q8NBF4 154 aa9.97□□□□□ -0.81
COMMD4-220ENST00000567720 LOC105371267A0A1B0GV96 52 aa9.96□□□□□ -0.82
COMMD4-220ENST00000567720 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
COMMD4-220ENST00000567720 PRO1933Q9H354 126 aa9.96□□□□□ -0.82
COMMD4-220ENST00000567720 VAMP3Q15836 100 aa9.95□□□□□ -0.82
COMMD4-220ENST00000567720 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
COMMD4-220ENST00000567720 NHP2Q9NX24 153 aaKnown RBP9.95□□□□□ -0.82
COMMD4-220ENST00000567720 UBR4Q5T4S7 5183 aa9.95□□□□□ -0.82
COMMD4-220ENST00000567720 LPAP08519 4548 aa9.94□□□□□ -0.82
COMMD4-220ENST00000567720 IGLV5-48A0A075B6I7 105 aa9.94□□□□□ -0.82
COMMD4-220ENST00000567720 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
COMMD4-220ENST00000567720 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
COMMD4-220ENST00000567720 DEFB105AQ8NG35 78 aa9.93□□□□□ -0.82
COMMD4-220ENST00000567720 K7ERJ3 54 aa9.92□□□□□ -0.82
COMMD4-220ENST00000567720 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
COMMD4-220ENST00000567720 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
COMMD4-220ENST00000567720 SLC25A20O43772 301 aa9.91□□□□□ -0.82
COMMD4-220ENST00000567720 Q1RN00 199 aa9.91□□□□□ -0.82
COMMD4-220ENST00000567720 Q6ZQY7 126 aa9.9□□□□□ -0.82
COMMD4-220ENST00000567720 SMIM29Q86T20 159 aa9.9□□□□□ -0.82
COMMD4-220ENST00000567720 hADV29S1A0JD25 119 aa9.89□□□□□ -0.83
COMMD4-220ENST00000567720 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
COMMD4-220ENST00000567720 SSBP3-AS1Q7Z2R9 100 aa9.89□□□□□ -0.83
COMMD4-220ENST00000567720 Q8N377 158 aa9.88□□□□□ -0.83
COMMD4-220ENST00000567720 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
COMMD4-220ENST00000567720 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
COMMD4-220ENST00000567720 CTAG1AP78358 180 aa9.87□□□□□ -0.83
COMMD4-220ENST00000567720 FAM218AQ96MZ4 157 aa9.87□□□□□ -0.83
COMMD4-220ENST00000567720 TRIAP1O43715 76 aa9.86□□□□□ -0.83
COMMD4-220ENST00000567720 PRR4Q16378 134 aa9.85□□□□□ -0.83
COMMD4-220ENST00000567720 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
COMMD4-220ENST00000567720 SPINK1P00995 79 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms