RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 SYCNQ0VAF6 134 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 ETDBQ3ZM63 59 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 C9orf116Q5BN46 136 aaPredicted RBP2.93□□□□□ -1.94
SRP54-212ENST00000556992 ANKRD29Q8N6D5 301 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 LINC00337Q8N6G1 96 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 CARD19Q96LW7 228 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 CBY1Q9Y3M2 126 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 HERC1Q15751 4861 aa2.93□□□□□ -1.94
SRP54-212ENST00000556992 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
SRP54-212ENST00000556992 TENM2Q9NT68 2774 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 NUPR2A6NF83 97 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 NDUFC2-KCTD14E9PQ53 114 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 H3BT86 120 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 PRR3P79522 188 aaKnown RBP2.92□□□□□ -1.94
SRP54-212ENST00000556992 HIGD2BQ4VC39 106 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 S100A7L2Q5SY68 101 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 TEN1Q86WV5 123 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 SMIM11BQ8TCY0 68 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 PPDPFLQ8WWR9 84 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 LINC00526Q96FQ7 95 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 Q9HAA7 133 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 C6orf48Q9UBA6 75 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 APLNQ9ULZ1 77 aa2.92□□□□□ -1.94
SRP54-212ENST00000556992 A0A1B0GX51 115 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 BAALC-AS2P0C853 105 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 Q6ZRU5 148 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 UBE2DNLQ8IWF7 75 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 C15orf56Q8N910 161 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 CLEC2BQ92478 149 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 VPS25Q9BRG1 176 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 STAB2Q8WWQ8 2551 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 CSMD3Q7Z407 3707 aa2.91□□□□□ -1.94
SRP54-212ENST00000556992 KIAA1109Q2LD37 5005 aa2.9□□□□□ -1.94
SRP54-212ENST00000556992 NACAE9PAV3 2078 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 TRBV7-6A0A0J9YX20 115 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 USP17L23D6RBM5 183 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 H3BQ85 93 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 M0R378 163 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 DNAL4O96015 105 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 IGLV6-57P01721 117 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 TLX1NBP0CAT3 122 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 TTC32Q5I0X7 151 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 MTURNQ8N3F0 131 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 HECTD4Q9Y4D8 3996 aa2.9□□□□□ -1.95
SRP54-212ENST00000556992 PSCAO43653 123 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 GAGE2EQ4V326 116 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 XAGE1AQ9HD64 81 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 GAGE2DQ9UEU5 116 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
SRP54-212ENST00000556992 NBDYA0A0U1RRE5 68 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 LOC107984640A0A0U1RRK4 108 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 NCR3O14931 201 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 LECT2O14960 151 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 VPREB1P12018 145 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
SRP54-212ENST00000556992 Q6ZRP5 223 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 Q8N814 137 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 SIGMAR1Q99720 223 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 PKIGQ9Y2B9 76 aa2.88□□□□□ -1.95
SRP54-212ENST00000556992 HUWE1Q7Z6Z7 4374 aaKnown RBP2.88□□□□□ -1.95
SRP54-212ENST00000556992 TRAV23DV6A0A075B6W5 121 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 TRBV10-3A0A0K0K1G6 114 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 TEX49A0A1B0GTD5 131 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 hADV29S1A0JD25 119 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 TMEM256-PLSCR3K7ERE1 68 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 ZNF73O43830 326 aaPredicted RBP2.87□□□□□ -1.95
SRP54-212ENST00000556992 ACYP1P07311 99 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 INAFM2P0DMQ5 153 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
SRP54-212ENST00000556992 C6orf99Q4VX62 202 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 CASC10Q5T4H9 136 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 LINC00575Q6W349 94 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 NKAPP1Q8N9T2 125 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 Q8NDZ9 215 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 ORMDL1Q9P0S3 153 aa2.87□□□□□ -1.95
SRP54-212ENST00000556992 JMJD7-PLA2G4BH0Y9G9 81 aa2.86□□□□□ -1.95
SRP54-212ENST00000556992 COX7BP24311 80 aa2.86□□□□□ -1.95
SRP54-212ENST00000556992 C9orf129Q5T035 196 aaKnown RBP2.86□□□□□ -1.95
SRP54-212ENST00000556992 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
SRP54-212ENST00000556992 KCNQ1DNQ9H478 68 aa2.86□□□□□ -1.95
SRP54-212ENST00000556992 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 PCP4P48539 62 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 GAGE2BQ13066 116 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.85□□□□□ -1.95
SRP54-212ENST00000556992 C7orf33Q8WU49 177 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 LINC00474Q9P2X8 69 aa2.85□□□□□ -1.95
SRP54-212ENST00000556992 IGLV1-50A0A075B6I6 118 aa2.84□□□□□ -1.95
SRP54-212ENST00000556992 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
SRP54-212ENST00000556992 PDE6GP18545 87 aa2.84□□□□□ -1.95
SRP54-212ENST00000556992 ELOF1P60002 83 aaKnown RBP2.84□□□□□ -1.95
SRP54-212ENST00000556992 SERTAD4-AS1Q5TG53 156 aa2.84□□□□□ -1.95
SRP54-212ENST00000556992 DHRS4-AS1Q9P1J3 65 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms