RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LELP1Q5T871 98 aa9.34□□□□□ -0.91
RABGGTA-220ENST00000560998 Q6ZRU5 148 aa9.34□□□□□ -0.91
RABGGTA-220ENST00000560998 CHCHD10Q8WYQ3 142 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-220ENST00000560998 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
RABGGTA-220ENST00000560998 Q1T7F1 81 aa9.32□□□□□ -0.92
RABGGTA-220ENST00000560998 IGLV10-54A0A075B6I4 117 aa9.32□□□□□ -0.92
RABGGTA-220ENST00000560998 RETNQ9HD89 108 aa9.32□□□□□ -0.92
RABGGTA-220ENST00000560998 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
RABGGTA-220ENST00000560998 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
RABGGTA-220ENST00000560998 PMAIP1Q13794 54 aa9.31□□□□□ -0.92
RABGGTA-220ENST00000560998 CMYA5Q8N3K9 4069 aa9.3□□□□□ -0.92
RABGGTA-220ENST00000560998 A0A0J9YWU9 116 aa9.29□□□□□ -0.92
RABGGTA-220ENST00000560998 ELOF1P60002 83 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-220ENST00000560998 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-220ENST00000560998 LCE6AA0A183 80 aa9.28□□□□□ -0.92
RABGGTA-220ENST00000560998 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-220ENST00000560998 PRR34Q9NV39 138 aa9.28□□□□□ -0.92
RABGGTA-220ENST00000560998 ZNF73O43830 326 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 KLK12Q9UKR0 248 aa9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 H3BNG1 76 aa9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 FBN1P35555 2871 aaKnown RBP9.26□□□□□ -0.93
RABGGTA-220ENST00000560998 A0A1B0GW54 56 aa9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 SPAG11BQ08648 103 aa9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 KPRPQ5T749 579 aaPredicted RBP9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 STAB1Q9NY15 2570 aa9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 PKD1L1Q8TDX9 2849 aa9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 DNAH3Q8TD57 4116 aa9.24□□□□□ -0.93
RABGGTA-220ENST00000560998 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
RABGGTA-220ENST00000560998 Q8N9L7 120 aa9.23□□□□□ -0.93
RABGGTA-220ENST00000560998 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
RABGGTA-220ENST00000560998 Q6ZRP5 223 aa9.22□□□□□ -0.93
RABGGTA-220ENST00000560998 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.94
RABGGTA-220ENST00000560998 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
RABGGTA-220ENST00000560998 WFDC10BQ8IUB3 73 aa9.21□□□□□ -0.94
RABGGTA-220ENST00000560998 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
RABGGTA-220ENST00000560998 CYP4F30PQ9H0H9 118 aa9.2□□□□□ -0.94
RABGGTA-220ENST00000560998 CYSRT1A8MQ03 144 aa9.19□□□□□ -0.94
RABGGTA-220ENST00000560998 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-220ENST00000560998 TENM3Q9P273 2699 aa9.18□□□□□ -0.94
RABGGTA-220ENST00000560998 ANK2Q01484 3957 aa9.18□□□□□ -0.94
RABGGTA-220ENST00000560998 CD164Q04900 197 aa9.17□□□□□ -0.94
RABGGTA-220ENST00000560998 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
RABGGTA-220ENST00000560998 MAST4O15021 2626 aa9.17□□□□□ -0.94
RABGGTA-220ENST00000560998 SMIM29Q86T20 159 aa9.17□□□□□ -0.94
RABGGTA-220ENST00000560998 DEFB131BA0A096LNP1 70 aa9.15□□□□□ -0.94
RABGGTA-220ENST00000560998 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
RABGGTA-220ENST00000560998 C11orf45Q8TAV5 145 aa9.15□□□□□ -0.94
RABGGTA-220ENST00000560998 M0R378 163 aa9.15□□□□□ -0.95
RABGGTA-220ENST00000560998 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.95
RABGGTA-220ENST00000560998 TRAV22A0A0B4J277 110 aa9.14□□□□□ -0.95
RABGGTA-220ENST00000560998 ETDCA0A1B0GVM5 59 aa9.13□□□□□ -0.95
RABGGTA-220ENST00000560998 NDUFB1O75438 58 aa9.13□□□□□ -0.95
RABGGTA-220ENST00000560998 VPREB1P12018 145 aa9.13□□□□□ -0.95
RABGGTA-220ENST00000560998 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
RABGGTA-220ENST00000560998 IGLV5-48A0A075B6I7 105 aa9.12□□□□□ -0.95
RABGGTA-220ENST00000560998 C3orf84H3BNL1 204 aa9.12□□□□□ -0.95
RABGGTA-220ENST00000560998 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
RABGGTA-220ENST00000560998 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
RABGGTA-220ENST00000560998 PSCAO43653 123 aa9.1□□□□□ -0.95
RABGGTA-220ENST00000560998 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
RABGGTA-220ENST00000560998 PSPHP1O15172 72 aa9.09□□□□□ -0.95
RABGGTA-220ENST00000560998 UBE2BP63146 152 aa9.09□□□□□ -0.95
RABGGTA-220ENST00000560998 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
RABGGTA-220ENST00000560998 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-220ENST00000560998 COL6A5A8TX70 2615 aa9.08□□□□□ -0.96
RABGGTA-220ENST00000560998 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
RABGGTA-220ENST00000560998 LRCOL1A6NCL2 159 aa9.07□□□□□ -0.96
RABGGTA-220ENST00000560998 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
RABGGTA-220ENST00000560998 K7EIL1 84 aa9.05□□□□□ -0.96
RABGGTA-220ENST00000560998 DNAH10OSP0CZ25 163 aa9.05□□□□□ -0.96
RABGGTA-220ENST00000560998 UBE2AP49459 152 aa9.05□□□□□ -0.96
RABGGTA-220ENST00000560998 SYCNQ0VAF6 134 aa9.05□□□□□ -0.96
RABGGTA-220ENST00000560998 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
RABGGTA-220ENST00000560998 NBEAL1Q6ZS30 2694 aa9.03□□□□□ -0.96
RABGGTA-220ENST00000560998 Q8N377 158 aa9.03□□□□□ -0.96
RABGGTA-220ENST00000560998 Q8NBF4 154 aa9.03□□□□□ -0.96
RABGGTA-220ENST00000560998 A8MUN3 132 aa9.02□□□□□ -0.97
RABGGTA-220ENST00000560998 Q5VV11 94 aa9.02□□□□□ -0.97
RABGGTA-220ENST00000560998 MRPL55Q7Z7F7 128 aaKnown RBP9.02□□□□□ -0.97
RABGGTA-220ENST00000560998 SPRR4Q96PI1 79 aa9.02□□□□□ -0.97
RABGGTA-220ENST00000560998 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
RABGGTA-220ENST00000560998 A0A1W2PNM2 257 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 KTN1-AS1Q86SY8 53 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 LINC00588Q9Y4M8 146 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 HCG22E2RYF7 251 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 DSCR10P59022 87 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 DHRS4-AS1Q9P1J3 65 aa9.01□□□□□ -0.97
RABGGTA-220ENST00000560998 HUWE1Q7Z6Z7 4374 aaKnown RBP9□□□□□ -0.97
RABGGTA-220ENST00000560998 TNP2Q05952 138 aa9□□□□□ -0.97
RABGGTA-220ENST00000560998 SPANXA2-OT1Q8N9U9 137 aa9□□□□□ -0.97
RABGGTA-220ENST00000560998 MP68P56378 58 aa8.99□□□□□ -0.97
RABGGTA-220ENST00000560998 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
RABGGTA-220ENST00000560998 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
RABGGTA-220ENST00000560998 Q9BRP9 147 aa8.98□□□□□ -0.97
RABGGTA-220ENST00000560998 H3BPC8 53 aa8.97□□□□□ -0.97
RABGGTA-220ENST00000560998 K7EQZ3 153 aa8.97□□□□□ -0.97
RABGGTA-220ENST00000560998 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms