RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 S100A12P80511 92 aa8.08□□□□□ -1.12
SHMT2-219ENST00000555563 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
SHMT2-219ENST00000555563 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
SHMT2-219ENST00000555563 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
SHMT2-219ENST00000555563 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
SHMT2-219ENST00000555563 S100A6P06703 90 aa8.06□□□□□ -1.12
SHMT2-219ENST00000555563 AKR1D1P51857 326 aa8.06□□□□□ -1.12
SHMT2-219ENST00000555563 SPRR4Q96PI1 79 aa8.06□□□□□ -1.12
SHMT2-219ENST00000555563 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 B5MCH6 92 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 GHRHP01286 108 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 SCGB1D4Q6XE38 83 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 SMCR5Q8TEV8 140 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
SHMT2-219ENST00000555563 PCP2Q8IVA1 136 aa8.04□□□□□ -1.12
SHMT2-219ENST00000555563 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-219ENST00000555563 Q6ZRX8 168 aa8.03□□□□□ -1.12
SHMT2-219ENST00000555563 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
SHMT2-219ENST00000555563 TSPAN13O95857 204 aa8.02□□□□□ -1.13
SHMT2-219ENST00000555563 C3orf22Q8N5N4 141 aa8.02□□□□□ -1.13
SHMT2-219ENST00000555563 ZNF73O43830 326 aaPredicted RBP8.01□□□□□ -1.13
SHMT2-219ENST00000555563 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
SHMT2-219ENST00000555563 SNRPEP62304 92 aaKnown RBP8.01□□□□□ -1.13
SHMT2-219ENST00000555563 Q9BRP9 147 aa8.01□□□□□ -1.13
SHMT2-219ENST00000555563 LINC00304Q8N9R0 145 aa8□□□□□ -1.13
SHMT2-219ENST00000555563 OR13C6PQ8NH95 151 aa7.99□□□□□ -1.13
SHMT2-219ENST00000555563 PPDPFQ9H3Y8 114 aa7.99□□□□□ -1.13
SHMT2-219ENST00000555563 C5orf52A6NGY3 159 aa7.98□□□□□ -1.13
SHMT2-219ENST00000555563 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
SHMT2-219ENST00000555563 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
SHMT2-219ENST00000555563 HSBP1L1C9JCN9 74 aa7.97□□□□□ -1.13
SHMT2-219ENST00000555563 IFITM1P13164 125 aa7.97□□□□□ -1.13
SHMT2-219ENST00000555563 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
SHMT2-219ENST00000555563 PRR4Q16378 134 aa7.97□□□□□ -1.13
SHMT2-219ENST00000555563 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
SHMT2-219ENST00000555563 Q6ZVH6 145 aa7.96□□□□□ -1.14
SHMT2-219ENST00000555563 LINC00518Q8N0U6 118 aa7.96□□□□□ -1.14
SHMT2-219ENST00000555563 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
SHMT2-219ENST00000555563 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
SHMT2-219ENST00000555563 SCGB1D1O95968 90 aa7.94□□□□□ -1.14
SHMT2-219ENST00000555563 HINT1P49773 126 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-219ENST00000555563 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
SHMT2-219ENST00000555563 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
SHMT2-219ENST00000555563 Q8NBF4 154 aa7.92□□□□□ -1.14
SHMT2-219ENST00000555563 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
SHMT2-219ENST00000555563 MOBPQ13875 183 aa7.91□□□□□ -1.14
SHMT2-219ENST00000555563 RETNLBQ9BQ08 111 aa7.91□□□□□ -1.14
SHMT2-219ENST00000555563 IGLV9-49A0A0B4J1Y8 123 aa7.9□□□□□ -1.14
SHMT2-219ENST00000555563 A6NDN8 102 aa7.9□□□□□ -1.14
SHMT2-219ENST00000555563 COX7BP24311 80 aa7.9□□□□□ -1.14
SHMT2-219ENST00000555563 CTAG1AP78358 180 aa7.89□□□□□ -1.15
SHMT2-219ENST00000555563 SPAG11AQ6PDA7 123 aa7.89□□□□□ -1.15
SHMT2-219ENST00000555563 DHRS4-AS1Q9P1J3 65 aa7.89□□□□□ -1.15
SHMT2-219ENST00000555563 COX8AP10176 69 aa7.87□□□□□ -1.15
SHMT2-219ENST00000555563 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
SHMT2-219ENST00000555563 TRBV7-6A0A0J9YX20 115 aa7.86□□□□□ -1.15
SHMT2-219ENST00000555563 A0A1B0GWB2 263 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 A4D1N5 150 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 SPRR1BP22528 89 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 PAM16Q9Y3D7 125 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 LPAP08519 4548 aa7.85□□□□□ -1.15
SHMT2-219ENST00000555563 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
SHMT2-219ENST00000555563 SMIM11BQ8TCY0 68 aa7.84□□□□□ -1.15
SHMT2-219ENST00000555563 SPINK1P00995 79 aa7.83□□□□□ -1.16
SHMT2-219ENST00000555563 DLEU1O43261 78 aa7.82□□□□□ -1.16
SHMT2-219ENST00000555563 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
SHMT2-219ENST00000555563 C14orf144Q96I85 54 aa7.82□□□□□ -1.16
SHMT2-219ENST00000555563 HIST1H4GQ99525 98 aa7.82□□□□□ -1.16
SHMT2-219ENST00000555563 VAMP8Q9BV40 100 aa7.82□□□□□ -1.16
SHMT2-219ENST00000555563 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
SHMT2-219ENST00000555563 C12orf57Q99622 126 aa7.81□□□□□ -1.16
SHMT2-219ENST00000555563 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
SHMT2-219ENST00000555563 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
SHMT2-219ENST00000555563 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
SHMT2-219ENST00000555563 TAL2Q16559 108 aa7.79□□□□□ -1.16
SHMT2-219ENST00000555563 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
SHMT2-219ENST00000555563 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
SHMT2-219ENST00000555563 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
SHMT2-219ENST00000555563 Q1RN00 199 aa7.78□□□□□ -1.16
SHMT2-219ENST00000555563 C2orf91Q6ZV80 131 aa7.78□□□□□ -1.16
SHMT2-219ENST00000555563 IGLV5-48A0A075B6I7 105 aa7.77□□□□□ -1.17
SHMT2-219ENST00000555563 LINC01547P58512 204 aaPredicted RBP7.77□□□□□ -1.17
SHMT2-219ENST00000555563 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
SHMT2-219ENST00000555563 Q8N377 158 aa7.77□□□□□ -1.17
SHMT2-219ENST00000555563 NHP2Q9NX24 153 aaKnown RBP7.77□□□□□ -1.17
SHMT2-219ENST00000555563 HIGD1BQ9P298 99 aa7.77□□□□□ -1.17
SHMT2-219ENST00000555563 SMCPP49901 116 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-219ENST00000555563 VAMP3Q15836 100 aa7.75□□□□□ -1.17
SHMT2-219ENST00000555563 PYY3Q5JQD4 70 aa7.75□□□□□ -1.17
SHMT2-219ENST00000555563 SMIM29Q86T20 159 aa7.75□□□□□ -1.17
SHMT2-219ENST00000555563 LINC00575Q6W349 94 aa7.74□□□□□ -1.17
SHMT2-219ENST00000555563 SLC25A20O43772 301 aa7.73□□□□□ -1.17
SHMT2-219ENST00000555563 CDIP1Q9H305 208 aa7.73□□□□□ -1.17
SHMT2-219ENST00000555563 MUC2Q02817 5179 aa7.73□□□□□ -1.17
SHMT2-219ENST00000555563 CFC1BP0CG36 223 aa7.72□□□□□ -1.17
SHMT2-219ENST00000555563 CFC1P0CG37 223 aa7.72□□□□□ -1.17
SHMT2-219ENST00000555563 HRCT1Q6UXD1 115 aa7.72□□□□□ -1.17
SHMT2-219ENST00000555563 H7C2G1 150 aa7.71□□□□□ -1.18
SHMT2-219ENST00000555563 A0A0B4J2C4 111 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms