RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
CHMP1A-206ENST00000549139 IGLV6-57P01721 117 aa9.33□□□□□ -0.92
CHMP1A-206ENST00000549139 RPL13AP40429 203 aaKnown RBP9.33□□□□□ -0.92
CHMP1A-206ENST00000549139 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
CHMP1A-206ENST00000549139 Q6ZVH6 145 aa9.32□□□□□ -0.92
CHMP1A-206ENST00000549139 A0A0U1RQV1 116 aa9.31□□□□□ -0.92
CHMP1A-206ENST00000549139 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
CHMP1A-206ENST00000549139 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
CHMP1A-206ENST00000549139 IFITM1P13164 125 aa9.3□□□□□ -0.92
CHMP1A-206ENST00000549139 LINC00518Q8N0U6 118 aa9.3□□□□□ -0.92
CHMP1A-206ENST00000549139 COPS9Q8WXC6 57 aa9.3□□□□□ -0.92
CHMP1A-206ENST00000549139 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
CHMP1A-206ENST00000549139 CRYGAP11844 174 aa9.29□□□□□ -0.92
CHMP1A-206ENST00000549139 CBY1Q9Y3M2 126 aa9.29□□□□□ -0.92
CHMP1A-206ENST00000549139 B5MCH6 92 aa9.28□□□□□ -0.92
CHMP1A-206ENST00000549139 FAM229BQ4G0N7 80 aa9.28□□□□□ -0.92
CHMP1A-206ENST00000549139 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.93
CHMP1A-206ENST00000549139 A0A087X002 238 aa9.27□□□□□ -0.93
CHMP1A-206ENST00000549139 ANAPC11Q9NYG5 84 aa9.27□□□□□ -0.93
CHMP1A-206ENST00000549139 MUSTN1Q8IVN3 82 aa9.26□□□□□ -0.93
CHMP1A-206ENST00000549139 OR13C6PQ8NH95 151 aa9.26□□□□□ -0.93
CHMP1A-206ENST00000549139 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
CHMP1A-206ENST00000549139 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
CHMP1A-206ENST00000549139 Q6ZRX8 168 aa9.24□□□□□ -0.93
CHMP1A-206ENST00000549139 TYMSOSQ8TAI1 123 aa9.24□□□□□ -0.93
CHMP1A-206ENST00000549139 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
CHMP1A-206ENST00000549139 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
CHMP1A-206ENST00000549139 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
CHMP1A-206ENST00000549139 JOSD1Q15040 202 aaPredicted RBP9.23□□□□□ -0.93
CHMP1A-206ENST00000549139 PRR4Q16378 134 aa9.23□□□□□ -0.93
CHMP1A-206ENST00000549139 COX8AP10176 69 aa9.22□□□□□ -0.93
CHMP1A-206ENST00000549139 KRTAP13-2Q52LG2 175 aa9.22□□□□□ -0.93
CHMP1A-206ENST00000549139 Q9BRP9 147 aa9.21□□□□□ -0.94
CHMP1A-206ENST00000549139 DLEU1O43261 78 aa9.2□□□□□ -0.94
CHMP1A-206ENST00000549139 ERC2-IT1O76042 136 aa9.19□□□□□ -0.94
CHMP1A-206ENST00000549139 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
CHMP1A-206ENST00000549139 A6NDN8 102 aa9.17□□□□□ -0.94
CHMP1A-206ENST00000549139 SPATA45Q537H7 98 aa9.17□□□□□ -0.94
CHMP1A-206ENST00000549139 PAM16Q9Y3D7 125 aa9.17□□□□□ -0.94
CHMP1A-206ENST00000549139 C6orf99Q4VX62 202 aa9.16□□□□□ -0.94
CHMP1A-206ENST00000549139 LINC00483Q53H64 154 aa9.16□□□□□ -0.94
CHMP1A-206ENST00000549139 VAMP8Q9BV40 100 aa9.16□□□□□ -0.94
CHMP1A-206ENST00000549139 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
CHMP1A-206ENST00000549139 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.94
CHMP1A-206ENST00000549139 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
CHMP1A-206ENST00000549139 C14orf144Q96I85 54 aa9.15□□□□□ -0.94
CHMP1A-206ENST00000549139 TMA7Q9Y2S6 64 aaKnown RBP9.15□□□□□ -0.94
CHMP1A-206ENST00000549139 A4D1N5 150 aa9.14□□□□□ -0.95
CHMP1A-206ENST00000549139 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
CHMP1A-206ENST00000549139 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
CHMP1A-206ENST00000549139 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
CHMP1A-206ENST00000549139 COX7BP24311 80 aa9.13□□□□□ -0.95
CHMP1A-206ENST00000549139 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
CHMP1A-206ENST00000549139 CTAG1AP78358 180 aa9.12□□□□□ -0.95
CHMP1A-206ENST00000549139 PYY3Q5JQD4 70 aa9.12□□□□□ -0.95
CHMP1A-206ENST00000549139 LINC00304Q8N9R0 145 aa9.12□□□□□ -0.95
CHMP1A-206ENST00000549139 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
CHMP1A-206ENST00000549139 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
CHMP1A-206ENST00000549139 TSPAN13O95857 204 aa9.11□□□□□ -0.95
CHMP1A-206ENST00000549139 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
CHMP1A-206ENST00000549139 SMIM11BQ8TCY0 68 aa9.1□□□□□ -0.95
CHMP1A-206ENST00000549139 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
CHMP1A-206ENST00000549139 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
CHMP1A-206ENST00000549139 SPRR1BP22528 89 aa9.07□□□□□ -0.96
CHMP1A-206ENST00000549139 C2orf91Q6ZV80 131 aa9.07□□□□□ -0.96
CHMP1A-206ENST00000549139 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
CHMP1A-206ENST00000549139 IGLV9-49A0A0B4J1Y8 123 aa9.05□□□□□ -0.96
CHMP1A-206ENST00000549139 TAL2Q16559 108 aa9.05□□□□□ -0.96
CHMP1A-206ENST00000549139 Q8NBF4 154 aa9.05□□□□□ -0.96
CHMP1A-206ENST00000549139 FSIP2Q5CZC0 6907 aa9.04□□□□□ -0.96
CHMP1A-206ENST00000549139 VAMP3Q15836 100 aa9.04□□□□□ -0.96
CHMP1A-206ENST00000549139 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
CHMP1A-206ENST00000549139 MOBPQ13875 183 aa9.03□□□□□ -0.96
CHMP1A-206ENST00000549139 C12orf57Q99622 126 aa9.03□□□□□ -0.96
CHMP1A-206ENST00000549139 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
CHMP1A-206ENST00000549139 CFC1BP0CG36 223 aa9.02□□□□□ -0.97
CHMP1A-206ENST00000549139 CFC1P0CG37 223 aa9.02□□□□□ -0.97
CHMP1A-206ENST00000549139 CEND1Q8N111 149 aa9.01□□□□□ -0.97
CHMP1A-206ENST00000549139 TEX49A0A1B0GTD5 131 aa9□□□□□ -0.97
CHMP1A-206ENST00000549139 SPINK1P00995 79 aa9□□□□□ -0.97
CHMP1A-206ENST00000549139 LAMTOR3Q9UHA4 124 aa9□□□□□ -0.97
CHMP1A-206ENST00000549139 A0A0B4J2C4 111 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 SLC25A20O43772 301 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 C9orf153Q5TBE3 101 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 RAB37Q96AX2 223 aa8.99□□□□□ -0.97
CHMP1A-206ENST00000549139 IGLV5-48A0A075B6I7 105 aa8.98□□□□□ -0.97
CHMP1A-206ENST00000549139 LINC01547P58512 204 aaPredicted RBP8.98□□□□□ -0.97
CHMP1A-206ENST00000549139 BVES-AS1Q5T3Y7 98 aa8.98□□□□□ -0.97
CHMP1A-206ENST00000549139 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
CHMP1A-206ENST00000549139 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
CHMP1A-206ENST00000549139 A6NJY4 79 aa8.97□□□□□ -0.97
CHMP1A-206ENST00000549139 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
CHMP1A-206ENST00000549139 UQCR10Q9UDW1 63 aa8.96□□□□□ -0.98
CHMP1A-206ENST00000549139 hADV29S1A0JD25 119 aa8.95□□□□□ -0.98
CHMP1A-206ENST00000549139 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
CHMP1A-206ENST00000549139 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
CHMP1A-206ENST00000549139 FXYD2P54710 66 aa8.94□□□□□ -0.98
CHMP1A-206ENST00000549139 HSD52Q0P140 79 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms