RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 TRAV23DV6A0A075B6W5 121 aa13.78□□□□□ -0.2
NEK9-203ENST00000553945 OR13C6PQ8NH95 151 aa13.78□□□□□ -0.2
NEK9-203ENST00000553945 B5MCH6 92 aa13.77□□□□□ -0.21
NEK9-203ENST00000553945 FAM229BQ4G0N7 80 aa13.76□□□□□ -0.21
NEK9-203ENST00000553945 COPS9Q8WXC6 57 aa13.76□□□□□ -0.21
NEK9-203ENST00000553945 IFITM1P13164 125 aa13.75□□□□□ -0.21
NEK9-203ENST00000553945 Q6ZVH6 145 aa13.75□□□□□ -0.21
NEK9-203ENST00000553945 TYMSOSQ8TAI1 123 aa13.75□□□□□ -0.21
NEK9-203ENST00000553945 SMCR5Q8TEV8 140 aa13.75□□□□□ -0.21
NEK9-203ENST00000553945 CBY1Q9Y3M2 126 aa13.74□□□□□ -0.21
NEK9-203ENST00000553945 LINC00518Q8N0U6 118 aa13.73□□□□□ -0.21
NEK9-203ENST00000553945 ZNF706Q9Y5V0 76 aaPredicted RBP13.73□□□□□ -0.21
NEK9-203ENST00000553945 ZNF73O43830 326 aaPredicted RBP13.72□□□□□ -0.21
NEK9-203ENST00000553945 KRTAP13-2Q52LG2 175 aa13.72□□□□□ -0.21
NEK9-203ENST00000553945 MUSTN1Q8IVN3 82 aa13.72□□□□□ -0.21
NEK9-203ENST00000553945 SPRR4Q96PI1 79 aa13.72□□□□□ -0.21
NEK9-203ENST00000553945 Q6ZRX8 168 aa13.71□□□□□ -0.21
NEK9-203ENST00000553945 PPDPFQ9H3Y8 114 aa13.7□□□□□ -0.22
NEK9-203ENST00000553945 Q9BRP9 147 aa13.69□□□□□ -0.22
NEK9-203ENST00000553945 ERC2-IT1O76042 136 aa13.67□□□□□ -0.22
NEK9-203ENST00000553945 HINT1P49773 126 aaPredicted RBP13.67□□□□□ -0.22
NEK9-203ENST00000553945 JOSD1Q15040 202 aaPredicted RBP13.67□□□□□ -0.22
NEK9-203ENST00000553945 A6NDN8 102 aa13.63□□□□□ -0.23
NEK9-203ENST00000553945 COX8AP10176 69 aa13.63□□□□□ -0.23
NEK9-203ENST00000553945 C3orf22Q8N5N4 141 aa13.63□□□□□ -0.23
NEK9-203ENST00000553945 TMA7Q9Y2S6 64 aaKnown RBP13.63□□□□□ -0.23
NEK9-203ENST00000553945 TSPAN13O95857 204 aa13.62□□□□□ -0.23
NEK9-203ENST00000553945 GAGE2AQ6NT46 116 aa13.61□□□□□ -0.23
NEK9-203ENST00000553945 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
NEK9-203ENST00000553945 C6orf99Q4VX62 202 aa13.6□□□□□ -0.23
NEK9-203ENST00000553945 SPATA45Q537H7 98 aa13.59□□□□□ -0.23
NEK9-203ENST00000553945 VAMP8Q9BV40 100 aa13.59□□□□□ -0.23
NEK9-203ENST00000553945 LINC00483Q53H64 154 aa13.58□□□□□ -0.24
NEK9-203ENST00000553945 LINC00304Q8N9R0 145 aa13.58□□□□□ -0.24
NEK9-203ENST00000553945 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
NEK9-203ENST00000553945 COX7BP24311 80 aa13.57□□□□□ -0.24
NEK9-203ENST00000553945 C14orf144Q96I85 54 aa13.57□□□□□ -0.24
NEK9-203ENST00000553945 DLEU1O43261 78 aa13.56□□□□□ -0.24
NEK9-203ENST00000553945 HIST1H4GQ99525 98 aa13.55□□□□□ -0.24
NEK9-203ENST00000553945 LRP2P98164 4655 aa13.54□□□□□ -0.24
NEK9-203ENST00000553945 A4D1N5 150 aa13.54□□□□□ -0.24
NEK9-203ENST00000553945 ELOF1P60002 83 aaKnown RBP13.54□□□□□ -0.24
NEK9-203ENST00000553945 ST20-AS1Q8NBB2 130 aa13.54□□□□□ -0.24
NEK9-203ENST00000553945 DHRS4-AS1Q9P1J3 65 aa13.54□□□□□ -0.24
NEK9-203ENST00000553945 UBR4Q5T4S7 5183 aa13.51□□□□□ -0.25
NEK9-203ENST00000553945 TRBV7-6A0A0J9YX20 115 aa13.51□□□□□ -0.25
NEK9-203ENST00000553945 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
NEK9-203ENST00000553945 SMIM11BQ8TCY0 68 aa13.5□□□□□ -0.25
NEK9-203ENST00000553945 PRR4Q16378 134 aa13.49□□□□□ -0.25
NEK9-203ENST00000553945 SLC25A34Q6PIV7 304 aa13.49□□□□□ -0.25
NEK9-203ENST00000553945 A0A1B0GWB2 263 aa13.48□□□□□ -0.25
NEK9-203ENST00000553945 PYY3Q5JQD4 70 aa13.48□□□□□ -0.25
NEK9-203ENST00000553945 Q8NBF4 154 aa13.48□□□□□ -0.25
NEK9-203ENST00000553945 MOBPQ13875 183 aa13.47□□□□□ -0.25
NEK9-203ENST00000553945 C12orf57Q99622 126 aa13.47□□□□□ -0.25
NEK9-203ENST00000553945 HIGD1BQ9P298 99 aa13.46□□□□□ -0.25
NEK9-203ENST00000553945 C4orf48Q5BLP8 95 aa13.45□□□□□ -0.26
NEK9-203ENST00000553945 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
NEK9-203ENST00000553945 LPAP08519 4548 aa13.44□□□□□ -0.26
NEK9-203ENST00000553945 C2orf91Q6ZV80 131 aa13.43□□□□□ -0.26
NEK9-203ENST00000553945 CTAG1AP78358 180 aa13.41□□□□□ -0.26
NEK9-203ENST00000553945 C9orf153Q5TBE3 101 aa13.41□□□□□ -0.26
NEK9-203ENST00000553945 SPRR1BP22528 89 aa13.4□□□□□ -0.26
NEK9-203ENST00000553945 VAMP3Q15836 100 aa13.4□□□□□ -0.26
NEK9-203ENST00000553945 TAL2Q16559 108 aa13.4□□□□□ -0.26
NEK9-203ENST00000553945 SSBP3-AS1Q7Z2R9 100 aa13.4□□□□□ -0.26
NEK9-203ENST00000553945 DEFB105AQ8NG35 78 aa13.4□□□□□ -0.26
NEK9-203ENST00000553945 RETNLBQ9BQ08 111 aa13.39□□□□□ -0.27
NEK9-203ENST00000553945 NHP2Q9NX24 153 aaKnown RBP13.37□□□□□ -0.27
NEK9-203ENST00000553945 CFC1BP0CG36 223 aa13.35□□□□□ -0.27
NEK9-203ENST00000553945 CFC1P0CG37 223 aa13.35□□□□□ -0.27
NEK9-203ENST00000553945 LAMTOR3Q9UHA4 124 aa13.35□□□□□ -0.27
NEK9-203ENST00000553945 TEX49A0A1B0GTD5 131 aa13.34□□□□□ -0.27
NEK9-203ENST00000553945 SLC25A20O43772 301 aa13.34□□□□□ -0.27
NEK9-203ENST00000553945 RAB37Q96AX2 223 aa13.34□□□□□ -0.27
NEK9-203ENST00000553945 H7C2G1 150 aa13.33□□□□□ -0.28
NEK9-203ENST00000553945 SPINK1P00995 79 aa13.33□□□□□ -0.28
NEK9-203ENST00000553945 CEND1Q8N111 149 aa13.33□□□□□ -0.28
NEK9-203ENST00000553945 Q1RN00 199 aa13.31□□□□□ -0.28
NEK9-203ENST00000553945 LINC00575Q6W349 94 aa13.31□□□□□ -0.28
NEK9-203ENST00000553945 IGLV5-48A0A075B6I7 105 aa13.29□□□□□ -0.28
NEK9-203ENST00000553945 A0A0B4J2C4 111 aa13.29□□□□□ -0.28
NEK9-203ENST00000553945 LINC01547P58512 204 aaPredicted RBP13.29□□□□□ -0.28
NEK9-203ENST00000553945 TMEM238LA0A1B0GVL6 79 aa13.27□□□□□ -0.29
NEK9-203ENST00000553945 hADV29S1A0JD25 119 aa13.27□□□□□ -0.29
NEK9-203ENST00000553945 A6NJY4 79 aa13.27□□□□□ -0.29
NEK9-203ENST00000553945 BVES-AS1Q5T3Y7 98 aa13.27□□□□□ -0.29
NEK9-203ENST00000553945 FXYD2P54710 66 aa13.25□□□□□ -0.29
NEK9-203ENST00000553945 SMIM29Q86T20 159 aa13.25□□□□□ -0.29
NEK9-203ENST00000553945 Q8N377 158 aa13.24□□□□□ -0.29
NEK9-203ENST00000553945 IGLV7-46A0A075B6I9 117 aa13.23□□□□□ -0.29
NEK9-203ENST00000553945 RPS29P62273 56 aaKnown RBP13.23□□□□□ -0.29
NEK9-203ENST00000553945 HSD52Q0P140 79 aa13.23□□□□□ -0.29
NEK9-203ENST00000553945 UQCR10Q9UDW1 63 aa13.23□□□□□ -0.29
NEK9-203ENST00000553945 Q6ZQY7 126 aa13.22□□□□□ -0.29
NEK9-203ENST00000553945 PRO1854Q9UHT4 67 aa13.22□□□□□ -0.29
NEK9-203ENST00000553945 HRCT1Q6UXD1 115 aa13.2□□□□□ -0.3
NEK9-203ENST00000553945 PRO1933Q9H354 126 aa13.2□□□□□ -0.3
NEK9-203ENST00000553945 FP248Q71RG6 208 aaPredicted RBP13.18□□□□□ -0.3
NEK9-203ENST00000553945 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms