RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 C6orf48Q9UBA6 75 aa7.95□□□□□ -1.14
SHMT2-214ENST00000554604 H0YGX0 51 aa7.94□□□□□ -1.14
SHMT2-214ENST00000554604 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
SHMT2-214ENST00000554604 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
SHMT2-214ENST00000554604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-214ENST00000554604 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
SHMT2-214ENST00000554604 SLPIP03973 132 aa7.93□□□□□ -1.14
SHMT2-214ENST00000554604 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
SHMT2-214ENST00000554604 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
SHMT2-214ENST00000554604 CBY1Q9Y3M2 126 aa7.93□□□□□ -1.14
SHMT2-214ENST00000554604 PANO1I0J062 215 aa7.92□□□□□ -1.14
SHMT2-214ENST00000554604 J3QL48 77 aa7.92□□□□□ -1.14
SHMT2-214ENST00000554604 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
SHMT2-214ENST00000554604 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
SHMT2-214ENST00000554604 Q6ZRU5 148 aa7.9□□□□□ -1.14
SHMT2-214ENST00000554604 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
SHMT2-214ENST00000554604 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
SHMT2-214ENST00000554604 Q8NDZ9 215 aa7.89□□□□□ -1.15
SHMT2-214ENST00000554604 A0A087WYN8 130 aa7.88□□□□□ -1.15
SHMT2-214ENST00000554604 KRTAP10-4P60372 401 aaPredicted RBP7.88□□□□□ -1.15
SHMT2-214ENST00000554604 PRR3P79522 188 aaKnown RBP7.88□□□□□ -1.15
SHMT2-214ENST00000554604 SYCNQ0VAF6 134 aa7.88□□□□□ -1.15
SHMT2-214ENST00000554604 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SHMT2-214ENST00000554604 IGKV2-24A0A0C4DH68 120 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 A0A1B0GX51 115 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 NCR3O14931 201 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 PKIGQ9Y2B9 76 aa7.87□□□□□ -1.15
SHMT2-214ENST00000554604 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
SHMT2-214ENST00000554604 HERC1Q15751 4861 aa7.86□□□□□ -1.15
SHMT2-214ENST00000554604 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
SHMT2-214ENST00000554604 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
SHMT2-214ENST00000554604 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
SHMT2-214ENST00000554604 DNAL4O96015 105 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 VPREB1P12018 145 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 LINC00474Q9P2X8 69 aa7.84□□□□□ -1.15
SHMT2-214ENST00000554604 A0A096LNI7 61 aa7.83□□□□□ -1.16
SHMT2-214ENST00000554604 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
SHMT2-214ENST00000554604 RPL18AQ02543 176 aaKnown RBP7.83□□□□□ -1.16
SHMT2-214ENST00000554604 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
SHMT2-214ENST00000554604 OXTP01178 125 aa7.82□□□□□ -1.16
SHMT2-214ENST00000554604 M0R378 163 aa7.81□□□□□ -1.16
SHMT2-214ENST00000554604 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SHMT2-214ENST00000554604 Q6ZRP5 223 aa7.81□□□□□ -1.16
SHMT2-214ENST00000554604 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
SHMT2-214ENST00000554604 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
SHMT2-214ENST00000554604 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
SHMT2-214ENST00000554604 LOC107984640A0A0U1RRK4 108 aa7.8□□□□□ -1.16
SHMT2-214ENST00000554604 SNCGO76070 127 aa7.8□□□□□ -1.16
SHMT2-214ENST00000554604 GAGE2EQ4V326 116 aa7.8□□□□□ -1.16
SHMT2-214ENST00000554604 GAGE2DQ9UEU5 116 aa7.8□□□□□ -1.16
SHMT2-214ENST00000554604 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
SHMT2-214ENST00000554604 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
SHMT2-214ENST00000554604 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
SHMT2-214ENST00000554604 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
SHMT2-214ENST00000554604 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
SHMT2-214ENST00000554604 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
SHMT2-214ENST00000554604 FAM240AA0A1B0GVK7 77 aa7.78□□□□□ -1.16
SHMT2-214ENST00000554604 C9orf129Q5T035 196 aaKnown RBP7.78□□□□□ -1.16
SHMT2-214ENST00000554604 DIRC1Q969H9 104 aa7.78□□□□□ -1.16
SHMT2-214ENST00000554604 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
SHMT2-214ENST00000554604 IGLV5-37A0A075B6J1 123 aa7.76□□□□□ -1.17
SHMT2-214ENST00000554604 OBSCN-AS1Q96MR7 158 aa7.76□□□□□ -1.17
SHMT2-214ENST00000554604 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
SHMT2-214ENST00000554604 ZNF73O43830 326 aaPredicted RBP7.75□□□□□ -1.17
SHMT2-214ENST00000554604 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 H3BQ85 93 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 TMEM256-PLSCR3K7ERE1 68 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 ACYP1P07311 99 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 COX7BP24311 80 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
SHMT2-214ENST00000554604 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
SHMT2-214ENST00000554604 SERTAD4-AS1Q5TG53 156 aa7.73□□□□□ -1.17
SHMT2-214ENST00000554604 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
SHMT2-214ENST00000554604 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
SHMT2-214ENST00000554604 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
SHMT2-214ENST00000554604 KCNQ1DNQ9H478 68 aa7.71□□□□□ -1.18
SHMT2-214ENST00000554604 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
SHMT2-214ENST00000554604 GHRHP01286 108 aa7.7□□□□□ -1.18
SHMT2-214ENST00000554604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.7□□□□□ -1.18
SHMT2-214ENST00000554604 PRYO14603 147 aa7.69□□□□□ -1.18
SHMT2-214ENST00000554604 PCP4P48539 62 aa7.68□□□□□ -1.18
SHMT2-214ENST00000554604 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
SHMT2-214ENST00000554604 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
SHMT2-214ENST00000554604 Q6ZQY7 126 aa7.67□□□□□ -1.18
SHMT2-214ENST00000554604 KRTAP7-1Q8IUC3 87 aa7.67□□□□□ -1.18
SHMT2-214ENST00000554604 C14orf132Q9NPU4 83 aa7.67□□□□□ -1.18
SHMT2-214ENST00000554604 IGLV1-50A0A075B6I6 118 aa7.66□□□□□ -1.18
SHMT2-214ENST00000554604 FAM168BA1KXE4 195 aa7.66□□□□□ -1.18
SHMT2-214ENST00000554604 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
SHMT2-214ENST00000554604 REG3GQ6UW15 175 aa7.66□□□□□ -1.18
SHMT2-214ENST00000554604 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
SHMT2-214ENST00000554604 SPRR1AP35321 89 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms