RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
SCFD1-212ENST00000554486 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 IGLV7-46A0A075B6I9 117 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 A0A1W2PNN7 141 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 EPM2AB3EWF7 344 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 TMEM238C9JI98 176 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 NPC2P61916 151 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
SCFD1-212ENST00000554486 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
SCFD1-212ENST00000554486 IFITM1P13164 125 aa3.94□□□□□ -1.78
SCFD1-212ENST00000554486 Q6ZVH6 145 aa3.94□□□□□ -1.78
SCFD1-212ENST00000554486 MUSTN1Q8IVN3 82 aa3.94□□□□□ -1.78
SCFD1-212ENST00000554486 LINC00474Q9P2X8 69 aa3.94□□□□□ -1.78
SCFD1-212ENST00000554486 TSTD3H0UI37 97 aa3.93□□□□□ -1.78
SCFD1-212ENST00000554486 HNRNPA3P51991 378 aaKnown RBP3.93□□□□□ -1.78
SCFD1-212ENST00000554486 PRR3P79522 188 aaKnown RBP3.93□□□□□ -1.78
SCFD1-212ENST00000554486 HAMPP81172 84 aa3.93□□□□□ -1.78
SCFD1-212ENST00000554486 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
SCFD1-212ENST00000554486 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
SCFD1-212ENST00000554486 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
SCFD1-212ENST00000554486 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
SCFD1-212ENST00000554486 RYR1P21817 5038 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 NDUFC2O95298 119 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 HSD52Q0P140 79 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 TAL2Q16559 108 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 SCXQ7RTU7 201 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 CIRBP-AS1Q8TBR5 109 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 DPH3Q96FX2 82 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 HSPG2P98160 4391 aa3.92□□□□□ -1.78
SCFD1-212ENST00000554486 NCR3O14931 201 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 FXYD2P54710 66 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 CTAG1AP78358 180 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 PHF5AQ7RTV0 110 aaKnown RBP3.91□□□□□ -1.78
SCFD1-212ENST00000554486 CEND1Q8N111 149 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 COPS9Q8WXC6 57 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 C22orf24Q9Y442 160 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
SCFD1-212ENST00000554486 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.78
SCFD1-212ENST00000554486 TRBV10-2A0A0K0K1G8 114 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 M0QXV9 152 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 M0R378 163 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 DDTP30046 118 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 NKAPP1Q8N9T2 125 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 Q8NBF4 154 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 C7orf33Q8WU49 177 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
SCFD1-212ENST00000554486 BVES-AS1Q5T3Y7 98 aa3.89□□□□□ -1.79
SCFD1-212ENST00000554486 MRPL55Q7Z7F7 128 aaKnown RBP3.89□□□□□ -1.79
SCFD1-212ENST00000554486 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
SCFD1-212ENST00000554486 RPL37AP8A6NKH3 93 aa3.88□□□□□ -1.79
SCFD1-212ENST00000554486 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
SCFD1-212ENST00000554486 HINT1P49773 126 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-212ENST00000554486 Q6ZVQ6 151 aa3.88□□□□□ -1.79
SCFD1-212ENST00000554486 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
SCFD1-212ENST00000554486 IGLV1-50A0A075B6I6 118 aa3.87□□□□□ -1.79
SCFD1-212ENST00000554486 TRBV10-3A0A0K0K1G6 114 aa3.87□□□□□ -1.79
SCFD1-212ENST00000554486 PCP4L1A6NKN8 68 aa3.87□□□□□ -1.79
SCFD1-212ENST00000554486 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
SCFD1-212ENST00000554486 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 A0A1B0GWB2 263 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 K7ERJ3 54 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 M0R143 59 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 SMR3BP02814 79 aaPredicted RBP3.86□□□□□ -1.79
SCFD1-212ENST00000554486 RPL13AP40429 203 aaKnown RBP3.86□□□□□ -1.79
SCFD1-212ENST00000554486 UBE2BP63146 152 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 S100A7L2Q5SY68 101 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 OR13C6PQ8NH95 151 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 TMEM126AQ9H061 195 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 KCNQ1DNQ9H478 68 aa3.86□□□□□ -1.79
SCFD1-212ENST00000554486 NHP2Q9NX24 153 aaKnown RBP3.86□□□□□ -1.79
SCFD1-212ENST00000554486 SRRM2Q9UQ35 2752 aaKnown RBP3.86□□□□□ -1.79
SCFD1-212ENST00000554486 A6NDN8 102 aa3.85□□□□□ -1.79
SCFD1-212ENST00000554486 RAB37Q96AX2 223 aa3.85□□□□□ -1.79
SCFD1-212ENST00000554486 PSORS1C2Q9UIG4 136 aa3.85□□□□□ -1.79
SCFD1-212ENST00000554486 FAT1Q14517 4588 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 TRAV23DV6A0A075B6W5 121 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-212ENST00000554486 SPRR1AP35321 89 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-212ENST00000554486 BATFQ16520 125 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 Q8N377 158 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 SMIM11BQ8TCY0 68 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 SNHG12Q9BXW3 62 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.79
SCFD1-212ENST00000554486 H7C2G1 150 aa3.83□□□□□ -1.8
SCFD1-212ENST00000554486 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
SCFD1-212ENST00000554486 REG3GQ6UW15 175 aa3.83□□□□□ -1.8
SCFD1-212ENST00000554486 HERC2O95714 4834 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 ZNF73O43830 326 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-212ENST00000554486 BCE1O60756 84 aa3.82□□□□□ -1.8
SCFD1-212ENST00000554486 TSPAN13O95857 204 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms