RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 H0YGX0 51 aa7.78□□□□□ -1.16
TPM1-209ENST00000558072 PSMB2P49721 201 aa7.78□□□□□ -1.16
TPM1-209ENST00000558072 REG3GQ6UW15 175 aa7.78□□□□□ -1.16
TPM1-209ENST00000558072 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.17
TPM1-209ENST00000558072 ETDCA0A1B0GVM5 59 aa7.77□□□□□ -1.17
TPM1-209ENST00000558072 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
TPM1-209ENST00000558072 H7C2G1 150 aa7.77□□□□□ -1.17
TPM1-209ENST00000558072 ZNF73O43830 326 aaPredicted RBP7.77□□□□□ -1.17
TPM1-209ENST00000558072 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
TPM1-209ENST00000558072 SMIM11BQ8TCY0 68 aa7.77□□□□□ -1.17
TPM1-209ENST00000558072 K7ERJ3 54 aa7.76□□□□□ -1.17
TPM1-209ENST00000558072 C9orf118A6NHY6 69 aa7.75□□□□□ -1.17
TPM1-209ENST00000558072 TSPAN13O95857 204 aa7.75□□□□□ -1.17
TPM1-209ENST00000558072 SCGB1C2P0DMR2 95 aa7.75□□□□□ -1.17
TPM1-209ENST00000558072 SPRR1AP35321 89 aa7.75□□□□□ -1.17
TPM1-209ENST00000558072 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
TPM1-209ENST00000558072 SLC25A20O43772 301 aa7.74□□□□□ -1.17
TPM1-209ENST00000558072 BCE1O60756 84 aa7.74□□□□□ -1.17
TPM1-209ENST00000558072 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
TPM1-209ENST00000558072 XGP55808 180 aa7.74□□□□□ -1.17
TPM1-209ENST00000558072 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
TPM1-209ENST00000558072 A0A1B0GX51 115 aa7.73□□□□□ -1.17
TPM1-209ENST00000558072 H0Y9J4 135 aa7.73□□□□□ -1.17
TPM1-209ENST00000558072 GHRHP01286 108 aa7.73□□□□□ -1.17
TPM1-209ENST00000558072 COX7BP24311 80 aa7.73□□□□□ -1.17
TPM1-209ENST00000558072 TAX1BP3O14907 124 aa7.72□□□□□ -1.17
TPM1-209ENST00000558072 DHRS4-AS1Q9P1J3 65 aa7.72□□□□□ -1.17
TPM1-209ENST00000558072 RYR1P21817 5038 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 TRBV20-1A0A075B6N2 111 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 FABP2P12104 132 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 UBE2AP49459 152 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
TPM1-209ENST00000558072 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
TPM1-209ENST00000558072 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 H3BUT2 72 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 TRIAP1O43715 76 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 SMR3BP02814 79 aaPredicted RBP7.7□□□□□ -1.18
TPM1-209ENST00000558072 C1orf137Q5JT78 98 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 Q6ZRX8 168 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
TPM1-209ENST00000558072 B5MCH6 92 aa7.69□□□□□ -1.18
TPM1-209ENST00000558072 H3BQ85 93 aa7.69□□□□□ -1.18
TPM1-209ENST00000558072 A0A1W2PPM0 123 aa7.68□□□□□ -1.18
TPM1-209ENST00000558072 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
TPM1-209ENST00000558072 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
TPM1-209ENST00000558072 RPL37AP61513 92 aaKnown RBP7.68□□□□□ -1.18
TPM1-209ENST00000558072 DNAL4O96015 105 aa7.67□□□□□ -1.18
TPM1-209ENST00000558072 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
TPM1-209ENST00000558072 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
TPM1-209ENST00000558072 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
TPM1-209ENST00000558072 HSPG2P98160 4391 aa7.67□□□□□ -1.18
TPM1-209ENST00000558072 hADV29S1A0JD25 119 aa7.66□□□□□ -1.18
TPM1-209ENST00000558072 ZNF861PO60384 105 aa7.66□□□□□ -1.18
TPM1-209ENST00000558072 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
TPM1-209ENST00000558072 OCIAD2Q56VL3 154 aa7.66□□□□□ -1.18
TPM1-209ENST00000558072 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
TPM1-209ENST00000558072 GTF2H5Q6ZYL4 71 aa7.65□□□□□ -1.18
TPM1-209ENST00000558072 ZNF706Q9Y5V0 76 aaPredicted RBP7.65□□□□□ -1.18
TPM1-209ENST00000558072 TRACP01848 142 aa7.64□□□□□ -1.19
TPM1-209ENST00000558072 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.63□□□□□ -1.19
TPM1-209ENST00000558072 LST1O00453 97 aa7.62□□□□□ -1.19
TPM1-209ENST00000558072 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
TPM1-209ENST00000558072 PPDPFLQ8WWR9 84 aa7.62□□□□□ -1.19
TPM1-209ENST00000558072 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
TPM1-209ENST00000558072 HIGD2AQ9BW72 106 aa7.62□□□□□ -1.19
TPM1-209ENST00000558072 SPCS1Q9Y6A9 102 aa7.62□□□□□ -1.19
TPM1-209ENST00000558072 PRLHP81277 87 aa7.61□□□□□ -1.19
TPM1-209ENST00000558072 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
TPM1-209ENST00000558072 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
TPM1-209ENST00000558072 CLEC2BQ92478 149 aa7.6□□□□□ -1.19
TPM1-209ENST00000558072 HERC2O95714 4834 aa7.59□□□□□ -1.19
TPM1-209ENST00000558072 TCL1BO95988 128 aa7.59□□□□□ -1.19
TPM1-209ENST00000558072 Q9BRP9 147 aa7.59□□□□□ -1.19
TPM1-209ENST00000558072 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
TPM1-209ENST00000558072 ORMDL1Q9P0S3 153 aa7.59□□□□□ -1.19
TPM1-209ENST00000558072 K7EP34 96 aa7.58□□□□□ -1.2
TPM1-209ENST00000558072 TMEM256-PLSCR3K7ERE1 68 aa7.58□□□□□ -1.2
TPM1-209ENST00000558072 FAT1Q14517 4588 aa7.57□□□□□ -1.2
TPM1-209ENST00000558072 Q6ZQY7 126 aa7.57□□□□□ -1.2
TPM1-209ENST00000558072 Q8N1X5 172 aa7.57□□□□□ -1.2
TPM1-209ENST00000558072 FAM218AQ96MZ4 157 aa7.57□□□□□ -1.2
TPM1-209ENST00000558072 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
TPM1-209ENST00000558072 Q5VSD8 79 aa7.56□□□□□ -1.2
TPM1-209ENST00000558072 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
TPM1-209ENST00000558072 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
TPM1-209ENST00000558072 H3BMG7 143 aa7.54□□□□□ -1.2
TPM1-209ENST00000558072 H3BT86 120 aa7.54□□□□□ -1.2
TPM1-209ENST00000558072 C9JAW5 83 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 F8W1H4 67 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 BAALC-AS2P0C853 105 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 SPRR1BP22528 89 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 SPRR4Q96PI1 79 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 LAMTOR3Q9UHA4 124 aa7.52□□□□□ -1.21
TPM1-209ENST00000558072 F8WEM9 126 aa7.51□□□□□ -1.21
TPM1-209ENST00000558072 FAM229BQ4G0N7 80 aa7.51□□□□□ -1.21
TPM1-209ENST00000558072 DEFB105AQ8NG35 78 aa7.51□□□□□ -1.21
TPM1-209ENST00000558072 VPS13BQ7Z7G8 4022 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms