RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CMYA5Q8N3K9 4069 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 ABCC5O15440 1437 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 TULP4Q9NRJ4 1543 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 NUP188Q5SRE5 1749 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 TRBV7-4A0A0J9YYF1 115 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 TMEM262E9PQX1 116 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 KRTDAPP60985 99 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 PRO1933Q9H354 126 aa-0.12□□□□□ -2.43
SCFD1-213ENST00000554776 DNAH2Q9P225 4427 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 GAPVD1Q14C86 1478 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 A0A087WVE0 104 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 H3BQ15 152 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 SMR3BP02814 79 aaPredicted RBP-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 DEFB123Q8N688 67 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 DNAJC13O75165 2243 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 AKAP9Q99996 3911 aa-0.13□□□□□ -2.43
SCFD1-213ENST00000554776 A0A0G2JND7 137 aa-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 GNGT2O14610 69 aa-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 SAA2P0DJI9 122 aaPredicted RBP-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 S100PP25815 95 aa-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 ZFYVE16Q7Z3T8 1539 aa-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 PDCD11Q14690 1871 aaKnown RBP-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 COL4A6Q14031 1691 aa-0.14□□□□□ -2.43
SCFD1-213ENST00000554776 PEG3Q9GZU2 1588 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 TIAM2Q8IVF5 1701 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 UBR3Q6ZT12 1888 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 ATP6V1G2-DDX39BF2Z307 99 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 S100A10P60903 97 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 C14orf144Q96I85 54 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 CGREF1Q99674 301 aa-0.15□□□□□ -2.43
SCFD1-213ENST00000554776 KLK9Q2XQG4 91 aa-0.16□□□□□ -2.44
SCFD1-213ENST00000554776 LINC00846Q9NV44 126 aa-0.16□□□□□ -2.44
SCFD1-213ENST00000554776 TJP1Q07157 1748 aa-0.16□□□□□ -2.44
SCFD1-213ENST00000554776 XRN1Q8IZH2 1706 aaKnown RBP-0.16□□□□□ -2.44
SCFD1-213ENST00000554776 MRC2Q9UBG0 1479 aa-0.16□□□□□ -2.44
SCFD1-213ENST00000554776 TMEM218A2RU14 115 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 C7orf77A4D0Y5 90 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 SMARCA2P51531 1590 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 KRTAP6-2Q3LI66 62 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 CACFD1Q9UGQ2 172 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 KIAA0556O60303 1618 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 PLEKHH2Q8IVE3 1493 aa-0.17□□□□□ -2.44
SCFD1-213ENST00000554776 RGPD8O14715 1765 aaPredicted RBP-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 RGPD5Q99666 1765 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 LOC730098B7Z3J9 87 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 SYS1-DBNDD2H3BUS1 97 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 M0R2T5 61 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 MT-ATP8P03928 68 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 KRTAP8-1Q8IUC2 63 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 PMCHL2Q9BQD1 86 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 ASXL1Q8IXJ9 1541 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 FMN2Q9NZ56 1722 aa-0.18□□□□□ -2.44
SCFD1-213ENST00000554776 SETBP1Q9Y6X0 1596 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 A0A1B0GU69 56 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 DEFB107AQ8IZN7 70 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 TCEAL7Q9BRU2 100 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 VAMP8Q9BV40 100 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 KNDC1Q76NI1 1749 aa-0.19□□□□□ -2.44
SCFD1-213ENST00000554776 A0A0G2JMZ2 1700 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 CDC42BPAQ5VT25 1732 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 PSMG4Q5JS54 123 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 DEFB105AQ8NG35 78 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 CRIPTQ9P021 101 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 AP4S1Q9Y587 144 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 PAPPA2Q9BXP8 1791 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 ALKQ9UM73 1620 aa-0.2□□□□□ -2.44
SCFD1-213ENST00000554776 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 MLH3Q9UHC1 1453 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 BCORQ6W2J9 1755 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 SLIT1O75093 1534 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 TRAV30A0A087WSZ9 112 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 PMCHL1Q16048 86 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 C6orf201Q7Z4U5 140 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 ANKRD36BQ8N2N9 1353 aa-0.21□□□□□ -2.44
SCFD1-213ENST00000554776 LYNX1G3V0Z9 82 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 MT1BP07438 61 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 MT1GP13640 62 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 RBP2P50120 134 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 MT1HP80294 61 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 USMG5Q96IX5 58 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 APLNQ9ULZ1 77 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 ZNF831Q5JPB2 1677 aa-0.22□□□□□ -2.44
SCFD1-213ENST00000554776 TRBV25-1A0A075B6N4 114 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 LCE6AA0A183 80 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 H0YAA0 97 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 H3BQF6 201 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 H7BZZ5 65 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 NDUFC1O43677 76 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 UQCRHP07919 91 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 COX8AP10176 69 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 GNGT1P63211 74 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 DEFA5Q01523 94 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 MT1MQ8N339 61 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 CNTLNQ9NXG0 1405 aa-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 PRDM15P57071 1507 aaPredicted RBP-0.23□□□□□ -2.45
SCFD1-213ENST00000554776 CICQ96RK0 1608 aaPredicted RBP-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 RGPD3A6NKT7 1758 aaPredicted RBP-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 CPSF4LA6NMK7 179 aaKnown RBP-0.24□□□□□ -2.45
SCFD1-213ENST00000554776 H0Y9P7 68 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms