RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 IGLV6-57P01721 117 aa5.79□□□□□ -1.48
TDP1-210ENST00000554976 C22orf24Q9Y442 160 aa5.79□□□□□ -1.48
TDP1-210ENST00000554976 HECTD4Q9Y4D8 3996 aa5.79□□□□□ -1.48
TDP1-210ENST00000554976 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
TDP1-210ENST00000554976 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
TDP1-210ENST00000554976 VPREB1P12018 145 aa5.78□□□□□ -1.48
TDP1-210ENST00000554976 C9orf129Q5T035 196 aaKnown RBP5.78□□□□□ -1.48
TDP1-210ENST00000554976 RMI2Q96E14 147 aa5.78□□□□□ -1.48
TDP1-210ENST00000554976 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
TDP1-210ENST00000554976 SYCNQ0VAF6 134 aa5.77□□□□□ -1.49
TDP1-210ENST00000554976 KRTAP7-1Q8IUC3 87 aa5.77□□□□□ -1.49
TDP1-210ENST00000554976 LINC00167Q96N53 147 aa5.77□□□□□ -1.49
TDP1-210ENST00000554976 NCR3O14931 201 aa5.76□□□□□ -1.49
TDP1-210ENST00000554976 PLA2G2DQ9UNK4 145 aa5.76□□□□□ -1.49
TDP1-210ENST00000554976 A0A087WYN8 130 aa5.76□□□□□ -1.49
TDP1-210ENST00000554976 LRCOL1A6NCL2 159 aa5.76□□□□□ -1.49
TDP1-210ENST00000554976 DNAH17Q9UFH2 4485 aa5.76□□□□□ -1.49
TDP1-210ENST00000554976 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
TDP1-210ENST00000554976 CNBPP62633 177 aaKnown RBP5.75□□□□□ -1.49
TDP1-210ENST00000554976 IGLV5-37A0A075B6J1 123 aa5.75□□□□□ -1.49
TDP1-210ENST00000554976 Q6JHZ5 121 aa5.75□□□□□ -1.49
TDP1-210ENST00000554976 XAGE1AQ9HD64 81 aa5.75□□□□□ -1.49
TDP1-210ENST00000554976 INAFM2P0DMQ5 153 aa5.74□□□□□ -1.49
TDP1-210ENST00000554976 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
TDP1-210ENST00000554976 UBE2DNLQ8IWF7 75 aa5.74□□□□□ -1.49
TDP1-210ENST00000554976 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
TDP1-210ENST00000554976 H0YGX0 51 aa5.73□□□□□ -1.49
TDP1-210ENST00000554976 SERTAD4-AS1Q5TG53 156 aa5.73□□□□□ -1.49
TDP1-210ENST00000554976 Q6ZR54 194 aa5.73□□□□□ -1.49
TDP1-210ENST00000554976 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
TDP1-210ENST00000554976 LECT2O14960 151 aa5.72□□□□□ -1.49
TDP1-210ENST00000554976 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
TDP1-210ENST00000554976 M0R378 163 aa5.71□□□□□ -1.5
TDP1-210ENST00000554976 FP248Q71RG6 208 aaPredicted RBP5.71□□□□□ -1.5
TDP1-210ENST00000554976 TRBV7-6A0A0J9YX20 115 aa5.7□□□□□ -1.5
TDP1-210ENST00000554976 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
TDP1-210ENST00000554976 DNAH11Q96DT5 4516 aa5.7□□□□□ -1.5
TDP1-210ENST00000554976 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 FAM168BA1KXE4 195 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 C6orf99Q4VX62 202 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
TDP1-210ENST00000554976 PKD1P98161 4303 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 LINC00575Q6W349 94 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 Q8N814 137 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 FAT2Q9NYQ8 4349 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 KRTAP4-16G5E9R7 235 aaPredicted RBP5.69□□□□□ -1.5
TDP1-210ENST00000554976 FAM19A1Q7Z5A9 133 aa5.69□□□□□ -1.5
TDP1-210ENST00000554976 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
TDP1-210ENST00000554976 S100A7L2Q5SY68 101 aa5.68□□□□□ -1.5
TDP1-210ENST00000554976 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
TDP1-210ENST00000554976 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
TDP1-210ENST00000554976 C7orf33Q8WU49 177 aa5.68□□□□□ -1.5
TDP1-210ENST00000554976 DNAH8Q96JB1 4490 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 A0A087WVE0 104 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 H7BZZ5 65 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 BAALC-AS2P0C853 105 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 SPRR1AP35321 89 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 A0A096LNI7 61 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 C16orf90A8MZG2 172 aa5.67□□□□□ -1.5
TDP1-210ENST00000554976 ZNF73O43830 326 aaPredicted RBP5.67□□□□□ -1.5
TDP1-210ENST00000554976 IGKV3D-7A0A0C4DH55 119 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 DNAL4O96015 105 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 C14orf177Q52M58 125 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 DNAH5Q8TE73 4624 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 IGLV1-50A0A075B6I6 118 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 LINC00528Q8N1L1 170 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 GHRHP01286 108 aa5.66□□□□□ -1.5
TDP1-210ENST00000554976 BCE1O60756 84 aa5.65□□□□□ -1.5
TDP1-210ENST00000554976 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
TDP1-210ENST00000554976 PSCAO43653 123 aa5.65□□□□□ -1.51
TDP1-210ENST00000554976 C20orf197Q8N268 126 aa5.65□□□□□ -1.51
TDP1-210ENST00000554976 DIRC1Q969H9 104 aa5.65□□□□□ -1.51
TDP1-210ENST00000554976 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.51
TDP1-210ENST00000554976 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 ATP5EP56381 51 aaPredicted RBP5.64□□□□□ -1.51
TDP1-210ENST00000554976 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 A0A087WTM6 91 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 A0A1W2PNN7 141 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 LINC00476Q8WZB0 136 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
TDP1-210ENST00000554976 PRYO14603 147 aa5.63□□□□□ -1.51
TDP1-210ENST00000554976 M0R2N4 97 aa5.63□□□□□ -1.51
TDP1-210ENST00000554976 COX7BP24311 80 aa5.62□□□□□ -1.51
TDP1-210ENST00000554976 MRPL55Q7Z7F7 128 aaKnown RBP5.62□□□□□ -1.51
TDP1-210ENST00000554976 ORMDL1Q9P0S3 153 aa5.62□□□□□ -1.51
TDP1-210ENST00000554976 PANO1I0J062 215 aa5.62□□□□□ -1.51
TDP1-210ENST00000554976 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.61□□□□□ -1.51
TDP1-210ENST00000554976 CCKP06307 115 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 CD164Q04900 197 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 NKAPP1Q8N9T2 125 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 PRR15Q8IV56 129 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 TRAV7A0A075B6U4 112 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 Q9BRP9 147 aa5.61□□□□□ -1.51
TDP1-210ENST00000554976 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
TDP1-210ENST00000554976 LINC01547P58512 204 aaPredicted RBP5.6□□□□□ -1.51
TDP1-210ENST00000554976 LAMTOR3Q9UHA4 124 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms