RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TRACP01848 142 aa8.21□□□□□ -1.1
SPG7-209ENST00000564047 CHTF8P0CG12 524 aa8.21□□□□□ -1.1
SPG7-209ENST00000564047 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
SPG7-209ENST00000564047 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
SPG7-209ENST00000564047 CLEC2BQ92478 149 aa8.21□□□□□ -1.1
SPG7-209ENST00000564047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.21□□□□□ -1.1
SPG7-209ENST00000564047 IGKV2-28A0A075B6P5 120 aa8.2□□□□□ -1.1
SPG7-209ENST00000564047 PANO1I0J062 215 aa8.2□□□□□ -1.1
SPG7-209ENST00000564047 IGKV2D-28P01615 120 aa8.2□□□□□ -1.1
SPG7-209ENST00000564047 Q8N1X5 172 aa8.2□□□□□ -1.1
SPG7-209ENST00000564047 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
SPG7-209ENST00000564047 PCP4P48539 62 aa8.19□□□□□ -1.1
SPG7-209ENST00000564047 VPREB1P12018 145 aa8.18□□□□□ -1.1
SPG7-209ENST00000564047 Q6ZSA8 131 aa8.18□□□□□ -1.1
SPG7-209ENST00000564047 Q8NDZ9 215 aa8.18□□□□□ -1.1
SPG7-209ENST00000564047 DPH3Q96FX2 82 aa8.18□□□□□ -1.1
SPG7-209ENST00000564047 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
SPG7-209ENST00000564047 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
SPG7-209ENST00000564047 IGLV5-37A0A075B6J1 123 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 A0A1W2PNN7 141 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 FAM168BA1KXE4 195 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 H0YGX0 51 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
SPG7-209ENST00000564047 EPM2AB3EWF7 344 aa8.16□□□□□ -1.1
SPG7-209ENST00000564047 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
SPG7-209ENST00000564047 FAM30AQ9NZY2 134 aa8.16□□□□□ -1.1
SPG7-209ENST00000564047 A0A087WYN8 130 aa8.15□□□□□ -1.1
SPG7-209ENST00000564047 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
SPG7-209ENST00000564047 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.1
SPG7-209ENST00000564047 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
SPG7-209ENST00000564047 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
SPG7-209ENST00000564047 C22orf24Q9Y442 160 aa8.15□□□□□ -1.1
SPG7-209ENST00000564047 M0R378 163 aa8.14□□□□□ -1.11
SPG7-209ENST00000564047 SMIM11BQ8TCY0 68 aa8.14□□□□□ -1.11
SPG7-209ENST00000564047 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
SPG7-209ENST00000564047 DNAH8Q96JB1 4490 aa8.14□□□□□ -1.11
SPG7-209ENST00000564047 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
SPG7-209ENST00000564047 NCR3O14931 201 aa8.13□□□□□ -1.11
SPG7-209ENST00000564047 A0A1B0GX51 115 aa8.12□□□□□ -1.11
SPG7-209ENST00000564047 MRPL55Q7Z7F7 128 aaKnown RBP8.12□□□□□ -1.11
SPG7-209ENST00000564047 UBR4Q5T4S7 5183 aa8.12□□□□□ -1.11
SPG7-209ENST00000564047 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
SPG7-209ENST00000564047 FAT1Q14517 4588 aa8.1□□□□□ -1.11
SPG7-209ENST00000564047 S100A7L2Q5SY68 101 aa8.1□□□□□ -1.11
SPG7-209ENST00000564047 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
SPG7-209ENST00000564047 LINC00167Q96N53 147 aa8.1□□□□□ -1.11
SPG7-209ENST00000564047 TMEM126AQ9H061 195 aa8.1□□□□□ -1.11
SPG7-209ENST00000564047 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
SPG7-209ENST00000564047 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
SPG7-209ENST00000564047 PHF5AQ7RTV0 110 aaKnown RBP8.09□□□□□ -1.11
SPG7-209ENST00000564047 DNAL4O96015 105 aa8.08□□□□□ -1.12
SPG7-209ENST00000564047 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
SPG7-209ENST00000564047 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
SPG7-209ENST00000564047 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
SPG7-209ENST00000564047 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
SPG7-209ENST00000564047 ACYP1P07311 99 aa8.06□□□□□ -1.12
SPG7-209ENST00000564047 INAFM2P0DMQ5 153 aa8.06□□□□□ -1.12
SPG7-209ENST00000564047 XGP55808 180 aa8.06□□□□□ -1.12
SPG7-209ENST00000564047 UBE2BP63146 152 aa8.06□□□□□ -1.12
SPG7-209ENST00000564047 RPL37AP8A6NKH3 93 aa8.05□□□□□ -1.12
SPG7-209ENST00000564047 HAMPP81172 84 aa8.05□□□□□ -1.12
SPG7-209ENST00000564047 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
SPG7-209ENST00000564047 TRAV23DV6A0A075B6W5 121 aa8.04□□□□□ -1.12
SPG7-209ENST00000564047 PRYO14603 147 aa8.04□□□□□ -1.12
SPG7-209ENST00000564047 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
SPG7-209ENST00000564047 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
SPG7-209ENST00000564047 FLG2Q5D862 2391 aaPredicted RBP8.03□□□□□ -1.12
SPG7-209ENST00000564047 SNCGO76070 127 aa8.02□□□□□ -1.13
SPG7-209ENST00000564047 MT-ATP8P03928 68 aa8.02□□□□□ -1.13
SPG7-209ENST00000564047 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
SPG7-209ENST00000564047 SPRR1AP35321 89 aa8.01□□□□□ -1.13
SPG7-209ENST00000564047 REG3GQ6UW15 175 aa8.01□□□□□ -1.13
SPG7-209ENST00000564047 OBSCN-AS1Q96MR7 158 aa8.01□□□□□ -1.13
SPG7-209ENST00000564047 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
SPG7-209ENST00000564047 ZNF73O43830 326 aaPredicted RBP8□□□□□ -1.13
SPG7-209ENST00000564047 Q6Q795 121 aa8□□□□□ -1.13
SPG7-209ENST00000564047 H3BQ85 93 aa7.99□□□□□ -1.13
SPG7-209ENST00000564047 C6orf99Q4VX62 202 aa7.99□□□□□ -1.13
SPG7-209ENST00000564047 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
SPG7-209ENST00000564047 PSORS1C2Q9UIG4 136 aa7.98□□□□□ -1.13
SPG7-209ENST00000564047 TRBV7-6A0A0J9YX20 115 aa7.97□□□□□ -1.13
SPG7-209ENST00000564047 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
SPG7-209ENST00000564047 BCE1O60756 84 aa7.97□□□□□ -1.13
SPG7-209ENST00000564047 LINC00575Q6W349 94 aa7.97□□□□□ -1.13
SPG7-209ENST00000564047 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
SPG7-209ENST00000564047 TMEM256-PLSCR3K7ERE1 68 aa7.96□□□□□ -1.14
SPG7-209ENST00000564047 JMJD7-PLA2G4BH0Y9G9 81 aa7.95□□□□□ -1.14
SPG7-209ENST00000564047 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
SPG7-209ENST00000564047 Q5VSD8 79 aa7.95□□□□□ -1.14
SPG7-209ENST00000564047 LINC00528Q8N1L1 170 aa7.95□□□□□ -1.14
SPG7-209ENST00000564047 B5MCH6 92 aa7.94□□□□□ -1.14
SPG7-209ENST00000564047 J3QL48 77 aa7.94□□□□□ -1.14
SPG7-209ENST00000564047 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
SPG7-209ENST00000564047 COX7BP24311 80 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms