RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CLLU1Q5K131 121 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
PRPF40B-214ENST00000551320 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 ATP6V1G1O75348 118 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 SPRR1AP35321 89 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 LINC00483Q53H64 154 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 C9orf153Q5TBE3 101 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 Q75L30 129 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 COMMD7Q86VX2 200 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 FAM19A2Q8N3H0 131 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 PMCHL2Q9BQD1 86 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
PRPF40B-214ENST00000551320 IGLV8-61A0A075B6I0 122 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 TRAV9-1A0A075B6T8 112 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 SPINK1P00995 79 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 SEC11CQ9BY50 192 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 NDUFA12Q9UI09 145 aa3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
PRPF40B-214ENST00000551320 H7C2G1 150 aa3.72□□□□□ -1.81
PRPF40B-214ENST00000551320 DDTP30046 118 aa3.72□□□□□ -1.81
PRPF40B-214ENST00000551320 SNRPEP62304 92 aaKnown RBP3.71□□□□□ -1.82
PRPF40B-214ENST00000551320 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
PRPF40B-214ENST00000551320 IFI27L1Q96BM0 104 aa3.71□□□□□ -1.82
PRPF40B-214ENST00000551320 LINC01549A6NIU2 74 aa3.7□□□□□ -1.82
PRPF40B-214ENST00000551320 SLC25A20O43772 301 aa3.7□□□□□ -1.82
PRPF40B-214ENST00000551320 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
PRPF40B-214ENST00000551320 ADAMTSL4-AS1Q5T5F5 129 aa3.7□□□□□ -1.82
PRPF40B-214ENST00000551320 UQCC3Q6UW78 93 aa3.69□□□□□ -1.82
PRPF40B-214ENST00000551320 Q6ZRX8 168 aa3.69□□□□□ -1.82
PRPF40B-214ENST00000551320 SSBP3-AS1Q7Z2R9 100 aa3.69□□□□□ -1.82
PRPF40B-214ENST00000551320 TRAV12-1A0A0B4J245 112 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 APOC3P02656 99 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 FABP4P15090 132 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 CTAG1AP78358 180 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 S100A7L2Q5SY68 101 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 C10orf91Q5T1B1 145 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 DEFB105AQ8NG35 78 aa3.68□□□□□ -1.82
PRPF40B-214ENST00000551320 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 MYMXA0A1B0GTQ4 84 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 M0R2T5 61 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 LEPROTO15243 131 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 IGLV6-57P01721 117 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 RHEBQ15382 184 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 Q1RN00 199 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 COX19Q49B96 90 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 YPEL4Q96NS1 127 aa3.67□□□□□ -1.82
PRPF40B-214ENST00000551320 USH2AO75445 5202 aa3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 J3QQQ9 107 aa3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 ZNF73O43830 326 aaPredicted RBP3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 HERV-K104P63124 156 aa3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 SFTA2Q6UW10 78 aa3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 MAP1LC3CQ9BXW4 147 aa3.66□□□□□ -1.82
PRPF40B-214ENST00000551320 SERF1AO75920 110 aa3.65□□□□□ -1.83
PRPF40B-214ENST00000551320 OR13C6PQ8NH95 151 aa3.65□□□□□ -1.83
PRPF40B-214ENST00000551320 TTTY13Q9BZ97 58 aa3.65□□□□□ -1.83
PRPF40B-214ENST00000551320 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
PRPF40B-214ENST00000551320 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
PRPF40B-214ENST00000551320 HSBP1O75506 76 aa3.64□□□□□ -1.83
PRPF40B-214ENST00000551320 RPS29P62273 56 aaKnown RBP3.64□□□□□ -1.83
PRPF40B-214ENST00000551320 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
PRPF40B-214ENST00000551320 CHCHD1Q96BP2 118 aaKnown RBP3.64□□□□□ -1.83
PRPF40B-214ENST00000551320 LOC107984156A0A0G2JMH3 177 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 A0A0J9YXY3 114 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 TRBV10-2A0A0K0K1G8 114 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 TRGC2P03986 189 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 LGALS3P17931 250 aaKnown RBP3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 S100A12P80511 92 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 ARL17AQ8IVW1 177 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 MIEN1Q9BRT3 115 aa3.63□□□□□ -1.83
PRPF40B-214ENST00000551320 DPM2O94777 84 aa3.62□□□□□ -1.83
PRPF40B-214ENST00000551320 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
PRPF40B-214ENST00000551320 C1orf195Q5TG92 126 aa3.62□□□□□ -1.83
PRPF40B-214ENST00000551320 Q6Q795 121 aa3.62□□□□□ -1.83
PRPF40B-214ENST00000551320 LITAFQ99732 161 aa3.62□□□□□ -1.83
PRPF40B-214ENST00000551320 IGKCP01834 107 aa3.61□□□□□ -1.83
PRPF40B-214ENST00000551320 JOSD1Q15040 202 aaPredicted RBP3.61□□□□□ -1.83
PRPF40B-214ENST00000551320 TAL2Q16559 108 aa3.61□□□□□ -1.83
PRPF40B-214ENST00000551320 LINC00308Q8TCZ7 52 aa3.61□□□□□ -1.83
PRPF40B-214ENST00000551320 LINC00587B1AMM8 73 aa3.6□□□□□ -1.83
PRPF40B-214ENST00000551320 NDUFC2O95298 119 aa3.6□□□□□ -1.83
PRPF40B-214ENST00000551320 CFC1BP0CG36 223 aa3.6□□□□□ -1.83
PRPF40B-214ENST00000551320 C6orf99Q4VX62 202 aa3.6□□□□□ -1.83
PRPF40B-214ENST00000551320 SNAPINO95295 136 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 SPRR1BP22528 89 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 COX7BP24311 80 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 PLNP26678 52 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 HERVK_113P61574 105 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 RPL37P61927 97 aaKnown RBP3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 SVBPQ8N300 66 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 LIMD2Q9BT23 127 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
PRPF40B-214ENST00000551320 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.84
PRPF40B-214ENST00000551320 NMUP48645 174 aa3.57□□□□□ -1.84
PRPF40B-214ENST00000551320 HINT1P49773 126 aaPredicted RBP3.57□□□□□ -1.84
PRPF40B-214ENST00000551320 ELOF1P60002 83 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms