RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
SEC23A-213ENST00000557280 COPS9Q8WXC6 57 aa12.57□□□□□ -0.4
SEC23A-213ENST00000557280 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
SEC23A-213ENST00000557280 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
SEC23A-213ENST00000557280 TNXBP22105 4242 aa12.56□□□□□ -0.4
SEC23A-213ENST00000557280 ETDCA0A1B0GVM5 59 aa12.54□□□□□ -0.4
SEC23A-213ENST00000557280 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
SEC23A-213ENST00000557280 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
SEC23A-213ENST00000557280 B5MCH6 92 aa12.52□□□□□ -0.41
SEC23A-213ENST00000557280 ZNF73O43830 326 aaPredicted RBP12.52□□□□□ -0.41
SEC23A-213ENST00000557280 S100A12P80511 92 aa12.52□□□□□ -0.41
SEC23A-213ENST00000557280 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
SEC23A-213ENST00000557280 HIGD2AQ9BW72 106 aa12.52□□□□□ -0.41
SEC23A-213ENST00000557280 A4D1N5 150 aa12.51□□□□□ -0.41
SEC23A-213ENST00000557280 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
SEC23A-213ENST00000557280 HIGD1BQ9P298 99 aa12.5□□□□□ -0.41
SEC23A-213ENST00000557280 HERC1Q15751 4861 aa12.5□□□□□ -0.41
SEC23A-213ENST00000557280 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
SEC23A-213ENST00000557280 ANAPC11Q9NYG5 84 aa12.49□□□□□ -0.41
SEC23A-213ENST00000557280 KRTAP10-8P60410 259 aa12.48□□□□□ -0.41
SEC23A-213ENST00000557280 C12orf57Q99622 126 aa12.48□□□□□ -0.41
SEC23A-213ENST00000557280 Q9BRP9 147 aa12.48□□□□□ -0.41
SEC23A-213ENST00000557280 A6NDN8 102 aa12.47□□□□□ -0.41
SEC23A-213ENST00000557280 Q6ZRX8 168 aa12.47□□□□□ -0.41
SEC23A-213ENST00000557280 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
SEC23A-213ENST00000557280 A0A087X002 238 aa12.44□□□□□ -0.42
SEC23A-213ENST00000557280 TRAV13-2A0A0B4J235 113 aa12.44□□□□□ -0.42
SEC23A-213ENST00000557280 LOC105371267A0A1B0GV96 52 aa12.44□□□□□ -0.42
SEC23A-213ENST00000557280 C6orf99Q4VX62 202 aa12.44□□□□□ -0.42
SEC23A-213ENST00000557280 CBY1Q9Y3M2 126 aa12.43□□□□□ -0.42
SEC23A-213ENST00000557280 SPRR4Q96PI1 79 aa12.41□□□□□ -0.42
SEC23A-213ENST00000557280 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
SEC23A-213ENST00000557280 SMIM11BQ8TCY0 68 aa12.4□□□□□ -0.42
SEC23A-213ENST00000557280 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
SEC23A-213ENST00000557280 COX7BP24311 80 aa12.38□□□□□ -0.43
SEC23A-213ENST00000557280 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
SEC23A-213ENST00000557280 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
SEC23A-213ENST00000557280 TAL2Q16559 108 aa12.38□□□□□ -0.43
SEC23A-213ENST00000557280 CEND1Q8N111 149 aa12.38□□□□□ -0.43
SEC23A-213ENST00000557280 CFC1BP0CG36 223 aa12.37□□□□□ -0.43
SEC23A-213ENST00000557280 CFC1P0CG37 223 aa12.37□□□□□ -0.43
SEC23A-213ENST00000557280 HINT1P49773 126 aaPredicted RBP12.37□□□□□ -0.43
SEC23A-213ENST00000557280 KRTAP13-2Q52LG2 175 aa12.37□□□□□ -0.43
SEC23A-213ENST00000557280 PRO1933Q9H354 126 aa12.37□□□□□ -0.43
SEC23A-213ENST00000557280 FXYD2P54710 66 aa12.36□□□□□ -0.43
SEC23A-213ENST00000557280 CRYGAP11844 174 aa12.35□□□□□ -0.43
SEC23A-213ENST00000557280 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
SEC23A-213ENST00000557280 ST20-AS1Q8NBB2 130 aa12.34□□□□□ -0.43
SEC23A-213ENST00000557280 ZNF706Q9Y5V0 76 aaPredicted RBP12.34□□□□□ -0.43
SEC23A-213ENST00000557280 HSD52Q0P140 79 aa12.33□□□□□ -0.44
SEC23A-213ENST00000557280 TRBV7-6A0A0J9YX20 115 aa12.32□□□□□ -0.44
SEC23A-213ENST00000557280 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
SEC23A-213ENST00000557280 A0A0B4J2C4 111 aa12.31□□□□□ -0.44
SEC23A-213ENST00000557280 C3orf22Q8N5N4 141 aa12.31□□□□□ -0.44
SEC23A-213ENST00000557280 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
SEC23A-213ENST00000557280 H7C2G1 150 aa12.3□□□□□ -0.44
SEC23A-213ENST00000557280 LINC00483Q53H64 154 aa12.3□□□□□ -0.44
SEC23A-213ENST00000557280 RAB37Q96AX2 223 aa12.3□□□□□ -0.44
SEC23A-213ENST00000557280 DHRS4-AS1Q9P1J3 65 aa12.3□□□□□ -0.44
SEC23A-213ENST00000557280 TYMSOSQ8TAI1 123 aa12.28□□□□□ -0.44
SEC23A-213ENST00000557280 TMEM238LA0A1B0GVL6 79 aa12.26□□□□□ -0.45
SEC23A-213ENST00000557280 A6NJY4 79 aa12.26□□□□□ -0.45
SEC23A-213ENST00000557280 K7ERJ3 54 aa12.25□□□□□ -0.45
SEC23A-213ENST00000557280 NHP2Q9NX24 153 aaKnown RBP12.24□□□□□ -0.45
SEC23A-213ENST00000557280 PRO1854Q9UHT4 67 aa12.22□□□□□ -0.45
SEC23A-213ENST00000557280 LINC00575Q6W349 94 aa12.21□□□□□ -0.45
SEC23A-213ENST00000557280 HMCN2Q8NDA2 5059 aa12.2□□□□□ -0.46
SEC23A-213ENST00000557280 VAMP3Q15836 100 aa12.2□□□□□ -0.46
SEC23A-213ENST00000557280 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
SEC23A-213ENST00000557280 IGLV9-49A0A0B4J1Y8 123 aa12.19□□□□□ -0.46
SEC23A-213ENST00000557280 SPRR1BP22528 89 aa12.19□□□□□ -0.46
SEC23A-213ENST00000557280 LINC01547P58512 204 aaPredicted RBP12.18□□□□□ -0.46
SEC23A-213ENST00000557280 CTAG1AP78358 180 aa12.18□□□□□ -0.46
SEC23A-213ENST00000557280 Q1RN00 199 aa12.18□□□□□ -0.46
SEC23A-213ENST00000557280 DEFB105AQ8NG35 78 aa12.18□□□□□ -0.46
SEC23A-213ENST00000557280 MOBPQ13875 183 aa12.17□□□□□ -0.46
SEC23A-213ENST00000557280 LINC00304Q8N9R0 145 aa12.16□□□□□ -0.46
SEC23A-213ENST00000557280 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
SEC23A-213ENST00000557280 TSPAN13O95857 204 aa12.14□□□□□ -0.47
SEC23A-213ENST00000557280 Q8NBF4 154 aa12.14□□□□□ -0.47
SEC23A-213ENST00000557280 FAM218AQ96MZ4 157 aa12.14□□□□□ -0.47
SEC23A-213ENST00000557280 hADV29S1A0JD25 119 aa12.13□□□□□ -0.47
SEC23A-213ENST00000557280 TSTD3H0UI37 97 aa12.13□□□□□ -0.47
SEC23A-213ENST00000557280 TRIAP1O43715 76 aa12.13□□□□□ -0.47
SEC23A-213ENST00000557280 SLC25A20O43772 301 aa12.13□□□□□ -0.47
SEC23A-213ENST00000557280 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
SEC23A-213ENST00000557280 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
SEC23A-213ENST00000557280 Q6ZQY7 126 aa12.11□□□□□ -0.47
SEC23A-213ENST00000557280 SMIM29Q86T20 159 aa12.1□□□□□ -0.47
SEC23A-213ENST00000557280 Q8N377 158 aa12.1□□□□□ -0.47
SEC23A-213ENST00000557280 H0YGX0 51 aa12.07□□□□□ -0.48
SEC23A-213ENST00000557280 M0R143 59 aa12.07□□□□□ -0.48
SEC23A-213ENST00000557280 LAMTOR3Q9UHA4 124 aa12.07□□□□□ -0.48
SEC23A-213ENST00000557280 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
SEC23A-213ENST00000557280 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
SEC23A-213ENST00000557280 PSMB2P49721 201 aa12.04□□□□□ -0.48
SEC23A-213ENST00000557280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
SEC23A-213ENST00000557280 SPAG11AQ6PDA7 123 aa12□□□□□ -0.49
SEC23A-213ENST00000557280 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
SEC23A-213ENST00000557280 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms