RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
CDH1-209ENST00000566510 NOTCH1P46531 2555 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 TM2D3Q9BRN9 247 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 RMI2Q96E14 147 aa9.33□□□□□ -0.92
CDH1-209ENST00000566510 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
CDH1-209ENST00000566510 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
CDH1-209ENST00000566510 BCE1O60756 84 aa9.32□□□□□ -0.92
CDH1-209ENST00000566510 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
CDH1-209ENST00000566510 NREPQ16612 68 aa9.32□□□□□ -0.92
CDH1-209ENST00000566510 C7orf33Q8WU49 177 aa9.31□□□□□ -0.92
CDH1-209ENST00000566510 F8P00451 2351 aa9.31□□□□□ -0.92
CDH1-209ENST00000566510 H7BZZ5 65 aa9.31□□□□□ -0.92
CDH1-209ENST00000566510 MAST4O15021 2626 aa9.3□□□□□ -0.92
CDH1-209ENST00000566510 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
CDH1-209ENST00000566510 BPY2O14599 106 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 FBN1P35555 2871 aaKnown RBP9.28□□□□□ -0.92
CDH1-209ENST00000566510 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 F8WEM9 126 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 KLKP1Q107X0 134 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 BAHCC1Q9P281 2608 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 Q8N377 158 aa9.28□□□□□ -0.92
CDH1-209ENST00000566510 C4orf26Q17RF5 130 aa9.27□□□□□ -0.93
CDH1-209ENST00000566510 C5orf47Q569G3 176 aa9.25□□□□□ -0.93
CDH1-209ENST00000566510 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
CDH1-209ENST00000566510 ETDCA0A1B0GVM5 59 aa9.24□□□□□ -0.93
CDH1-209ENST00000566510 F8WDY8 70 aa9.24□□□□□ -0.93
CDH1-209ENST00000566510 IGKV4-1P06312 121 aa9.24□□□□□ -0.93
CDH1-209ENST00000566510 DNAH10OSP0CZ25 163 aa9.23□□□□□ -0.93
CDH1-209ENST00000566510 Q6ZRX8 168 aa9.23□□□□□ -0.93
CDH1-209ENST00000566510 FUSP35637 526 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH1-209ENST00000566510 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
CDH1-209ENST00000566510 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
CDH1-209ENST00000566510 DHRS4-AS1Q9P1J3 65 aa9.22□□□□□ -0.93
CDH1-209ENST00000566510 Q9BRP9 147 aa9.22□□□□□ -0.93
CDH1-209ENST00000566510 Q5XG85 94 aa9.21□□□□□ -0.93
CDH1-209ENST00000566510 MRAPQ8TCY5 172 aa9.21□□□□□ -0.93
CDH1-209ENST00000566510 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.94
CDH1-209ENST00000566510 TMEM254Q8TBM7 123 aa9.21□□□□□ -0.94
CDH1-209ENST00000566510 LINC00588Q9Y4M8 146 aa9.21□□□□□ -0.94
CDH1-209ENST00000566510 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
CDH1-209ENST00000566510 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
CDH1-209ENST00000566510 IGLV5-48A0A075B6I7 105 aa9.2□□□□□ -0.94
CDH1-209ENST00000566510 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
CDH1-209ENST00000566510 NBEAL1Q6ZS30 2694 aa9.19□□□□□ -0.94
CDH1-209ENST00000566510 COL6A5A8TX70 2615 aa9.19□□□□□ -0.94
CDH1-209ENST00000566510 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
CDH1-209ENST00000566510 UBE2BP63146 152 aa9.18□□□□□ -0.94
CDH1-209ENST00000566510 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
CDH1-209ENST00000566510 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
CDH1-209ENST00000566510 PRYO14603 147 aa9.17□□□□□ -0.94
CDH1-209ENST00000566510 NDUFC1O43677 76 aa9.17□□□□□ -0.94
CDH1-209ENST00000566510 MRPL55Q7Z7F7 128 aaKnown RBP9.17□□□□□ -0.94
CDH1-209ENST00000566510 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
CDH1-209ENST00000566510 ERC2-IT1O76042 136 aa9.16□□□□□ -0.94
CDH1-209ENST00000566510 CMYA5Q8N3K9 4069 aa9.16□□□□□ -0.94
CDH1-209ENST00000566510 KRTAP7-1Q8IUC3 87 aa9.16□□□□□ -0.94
CDH1-209ENST00000566510 PLA2G2DQ9UNK4 145 aa9.16□□□□□ -0.94
CDH1-209ENST00000566510 OCR1Q9BZK8 76 aa9.15□□□□□ -0.95
CDH1-209ENST00000566510 FAM30AQ9NZY2 134 aa9.14□□□□□ -0.95
CDH1-209ENST00000566510 SMIM29Q86T20 159 aa9.13□□□□□ -0.95
CDH1-209ENST00000566510 SPRR1AP35321 89 aa9.12□□□□□ -0.95
CDH1-209ENST00000566510 HIGD2AQ9BW72 106 aa9.12□□□□□ -0.95
CDH1-209ENST00000566510 Q8NBF4 154 aa9.12□□□□□ -0.95
CDH1-209ENST00000566510 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
CDH1-209ENST00000566510 A0A0G2JQZ4 141 aa9.11□□□□□ -0.95
CDH1-209ENST00000566510 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
CDH1-209ENST00000566510 TNP2Q05952 138 aa9.1□□□□□ -0.95
CDH1-209ENST00000566510 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
CDH1-209ENST00000566510 IGKV2-24A0A0C4DH68 120 aa9.1□□□□□ -0.95
CDH1-209ENST00000566510 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
CDH1-209ENST00000566510 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
CDH1-209ENST00000566510 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
CDH1-209ENST00000566510 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
CDH1-209ENST00000566510 A0A1B0GW54 56 aa9.07□□□□□ -0.96
CDH1-209ENST00000566510 LYSTQ99698 3801 aa9.07□□□□□ -0.96
CDH1-209ENST00000566510 ATP5EP56381 51 aaPredicted RBP9.07□□□□□ -0.96
CDH1-209ENST00000566510 PRLHP81277 87 aa9.07□□□□□ -0.96
CDH1-209ENST00000566510 K7EQZ3 153 aa9.06□□□□□ -0.96
CDH1-209ENST00000566510 DEFB116Q30KQ4 102 aa9.06□□□□□ -0.96
CDH1-209ENST00000566510 FP248Q71RG6 208 aaPredicted RBP9.06□□□□□ -0.96
CDH1-209ENST00000566510 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
CDH1-209ENST00000566510 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
CDH1-209ENST00000566510 DSCR10P59022 87 aa9.05□□□□□ -0.96
CDH1-209ENST00000566510 SRRM2Q9UQ35 2752 aaKnown RBP9.04□□□□□ -0.96
CDH1-209ENST00000566510 PSCAO43653 123 aa9.04□□□□□ -0.96
CDH1-209ENST00000566510 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
CDH1-209ENST00000566510 A0A096LNI7 61 aa9.03□□□□□ -0.96
CDH1-209ENST00000566510 MGAM2Q2M2H8 2515 aa9.02□□□□□ -0.97
CDH1-209ENST00000566510 DNAH3Q8TD57 4116 aa9.02□□□□□ -0.97
CDH1-209ENST00000566510 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.02□□□□□ -0.97
CDH1-209ENST00000566510 DNAH1Q9P2D7 4330 aa9.02□□□□□ -0.97
CDH1-209ENST00000566510 STAB2Q8WWQ8 2551 aa9.01□□□□□ -0.97
CDH1-209ENST00000566510 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
CDH1-209ENST00000566510 MPLKIPQ8TAP9 179 aa9.01□□□□□ -0.97
CDH1-209ENST00000566510 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
CDH1-209ENST00000566510 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
CDH1-209ENST00000566510 TENM2Q9NT68 2774 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms