RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
DDX54-207ENST00000550016 PRR26Q8N8Z3 221 aa11.58□□□□□ -0.56
DDX54-207ENST00000550016 OR13C6PQ8NH95 151 aa11.58□□□□□ -0.56
DDX54-207ENST00000550016 VAMP8Q9BV40 100 aa11.58□□□□□ -0.56
DDX54-207ENST00000550016 TRAV23DV6A0A075B6W5 121 aa11.57□□□□□ -0.56
DDX54-207ENST00000550016 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
DDX54-207ENST00000550016 HIGD2AQ9BW72 106 aa11.57□□□□□ -0.56
DDX54-207ENST00000550016 PAM16Q9Y3D7 125 aa11.57□□□□□ -0.56
DDX54-207ENST00000550016 DLEU1O43261 78 aa11.56□□□□□ -0.56
DDX54-207ENST00000550016 B5MCH6 92 aa11.55□□□□□ -0.56
DDX54-207ENST00000550016 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
DDX54-207ENST00000550016 ZNF73O43830 326 aaPredicted RBP11.53□□□□□ -0.56
DDX54-207ENST00000550016 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
DDX54-207ENST00000550016 PYY3Q5JQD4 70 aa11.52□□□□□ -0.57
DDX54-207ENST00000550016 Q6ZRX8 168 aa11.51□□□□□ -0.57
DDX54-207ENST00000550016 SMCR5Q8TEV8 140 aa11.51□□□□□ -0.57
DDX54-207ENST00000550016 CRYGAP11844 174 aa11.5□□□□□ -0.57
DDX54-207ENST00000550016 HINT1P49773 126 aaPredicted RBP11.5□□□□□ -0.57
DDX54-207ENST00000550016 ANAPC11Q9NYG5 84 aa11.5□□□□□ -0.57
DDX54-207ENST00000550016 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
DDX54-207ENST00000550016 SLC25A34Q6PIV7 304 aa11.49□□□□□ -0.57
DDX54-207ENST00000550016 HIST1H4GQ99525 98 aa11.49□□□□□ -0.57
DDX54-207ENST00000550016 A0A087X002 238 aa11.48□□□□□ -0.57
DDX54-207ENST00000550016 A6NDN8 102 aa11.48□□□□□ -0.57
DDX54-207ENST00000550016 ZNF706Q9Y5V0 76 aaPredicted RBP11.48□□□□□ -0.57
DDX54-207ENST00000550016 TNXBP22105 4242 aa11.47□□□□□ -0.57
DDX54-207ENST00000550016 TRAV13-2A0A0B4J235 113 aa11.47□□□□□ -0.57
DDX54-207ENST00000550016 SPRR4Q96PI1 79 aa11.47□□□□□ -0.57
DDX54-207ENST00000550016 Q9BRP9 147 aa11.47□□□□□ -0.57
DDX54-207ENST00000550016 A4D1N5 150 aa11.46□□□□□ -0.57
DDX54-207ENST00000550016 HIGD1BQ9P298 99 aa11.46□□□□□ -0.57
DDX54-207ENST00000550016 HERC1Q15751 4861 aa11.46□□□□□ -0.58
DDX54-207ENST00000550016 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
DDX54-207ENST00000550016 C6orf99Q4VX62 202 aa11.43□□□□□ -0.58
DDX54-207ENST00000550016 TYMSOSQ8TAI1 123 aa11.43□□□□□ -0.58
DDX54-207ENST00000550016 KRTAP13-2Q52LG2 175 aa11.42□□□□□ -0.58
DDX54-207ENST00000550016 C2orf91Q6ZV80 131 aa11.42□□□□□ -0.58
DDX54-207ENST00000550016 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
DDX54-207ENST00000550016 COX7BP24311 80 aa11.41□□□□□ -0.58
DDX54-207ENST00000550016 ELOF1P60002 83 aaKnown RBP11.4□□□□□ -0.58
DDX54-207ENST00000550016 SMIM11BQ8TCY0 68 aa11.39□□□□□ -0.59
DDX54-207ENST00000550016 DHRS4-AS1Q9P1J3 65 aa11.39□□□□□ -0.59
DDX54-207ENST00000550016 LINC00483Q53H64 154 aa11.38□□□□□ -0.59
DDX54-207ENST00000550016 GAGE2AQ6NT46 116 aa11.38□□□□□ -0.59
DDX54-207ENST00000550016 TAL2Q16559 108 aa11.37□□□□□ -0.59
DDX54-207ENST00000550016 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
DDX54-207ENST00000550016 C3orf22Q8N5N4 141 aa11.35□□□□□ -0.59
DDX54-207ENST00000550016 C12orf57Q99622 126 aa11.35□□□□□ -0.59
DDX54-207ENST00000550016 CEND1Q8N111 149 aa11.33□□□□□ -0.6
DDX54-207ENST00000550016 ST20-AS1Q8NBB2 130 aa11.33□□□□□ -0.6
DDX54-207ENST00000550016 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
DDX54-207ENST00000550016 CFC1P0CG37 223 aa11.32□□□□□ -0.6
DDX54-207ENST00000550016 VAMP3Q15836 100 aa11.31□□□□□ -0.6
DDX54-207ENST00000550016 UQCR10Q9UDW1 63 aa11.31□□□□□ -0.6
DDX54-207ENST00000550016 LINC00304Q8N9R0 145 aa11.3□□□□□ -0.6
DDX54-207ENST00000550016 RAB37Q96AX2 223 aa11.29□□□□□ -0.6
DDX54-207ENST00000550016 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
DDX54-207ENST00000550016 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
DDX54-207ENST00000550016 A6NJY4 79 aa11.28□□□□□ -0.6
DDX54-207ENST00000550016 TSPAN13O95857 204 aa11.27□□□□□ -0.61
DDX54-207ENST00000550016 SPRR1BP22528 89 aa11.26□□□□□ -0.61
DDX54-207ENST00000550016 HSD52Q0P140 79 aa11.26□□□□□ -0.61
DDX54-207ENST00000550016 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
DDX54-207ENST00000550016 IGLV9-49A0A0B4J1Y8 123 aa11.25□□□□□ -0.61
DDX54-207ENST00000550016 H7C2G1 150 aa11.25□□□□□ -0.61
DDX54-207ENST00000550016 FXYD2P54710 66 aa11.25□□□□□ -0.61
DDX54-207ENST00000550016 SLC25A20O43772 301 aa11.24□□□□□ -0.61
DDX54-207ENST00000550016 SMIM6P0DI80 62 aa11.24□□□□□ -0.61
DDX54-207ENST00000550016 CTAG1AP78358 180 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 MOBPQ13875 183 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 LINC00575Q6W349 94 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 SSBP3-AS1Q7Z2R9 100 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 Q8NBF4 154 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 DEFB105AQ8NG35 78 aa11.23□□□□□ -0.61
DDX54-207ENST00000550016 BVES-AS1Q5T3Y7 98 aa11.22□□□□□ -0.61
DDX54-207ENST00000550016 SPAG11AQ6PDA7 123 aa11.22□□□□□ -0.61
DDX54-207ENST00000550016 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
DDX54-207ENST00000550016 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.61
DDX54-207ENST00000550016 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
DDX54-207ENST00000550016 PRO1933Q9H354 126 aa11.2□□□□□ -0.62
DDX54-207ENST00000550016 LAMTOR3Q9UHA4 124 aa11.2□□□□□ -0.62
DDX54-207ENST00000550016 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
DDX54-207ENST00000550016 LOC105371267A0A1B0GV96 52 aa11.19□□□□□ -0.62
DDX54-207ENST00000550016 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
DDX54-207ENST00000550016 hADV29S1A0JD25 119 aa11.18□□□□□ -0.62
DDX54-207ENST00000550016 LINC01547P58512 204 aaPredicted RBP11.18□□□□□ -0.62
DDX54-207ENST00000550016 Q1RN00 199 aa11.17□□□□□ -0.62
DDX54-207ENST00000550016 H0YGX0 51 aa11.14□□□□□ -0.63
DDX54-207ENST00000550016 SPINK1P00995 79 aa11.14□□□□□ -0.63
DDX54-207ENST00000550016 SMIM29Q86T20 159 aa11.14□□□□□ -0.63
DDX54-207ENST00000550016 Q8N377 158 aa11.14□□□□□ -0.63
DDX54-207ENST00000550016 PRR4Q16378 134 aa11.13□□□□□ -0.63
DDX54-207ENST00000550016 Q6ZQY7 126 aa11.13□□□□□ -0.63
DDX54-207ENST00000550016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.11□□□□□ -0.63
DDX54-207ENST00000550016 HMCN2Q8NDA2 5059 aa11.1□□□□□ -0.63
DDX54-207ENST00000550016 K7ERJ3 54 aa11.1□□□□□ -0.63
DDX54-207ENST00000550016 SNCGO76070 127 aa11.1□□□□□ -0.63
DDX54-207ENST00000550016 TRIAP1O43715 76 aa11.07□□□□□ -0.64
DDX54-207ENST00000550016 RPS29P62273 56 aaKnown RBP11.07□□□□□ -0.64
DDX54-207ENST00000550016 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms