RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SMIM15Q7Z3B0 74 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 ATP5L2Q7Z4Y8 100 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 FAM19A1Q7Z5A9 133 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 BAGE2Q86Y30 109 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 MIEN1Q9BRT3 115 aa3.02□□□□□ -1.93
ATXN3-223ENST00000553686 ZNF706Q9Y5V0 76 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-223ENST00000553686 TRBV20OR9-2A0A075B6H5 130 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 MT2AP02795 61 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 IGLC6P0CF74 106 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 PRLHP81277 87 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 KIAA0087Q14695 138 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 CENPWQ5EE01 88 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 C2orf82Q6UX34 121 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 SSBP3-AS1Q7Z2R9 100 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 FAM104AQ969W3 186 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 RPL39LQ96EH5 51 aaKnown RBP3.01□□□□□ -1.93
ATXN3-223ENST00000553686 VAMP8Q9BV40 100 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 PRO1933Q9H354 126 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 V9GYV3 84 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
ATXN3-223ENST00000553686 TRBV6-5A0A0K0K1A5 114 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 A0A1B0GV90 55 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 A0A1B0GW15 77 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 C9orf92A6NGG3 77 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 K7EN84 100 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 CKS1BP61024 79 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 RNASE13Q5GAN3 156 aaKnown RBP3□□□□□ -1.93
ATXN3-223ENST00000553686 COL5A1-AS1Q5SY13 56 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 TMEM136Q6ZRR5 245 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 LINC01561Q8N1V8 128 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 NKAPP1Q8N9T2 125 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 BORCS7Q96B45 105 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 CHCHD1Q96BP2 118 aaKnown RBP3□□□□□ -1.93
ATXN3-223ENST00000553686 SPRR4Q96PI1 79 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 ST20Q9HBF5 79 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 UQCR10Q9UDW1 63 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 NAT8BQ9UHF3 227 aa3□□□□□ -1.93
ATXN3-223ENST00000553686 A8MWL6 223 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 LGALS3P17931 250 aaKnown RBP2.99□□□□□ -1.93
ATXN3-223ENST00000553686 FCER1GP30273 86 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 C6orf226Q5I0X4 101 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 Q8N9L7 120 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 TIMM21Q9BVV7 248 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 HIGD2AQ9BW72 106 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 SNHG12Q9BXW3 62 aa2.99□□□□□ -1.93
ATXN3-223ENST00000553686 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 TRBV27A0A0K0K1C4 114 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 MT1FP04733 61 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-223ENST00000553686 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 E9PLD3 99 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 IGLV6-57P01721 117 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 POLR2KP53803 58 aaKnown RBP2.97□□□□□ -1.93
ATXN3-223ENST00000553686 RPL37P61927 97 aaKnown RBP2.97□□□□□ -1.93
ATXN3-223ENST00000553686 HBBP68871 147 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 Q6ZUT4 128 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 TMEM126AQ9H061 195 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 RNASE7Q9H1E1 156 aaKnown RBP2.97□□□□□ -1.93
ATXN3-223ENST00000553686 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 LAMTOR2Q9Y2Q5 125 aa2.97□□□□□ -1.93
ATXN3-223ENST00000553686 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
ATXN3-223ENST00000553686 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 MRPL54Q6P161 138 aaKnown RBP2.95□□□□□ -1.94
ATXN3-223ENST00000553686 Q6ZN92 141 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 CNFNQ9BYD5 112 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 TOMM7Q9P0U1 55 aa2.95□□□□□ -1.94
ATXN3-223ENST00000553686 A0A1B0GUT8 65 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 TMEM238C9JI98 176 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 F8VRH5 84 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 M0R378 163 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 PPP1R17O96001 155 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 MRPS36P82909 103 aaKnown RBP2.94□□□□□ -1.94
ATXN3-223ENST00000553686 MOBPQ13875 183 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 Q8IZM0 81 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 SPANXA1Q9NS26 97 aa2.94□□□□□ -1.94
ATXN3-223ENST00000553686 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 PPBPP02775 128 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 SEC11AP67812 179 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 KRTAP2-1Q9BYU5 128 aa2.93□□□□□ -1.94
ATXN3-223ENST00000553686 TRBV20-1A0A075B6N2 111 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms