RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ARMS2P0C7Q2 107 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 RPL28P46779 137 aaKnown RBP2.87□□□□□ -1.95
ATXN3-225ENST00000554214 FXYD7P58549 80 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 C9orf116Q5BN46 136 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-225ENST00000554214 Q8IYB0 196 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 TMEM254Q8TBM7 123 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 CHCHD10Q8WYQ3 142 aaPredicted RBP2.87□□□□□ -1.95
ATXN3-225ENST00000554214 OBSCN-AS1Q96MR7 158 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 XAGE1AQ9HD64 81 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 TMEM14BQ9NUH8 114 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 TMEM14CQ9P0S9 112 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 KIAA1109Q2LD37 5005 aa2.87□□□□□ -1.95
ATXN3-225ENST00000554214 IGKV1D-42A0A075B6H8 117 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 TRBV6-8A0A0A6YYG3 113 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 TRBV7-4A0A0J9YYF1 115 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 C16orf90A8MZG2 172 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 H3BUX3 64 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 I3L3M4 83 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 LEPROTO15243 131 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 CD24P25063 80 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 PDE6HQ13956 83 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 C10orf99Q6UWK7 81 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 CASC2Q6XLA1 102 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 LINC00846Q9NV44 126 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 ZNRD1Q9P1U0 126 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 KIAA2026Q5HYC2 2103 aa2.86□□□□□ -1.95
ATXN3-225ENST00000554214 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 IGKV1-27A0A075B6S5 117 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 IGKV1-39P01597 117 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 TRGV3P03979 118 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 IGKV1D-39P04432 117 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 DEFA4P12838 97 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 Q86TA4 180 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 SNURFQ9Y675 71 aa2.85□□□□□ -1.95
ATXN3-225ENST00000554214 IGIPA6NJ69 53 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 H0YGX0 51 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 M0R1W7 72 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 NDUFB1O75438 58 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 SAA2P0DJI9 122 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-225ENST00000554214 LINC00315P59091 139 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 ELOF1P60002 83 aaKnown RBP2.84□□□□□ -1.95
ATXN3-225ENST00000554214 EGFEM1PQ0D2K5 195 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 MIAQ16674 131 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 Q5VV11 94 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 TMEM61Q8N0U2 210 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 WFDC9Q8NEX5 89 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 RETNLBQ9BQ08 111 aa2.84□□□□□ -1.95
ATXN3-225ENST00000554214 PLECQ15149 4684 aaKnown RBP2.83□□□□□ -1.96
ATXN3-225ENST00000554214 IGLV2-18A0A075B6J9 118 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 A6NED7 52 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 IGLV3-1P01715 115 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 PDE6GP18545 87 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 RPS27P42677 84 aaKnown RBP2.83□□□□□ -1.96
ATXN3-225ENST00000554214 NREPQ16612 68 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 C10orf128Q5T292 105 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 FAM74A4Q5TZK3 123 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 C10orf113Q5VZT2 155 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 ENHOQ6UWT2 76 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 LYPD1Q8N2G4 141 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 CNFNQ9BYD5 112 aa2.83□□□□□ -1.96
ATXN3-225ENST00000554214 IGHV7-81A0A0B4J1V7 117 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 IGHV3-72A0A0B4J1Y9 119 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 LOC101927531A0A1B0GV80 90 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 H3BQ85 93 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 PSCAO43653 123 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 HCP5Q6MZN7 132 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 LYZL1Q6UWQ5 148 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 C7orf33Q8WU49 177 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 SMIM2Q9BVW6 85 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 MRPL36Q9P0J6 103 aaKnown RBP2.82□□□□□ -1.96
ATXN3-225ENST00000554214 ALMS1Q8TCU4 4167 aa2.82□□□□□ -1.96
ATXN3-225ENST00000554214 COX7A1P24310 79 aa2.81□□□□□ -1.96
ATXN3-225ENST00000554214 LINC00322Q6ZN03 302 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-225ENST00000554214 AMELXQ99217 191 aa2.81□□□□□ -1.96
ATXN3-225ENST00000554214 CDC42SE2Q9NRR3 84 aa2.81□□□□□ -1.96
ATXN3-225ENST00000554214 TRAV12-3A0A0B4J271 114 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 TRAV21A0A0B4J279 112 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 IGKV1-12A0A0C4DH73 117 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 IGKV1D-12P01611 117 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 IGHV3-43DP0DP04 118 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 DEFB136Q30KP8 78 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 C1orf64Q8NEQ6 169 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 LINC00574Q9H8X3 128 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 C14orf132Q9NPU4 83 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 DNAH10Q8IVF4 4471 aa2.8□□□□□ -1.96
ATXN3-225ENST00000554214 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 IGKV1-6A0A0C4DH72 117 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 A6NDX4 124 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 BPY2O14599 106 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 LY6G6CO95867 125 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 IGHV3-48P01763 117 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 MOBPQ13875 183 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 PIGYQ3MUY2 71 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 FAM27BQ5VT28 67 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 Q9BRP9 147 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms