RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ZNF815PA8K554 130 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 CIRBPQ14011 172 aaKnown RBP4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 Q6ZRP5 223 aa4.01□□□□□ -1.77
DEPDC4-210ENST00000551642 A0A096LNI7 61 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 A0A0J9YXY3 114 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 TIMM17BO60830 172 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 SMIM6P0DI80 62 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 COX8AP10176 69 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PFN2P35080 140 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
DEPDC4-210ENST00000551642 SPATA45Q537H7 98 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PCP2Q8IVA1 136 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 SPACA4Q8TDM5 124 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 TTTY13Q9BZ97 58 aa4□□□□□ -1.77
DEPDC4-210ENST00000551642 PANO1I0J062 215 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 DLEU1O43261 78 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 SMIM13P0DJ93 91 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
DEPDC4-210ENST00000551642 IGKV2-24A0A0C4DH68 120 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 LOC107984156A0A0G2JMH3 177 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 CHTF8P0CG12 524 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 LINC00158P58513 81 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 DSCR10P59022 87 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 S100A12P80511 92 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 UBE2V1Q13404 147 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 C9orf129Q5T035 196 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 SCGB1D4Q6XE38 83 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 ARL17AQ8IVW1 177 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 PLAC8Q9NZF1 115 aa3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-210ENST00000551642 TMEM238C9JI98 176 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 Q6ZVH6 145 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 MIR7-3HGQ8N6C7 128 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 C14orf144Q96I85 54 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 SPANXDQ9BXN6 97 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 PPDPFQ9H3Y8 114 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 XAGE1AQ9HD64 81 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 SPANXCQ9NY87 97 aa3.97□□□□□ -1.77
DEPDC4-210ENST00000551642 IGLV9-49A0A0B4J1Y8 123 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 A0A1W2PNN7 141 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 SLC25A34Q6PIV7 304 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 DPH3Q96FX2 82 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 USH2AO75445 5202 aa3.96□□□□□ -1.78
DEPDC4-210ENST00000551642 FAM168BA1KXE4 195 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 IFITM1P13164 125 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 DAND5Q8N907 189 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00308Q8TCZ7 52 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 COPS9Q8WXC6 57 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 C12orf57Q99622 126 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 TP73-AS1Q9UF72 201 aa3.95□□□□□ -1.78
DEPDC4-210ENST00000551642 NDUFC2O95298 119 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 VPREB1P12018 145 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 C2orf91Q6ZV80 131 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 FAM19A5Q7Z5A7 132 aaPredicted RBP3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00518Q8N0U6 118 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 UQCR10Q9UDW1 63 aa3.94□□□□□ -1.78
DEPDC4-210ENST00000551642 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 M0QXV9 152 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 TAL2Q16559 108 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 Q8NDZ9 215 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
DEPDC4-210ENST00000551642 IGLV7-46A0A075B6I9 117 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 M0R378 163 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 NPC2P61916 151 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 LBHQ53QV2 105 aaPredicted RBP3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 MRPL55Q7Z7F7 128 aaKnown RBP3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 MUSTN1Q8IVN3 82 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 NKAPP1Q8N9T2 125 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
DEPDC4-210ENST00000551642 TSTD3H0UI37 97 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 PHF5AQ7RTV0 110 aaKnown RBP3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 LINC00167Q96N53 147 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 PRO1933Q9H354 126 aa3.91□□□□□ -1.78
DEPDC4-210ENST00000551642 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 IGKV2-28A0A075B6P5 120 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 NCR3O14931 201 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 IGKV2D-28P01615 120 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 PRR3P79522 188 aaKnown RBP3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 CEND1Q8N111 149 aa3.9□□□□□ -1.79
DEPDC4-210ENST00000551642 A4D1N5 150 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 HSD52Q0P140 79 aa3.89□□□□□ -1.79
DEPDC4-210ENST00000551642 TRBV10-3A0A0K0K1G6 114 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms