RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 COX7A2LO14548 114 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 APOMO95445 188 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 ANGP03950 147 aaKnown RBP1.72□□□□□ -2.13
VRK1-207ENST00000557352 HTN3P15516 51 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 TSPEAR-AS2P59090 65 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 CTAG1AP78358 180 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 COX6A2Q02221 97 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 CIRBPQ14011 172 aaKnown RBP1.72□□□□□ -2.13
VRK1-207ENST00000557352 COL5A1-AS1Q5SY13 56 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 BVES-AS1Q5T3Y7 98 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 KRTAP26-1Q6PEX3 210 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 ENHOQ6UWT2 76 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 LINC00269Q8N2A0 174 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 ORAOV1Q8WV07 137 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 SNHG12Q9BXW3 62 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 C8orf17Q9NRJ1 99 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 NDUFA12Q9UI09 145 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 APLNQ9ULZ1 77 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 DNHD1Q96M86 4753 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 LYSTQ99698 3801 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 SMIM26A0A096LP01 95 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 A0A0B4J2C4 111 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 TRBV30A0A0K0K1B3 111 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 TMEM262E9PQX1 116 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 CRPP02741 224 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 SPINK8P0C7L1 97 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 RNASE13Q5GAN3 156 aaKnown RBP1.71□□□□□ -2.14
VRK1-207ENST00000557352 TTC32Q5I0X7 151 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 SCGB1D4Q6XE38 83 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 WFDC10BQ8IUB3 73 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 COX7B2Q8TF08 81 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 DEFB104AQ8WTQ1 72 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
VRK1-207ENST00000557352 TTTY13Q9BZ97 58 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 LINC00588Q9Y4M8 146 aa1.71□□□□□ -2.14
VRK1-207ENST00000557352 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.7□□□□□ -2.14
VRK1-207ENST00000557352 IGLL5B9A064 214 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 NDUFC2O95298 119 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 PFN2P35080 140 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 XCL1P47992 114 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 FXYD2P54710 66 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 MEIG1Q5JSS6 88 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 MIR7-3HGQ8N6C7 128 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 UBE2WQ96B02 151 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 PKIGQ9Y2B9 76 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 STARD9Q9P2P6 4700 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 DNAH1Q9P2D7 4330 aa1.7□□□□□ -2.14
VRK1-207ENST00000557352 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 TRBV10-2A0A0K0K1G8 114 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 A8MUU9 505 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 C3orf84H3BNL1 204 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 TAX1BP3O14907 124 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 IGHV3-33P01772 117 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 SMIM13P0DJ93 91 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
VRK1-207ENST00000557352 CKS1BP61024 79 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 CNBPP62633 177 aaKnown RBP1.69□□□□□ -2.14
VRK1-207ENST00000557352 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 LYRM7Q5U5X0 104 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 C5orf38Q86SI9 138 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 ST20-AS1Q8NBB2 130 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 LINC00308Q8TCZ7 52 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 ERG28Q9UKR5 140 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 FRAS1Q86XX4 4008 aa1.69□□□□□ -2.14
VRK1-207ENST00000557352 HECTD4Q9Y4D8 3996 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 ALMS1Q8TCU4 4167 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 IGLV10-54A0A075B6I4 117 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 TRBV20-1A0A075B6N2 111 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 IGKV3OR2-268A0A0C4DH90 116 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 NBDYA0A0U1RRE5 68 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 M0QXV9 152 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 SPINT4Q6UDR6 99 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 CLPSL2Q6UWE3 100 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
VRK1-207ENST00000557352 MUSTN1Q8IVN3 82 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 LINC01600Q96MT4 127 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 NHP2Q9NX24 153 aaKnown RBP1.68□□□□□ -2.14
VRK1-207ENST00000557352 TOMM7Q9P0U1 55 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 PRO1854Q9UHT4 67 aa1.68□□□□□ -2.14
VRK1-207ENST00000557352 PLECQ15149 4684 aaKnown RBP1.68□□□□□ -2.14
VRK1-207ENST00000557352 A0A1B0GX51 115 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 A0A1W2PPM0 123 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 FABP2P12104 132 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 RPL28P46779 137 aaKnown RBP1.67□□□□□ -2.14
VRK1-207ENST00000557352 LINC00158P58513 81 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 BATFQ16520 125 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 C2orf82Q6UX34 121 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 SOSTDC1Q6X4U4 206 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 GTF2H5Q6ZYL4 71 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 UBE2DNLQ8IWF7 75 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 SPANXA2-OT1Q8N9U9 137 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 CARD19Q96LW7 228 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 C6orf48Q9UBA6 75 aa1.67□□□□□ -2.14
VRK1-207ENST00000557352 TRBV7-6A0A0J9YX20 115 aa1.66□□□□□ -2.14
VRK1-207ENST00000557352 LOC107984640A0A0U1RRK4 108 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms