RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 A0A087X002 238 aa9.8□□□□□ -0.84
CDT1-202ENST00000562747 HSBP1L1C9JCN9 74 aa9.8□□□□□ -0.84
CDT1-202ENST00000562747 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
CDT1-202ENST00000562747 COPS9Q8WXC6 57 aa9.79□□□□□ -0.84
CDT1-202ENST00000562747 CBY1Q9Y3M2 126 aa9.79□□□□□ -0.84
CDT1-202ENST00000562747 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
CDT1-202ENST00000562747 Q6ZVH6 145 aa9.78□□□□□ -0.84
CDT1-202ENST00000562747 PPDPFQ9H3Y8 114 aa9.78□□□□□ -0.84
CDT1-202ENST00000562747 ANAPC11Q9NYG5 84 aa9.78□□□□□ -0.84
CDT1-202ENST00000562747 B5MCH6 92 aa9.77□□□□□ -0.85
CDT1-202ENST00000562747 IFITM1P13164 125 aa9.77□□□□□ -0.85
CDT1-202ENST00000562747 TYMSOSQ8TAI1 123 aa9.77□□□□□ -0.85
CDT1-202ENST00000562747 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
CDT1-202ENST00000562747 LINC00518Q8N0U6 118 aa9.76□□□□□ -0.85
CDT1-202ENST00000562747 SCGB1D1O95968 90 aa9.75□□□□□ -0.85
CDT1-202ENST00000562747 SMCR5Q8TEV8 140 aa9.75□□□□□ -0.85
CDT1-202ENST00000562747 SPRR4Q96PI1 79 aa9.75□□□□□ -0.85
CDT1-202ENST00000562747 ZNF73O43830 326 aaPredicted RBP9.74□□□□□ -0.85
CDT1-202ENST00000562747 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
CDT1-202ENST00000562747 Q6ZRX8 168 aa9.74□□□□□ -0.85
CDT1-202ENST00000562747 OR13C6PQ8NH95 151 aa9.74□□□□□ -0.85
CDT1-202ENST00000562747 MUC2Q02817 5179 aa9.73□□□□□ -0.85
CDT1-202ENST00000562747 JOSD1Q15040 202 aaPredicted RBP9.72□□□□□ -0.85
CDT1-202ENST00000562747 HINT1P49773 126 aaPredicted RBP9.71□□□□□ -0.86
CDT1-202ENST00000562747 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
CDT1-202ENST00000562747 Q9BRP9 147 aa9.71□□□□□ -0.86
CDT1-202ENST00000562747 ERC2-IT1O76042 136 aa9.68□□□□□ -0.86
CDT1-202ENST00000562747 LINC00483Q53H64 154 aa9.67□□□□□ -0.86
CDT1-202ENST00000562747 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
CDT1-202ENST00000562747 LINC00304Q8N9R0 145 aa9.66□□□□□ -0.86
CDT1-202ENST00000562747 COX8AP10176 69 aa9.65□□□□□ -0.86
CDT1-202ENST00000562747 GAGE2AQ6NT46 116 aa9.64□□□□□ -0.87
CDT1-202ENST00000562747 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 A6NDN8 102 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 DLEU1O43261 78 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 TSPAN13O95857 204 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
CDT1-202ENST00000562747 CTAG1AP78358 180 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 C6orf99Q4VX62 202 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 DHRS4-AS1Q9P1J3 65 aa9.63□□□□□ -0.87
CDT1-202ENST00000562747 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
CDT1-202ENST00000562747 COX7BP24311 80 aa9.62□□□□□ -0.87
CDT1-202ENST00000562747 PRR4Q16378 134 aa9.61□□□□□ -0.87
CDT1-202ENST00000562747 KRTAP9-2Q9BYQ4 174 aa9.61□□□□□ -0.87
CDT1-202ENST00000562747 SPATA45Q537H7 98 aa9.6□□□□□ -0.87
CDT1-202ENST00000562747 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
CDT1-202ENST00000562747 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
CDT1-202ENST00000562747 SPAG11AQ6PDA7 123 aa9.59□□□□□ -0.87
CDT1-202ENST00000562747 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
CDT1-202ENST00000562747 A4D1N5 150 aa9.58□□□□□ -0.88
CDT1-202ENST00000562747 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
CDT1-202ENST00000562747 ST20-AS1Q8NBB2 130 aa9.57□□□□□ -0.88
CDT1-202ENST00000562747 C14orf144Q96I85 54 aa9.57□□□□□ -0.88
CDT1-202ENST00000562747 Q8NBF4 154 aa9.56□□□□□ -0.88
CDT1-202ENST00000562747 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 SLC25A34Q6PIV7 304 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 SSBP3-AS1Q7Z2R9 100 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 SMIM11BQ8TCY0 68 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 HIGD1BQ9P298 99 aa9.55□□□□□ -0.88
CDT1-202ENST00000562747 TMA7Q9Y2S6 64 aaKnown RBP9.55□□□□□ -0.88
CDT1-202ENST00000562747 SPRR1BP22528 89 aa9.54□□□□□ -0.88
CDT1-202ENST00000562747 MOBPQ13875 183 aa9.54□□□□□ -0.88
CDT1-202ENST00000562747 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
CDT1-202ENST00000562747 PYY3Q5JQD4 70 aa9.53□□□□□ -0.88
CDT1-202ENST00000562747 LCE2AQ5TA79 106 aaPredicted RBP9.51□□□□□ -0.89
CDT1-202ENST00000562747 NHP2Q9NX24 153 aaKnown RBP9.51□□□□□ -0.89
CDT1-202ENST00000562747 SPINK1P00995 79 aa9.5□□□□□ -0.89
CDT1-202ENST00000562747 VAMP3Q15836 100 aa9.5□□□□□ -0.89
CDT1-202ENST00000562747 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
CDT1-202ENST00000562747 C2orf91Q6ZV80 131 aa9.5□□□□□ -0.89
CDT1-202ENST00000562747 A0A0U1RQV1 116 aa9.49□□□□□ -0.89
CDT1-202ENST00000562747 TAL2Q16559 108 aa9.49□□□□□ -0.89
CDT1-202ENST00000562747 C12orf57Q99622 126 aa9.49□□□□□ -0.89
CDT1-202ENST00000562747 TEX49A0A1B0GTD5 131 aa9.48□□□□□ -0.89
CDT1-202ENST00000562747 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
CDT1-202ENST00000562747 RPS29P62273 56 aaKnown RBP9.47□□□□□ -0.89
CDT1-202ENST00000562747 RETNLBQ9BQ08 111 aa9.47□□□□□ -0.89
CDT1-202ENST00000562747 SLC25A20O43772 301 aa9.46□□□□□ -0.9
CDT1-202ENST00000562747 DEFB105AQ8NG35 78 aa9.46□□□□□ -0.9
CDT1-202ENST00000562747 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
CDT1-202ENST00000562747 CFC1BP0CG36 223 aa9.45□□□□□ -0.9
CDT1-202ENST00000562747 CFC1P0CG37 223 aa9.45□□□□□ -0.9
CDT1-202ENST00000562747 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
CDT1-202ENST00000562747 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
CDT1-202ENST00000562747 LINC00575Q6W349 94 aa9.44□□□□□ -0.9
CDT1-202ENST00000562747 CEND1Q8N111 149 aa9.44□□□□□ -0.9
CDT1-202ENST00000562747 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
CDT1-202ENST00000562747 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
CDT1-202ENST00000562747 RAB37Q96AX2 223 aa9.43□□□□□ -0.9
CDT1-202ENST00000562747 IGLV7-46A0A075B6I9 117 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 TMEM238LA0A1B0GVL6 79 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 A6NJY4 79 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 Q1RN00 199 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 FP248Q71RG6 208 aaPredicted RBP9.41□□□□□ -0.9
CDT1-202ENST00000562747 SMIM29Q86T20 159 aa9.41□□□□□ -0.9
CDT1-202ENST00000562747 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
CDT1-202ENST00000562747 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
CDT1-202ENST00000562747 Q8N377 158 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms