RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
TCF4-216ENST00000562680 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.6
TCF4-216ENST00000562680 hDV103S1A0JD37 113 aa5.08□□□□□ -1.6
TCF4-216ENST00000562680 K7ERS5 55 aa5.08□□□□□ -1.6
TCF4-216ENST00000562680 REV3LO60673 3130 aa5.08□□□□□ -1.6
TCF4-216ENST00000562680 LINC00575Q6W349 94 aa5.07□□□□□ -1.6
TCF4-216ENST00000562680 C22orf24Q9Y442 160 aa5.07□□□□□ -1.6
TCF4-216ENST00000562680 CFAP54Q96N23 3096 aa5.06□□□□□ -1.6
TCF4-216ENST00000562680 COL6A5A8TX70 2615 aa5.06□□□□□ -1.6
TCF4-216ENST00000562680 C16orf90A8MZG2 172 aa5.06□□□□□ -1.6
TCF4-216ENST00000562680 STAB1Q9NY15 2570 aa5.06□□□□□ -1.6
TCF4-216ENST00000562680 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
TCF4-216ENST00000562680 PRR3P79522 188 aaKnown RBP5.05□□□□□ -1.6
TCF4-216ENST00000562680 C10orf25Q5T742 122 aa5.05□□□□□ -1.6
TCF4-216ENST00000562680 LITAFQ99732 161 aa5.05□□□□□ -1.6
TCF4-216ENST00000562680 A0A087WYN8 130 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 APLNQ9ULZ1 77 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 KIAA0087Q14695 138 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 TEX15Q9BXT5 2789 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 FRYLO94915 3013 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 GCN1Q92616 2671 aaKnown RBP5.04□□□□□ -1.6
TCF4-216ENST00000562680 DMXL2Q8TDJ6 3036 aa5.04□□□□□ -1.6
TCF4-216ENST00000562680 WFDC13Q8IUB5 93 aa5.03□□□□□ -1.6
TCF4-216ENST00000562680 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
TCF4-216ENST00000562680 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
TCF4-216ENST00000562680 TLX1NBP0CAT3 122 aa5.03□□□□□ -1.6
TCF4-216ENST00000562680 SETXQ7Z333 2677 aaKnown RBP5.03□□□□□ -1.6
TCF4-216ENST00000562680 LINC00167Q96N53 147 aa5.03□□□□□ -1.6
TCF4-216ENST00000562680 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
TCF4-216ENST00000562680 C1orf64Q8NEQ6 169 aa5.02□□□□□ -1.61
TCF4-216ENST00000562680 A0A1B0GW54 56 aa5.02□□□□□ -1.61
TCF4-216ENST00000562680 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
TCF4-216ENST00000562680 RTL8CO15255 209 aa5.01□□□□□ -1.61
TCF4-216ENST00000562680 C1orf137Q5JT78 98 aa5.01□□□□□ -1.61
TCF4-216ENST00000562680 ELOF1P60002 83 aaKnown RBP5.01□□□□□ -1.61
TCF4-216ENST00000562680 C15orf56Q8N910 161 aa5.01□□□□□ -1.61
TCF4-216ENST00000562680 PLA2G2DQ9UNK4 145 aa5.01□□□□□ -1.61
TCF4-216ENST00000562680 ITPR2Q14571 2701 aa5□□□□□ -1.61
TCF4-216ENST00000562680 PHF5AQ7RTV0 110 aaKnown RBP5□□□□□ -1.61
TCF4-216ENST00000562680 IGLV6-57P01721 117 aa5□□□□□ -1.61
TCF4-216ENST00000562680 FRYQ5TBA9 3013 aa4.99□□□□□ -1.61
TCF4-216ENST00000562680 Q8N9L7 120 aa4.99□□□□□ -1.61
TCF4-216ENST00000562680 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
TCF4-216ENST00000562680 Q6ZRP5 223 aa4.99□□□□□ -1.61
TCF4-216ENST00000562680 Q6ZRX8 168 aa4.99□□□□□ -1.61
TCF4-216ENST00000562680 Q9BRP9 147 aa4.99□□□□□ -1.61
TCF4-216ENST00000562680 DMXL1Q9Y485 3027 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 SPINK6Q6UWN8 80 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 KMT2BQ9UMN6 2715 aaPredicted RBP4.98□□□□□ -1.61
TCF4-216ENST00000562680 ATMQ13315 3056 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 C9orf163Q8N9P6 203 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 APCP25054 2843 aa4.98□□□□□ -1.61
TCF4-216ENST00000562680 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
TCF4-216ENST00000562680 KCNQ1DNQ9H478 68 aa4.97□□□□□ -1.61
TCF4-216ENST00000562680 A0A087WTM6 91 aa4.97□□□□□ -1.61
TCF4-216ENST00000562680 MAP1AP78559 2803 aaPredicted RBP4.97□□□□□ -1.61
TCF4-216ENST00000562680 KRTAP21-3Q3LHN1 58 aa4.96□□□□□ -1.61
TCF4-216ENST00000562680 SPTBN5Q9NRC6 3674 aaKnown RBP4.96□□□□□ -1.61
TCF4-216ENST00000562680 LINC00313P59037 77 aa4.96□□□□□ -1.62
TCF4-216ENST00000562680 PRLHP81277 87 aa4.96□□□□□ -1.62
TCF4-216ENST00000562680 EYSQ5T1H1 3165 aa4.96□□□□□ -1.62
TCF4-216ENST00000562680 VCANP13611 3396 aa4.96□□□□□ -1.62
TCF4-216ENST00000562680 FAM229BQ4G0N7 80 aa4.96□□□□□ -1.62
TCF4-216ENST00000562680 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
TCF4-216ENST00000562680 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
TCF4-216ENST00000562680 FAM218AQ96MZ4 157 aa4.95□□□□□ -1.62
TCF4-216ENST00000562680 COL12A1Q99715 3063 aa4.95□□□□□ -1.62
TCF4-216ENST00000562680 LOC110117498A0A087WWA1 95 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 ITPR1Q14643 2758 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 NOTCH1P46531 2555 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 IGLV1-50A0A075B6I6 118 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 H3BPC8 53 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
TCF4-216ENST00000562680 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
TCF4-216ENST00000562680 EPM2AB3EWF7 344 aa4.93□□□□□ -1.62
TCF4-216ENST00000562680 H0Y9P7 68 aa4.93□□□□□ -1.62
TCF4-216ENST00000562680 KALRNO60229 2985 aa4.93□□□□□ -1.62
TCF4-216ENST00000562680 Q75L30 129 aa4.93□□□□□ -1.62
TCF4-216ENST00000562680 Q6ZQT0 140 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 LINC00476Q8WZB0 136 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 ADGRG4Q8IZF6 3080 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 LINC00528Q8N1L1 170 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 TRBV7-4A0A0J9YYF1 115 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
TCF4-216ENST00000562680 BOD1L1Q8NFC6 3051 aa4.91□□□□□ -1.62
TCF4-216ENST00000562680 CHTF8P0CG12 524 aa4.91□□□□□ -1.62
TCF4-216ENST00000562680 C9orf129Q5T035 196 aaKnown RBP4.91□□□□□ -1.62
TCF4-216ENST00000562680 A0A087WSZ3 146 aa4.9□□□□□ -1.62
TCF4-216ENST00000562680 Q8NBF4 154 aa4.9□□□□□ -1.62
TCF4-216ENST00000562680 IGHV6-1A0A0B4J1U7 121 aa4.9□□□□□ -1.63
TCF4-216ENST00000562680 CIRBP-AS1Q8TBR5 109 aa4.9□□□□□ -1.63
TCF4-216ENST00000562680 FAM229AH3BQW9 127 aa4.9□□□□□ -1.63
TCF4-216ENST00000562680 EIF4EBP3O60516 100 aaPredicted RBP4.89□□□□□ -1.63
TCF4-216ENST00000562680 NBEAQ8NFP9 2946 aa4.89□□□□□ -1.63
TCF4-216ENST00000562680 A0A1B0GU69 56 aa4.88□□□□□ -1.63
TCF4-216ENST00000562680 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
TCF4-216ENST00000562680 FREM2Q5SZK8 3169 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms