RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ATP5L2Q7Z4Y8 100 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 TMEM243Q9BU79 118 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 RNASE7Q9H1E1 156 aaKnown RBP3.6□□□□□ -1.83
VPS33B-207ENST00000557470 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 PKIGQ9Y2B9 76 aa3.6□□□□□ -1.83
VPS33B-207ENST00000557470 TRBV20OR9-2A0A075B6H5 130 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 TRAV13-1A0A0B4J241 112 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 J3QQQ9 107 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 M0QY20 66 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 ATOX1O00244 68 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 C6orf99Q4VX62 202 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 SPANXN1Q5VSR9 72 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 Q5XG85 94 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 C2orf66Q6UXQ4 117 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 AMN1Q8IY45 258 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 CEND1Q8N111 149 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 FAM19A2Q8N3H0 131 aa3.59□□□□□ -1.83
VPS33B-207ENST00000557470 GVQW2A0A096LPI5 108 aaPredicted RBP3.58□□□□□ -1.84
VPS33B-207ENST00000557470 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 FAM236DA0A1B0GTK5 79 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 F2Z2F3 143 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 MGPP08493 103 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 FAM236CP0DP71 79 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 CXCL5P42830 114 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 FOXA3P55318 350 aaPredicted RBP3.58□□□□□ -1.84
VPS33B-207ENST00000557470 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
VPS33B-207ENST00000557470 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 DHRS4-AS1Q9P1J3 65 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 LINC00474Q9P2X8 69 aa3.58□□□□□ -1.84
VPS33B-207ENST00000557470 LOC389332A0A1B0GUA5 103 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 FAM236AA0A1B0GUQ0 79 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 FAM236BA0A1B0GV22 79 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 SMIM27A0A1W2PRY6 76 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 UBE2L6O14933 153 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 HERVK_113P61574 105 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 CENPWQ5EE01 88 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 Q8NBF4 154 aa3.57□□□□□ -1.84
VPS33B-207ENST00000557470 NHP2Q9NX24 153 aaKnown RBP3.57□□□□□ -1.84
VPS33B-207ENST00000557470 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 IGKCP01834 107 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 RBM12B-AS1Q9P1G2 102 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 V9GYV3 84 aa3.56□□□□□ -1.84
VPS33B-207ENST00000557470 IGLV8-61A0A075B6I0 122 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 TRAV26-2A0A0B4J265 109 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 C19orf71A6NCJ1 209 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 NPYP01303 97 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 NPC2P61916 151 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 PSORS1C2Q9UIG4 136 aa3.55□□□□□ -1.84
VPS33B-207ENST00000557470 MYMXA0A1B0GTQ4 84 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 A0A1W2PNN7 141 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 XCL1P47992 114 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 FXYD2P54710 66 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 CXCL6P80162 114 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 ORMDL2Q53FV1 153 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
VPS33B-207ENST00000557470 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
VPS33B-207ENST00000557470 IGHV1-58A0A0C4DH39 117 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
VPS33B-207ENST00000557470 ATP5EP56381 51 aaPredicted RBP3.53□□□□□ -1.84
VPS33B-207ENST00000557470 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 C1orf137Q5JT78 98 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 SMIM29Q86T20 159 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 LINC00643Q86TS7 51 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 IFI27L1Q96BM0 104 aa3.53□□□□□ -1.84
VPS33B-207ENST00000557470 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
VPS33B-207ENST00000557470 H3BT86 120 aa3.52□□□□□ -1.85
VPS33B-207ENST00000557470 MP68P56378 58 aa3.52□□□□□ -1.85
VPS33B-207ENST00000557470 HBBP68871 147 aa3.52□□□□□ -1.85
VPS33B-207ENST00000557470 C9orf116Q5BN46 136 aaPredicted RBP3.52□□□□□ -1.85
VPS33B-207ENST00000557470 PHF5AQ7RTV0 110 aaKnown RBP3.52□□□□□ -1.85
VPS33B-207ENST00000557470 DIRC1Q969H9 104 aa3.52□□□□□ -1.85
VPS33B-207ENST00000557470 NXT2Q9NPJ8 142 aaKnown RBP3.52□□□□□ -1.85
VPS33B-207ENST00000557470 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 H7C423 109 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 SLC25A20O43772 301 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 IGLV7-43P04211 117 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 LYZL1Q6UWQ5 148 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 PRR15Q8IV56 129 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 RPL39LQ96EH5 51 aaKnown RBP3.51□□□□□ -1.85
VPS33B-207ENST00000557470 TIMM17AQ99595 171 aa3.51□□□□□ -1.85
VPS33B-207ENST00000557470 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 A0A087X002 238 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 KRTAP4-16G5E9R7 235 aaPredicted RBP3.5□□□□□ -1.85
VPS33B-207ENST00000557470 K7ERJ3 54 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 ATXN8Q156A1 80 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
VPS33B-207ENST00000557470 RPP21Q9H633 154 aaKnown RBP3.5□□□□□ -1.85
VPS33B-207ENST00000557470 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 hADV29S1A0JD25 119 aa3.49□□□□□ -1.85
VPS33B-207ENST00000557470 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms