RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 Q8IZM0 81 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 GAGE2DQ9UEU5 116 aa9.87□□□□□ -0.83
SSH1-208ENST00000548522 IGLV1-50A0A075B6I6 118 aa9.86□□□□□ -0.83
SSH1-208ENST00000548522 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
SSH1-208ENST00000548522 M0QXV9 152 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 PRSS2P07478 247 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 NAA38Q9BRA0 125 aaKnown RBP9.84□□□□□ -0.83
SSH1-208ENST00000548522 KRTAP9-2Q9BYQ4 174 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 ERG28Q9UKR5 140 aa9.84□□□□□ -0.83
SSH1-208ENST00000548522 F8W1H4 67 aa9.83□□□□□ -0.84
SSH1-208ENST00000548522 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
SSH1-208ENST00000548522 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
SSH1-208ENST00000548522 UBE2BP63146 152 aa9.82□□□□□ -0.84
SSH1-208ENST00000548522 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
SSH1-208ENST00000548522 KIAA0087Q14695 138 aa9.81□□□□□ -0.84
SSH1-208ENST00000548522 F8WDY8 70 aa9.8□□□□□ -0.84
SSH1-208ENST00000548522 C9orf129Q5T035 196 aaKnown RBP9.8□□□□□ -0.84
SSH1-208ENST00000548522 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
SSH1-208ENST00000548522 LOC107984156A0A0G2JMH3 177 aa9.79□□□□□ -0.84
SSH1-208ENST00000548522 COX17Q14061 63 aa9.79□□□□□ -0.84
SSH1-208ENST00000548522 ARL17AQ8IVW1 177 aa9.79□□□□□ -0.84
SSH1-208ENST00000548522 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
SSH1-208ENST00000548522 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
SSH1-208ENST00000548522 RPL13AP40429 203 aaKnown RBP9.77□□□□□ -0.85
SSH1-208ENST00000548522 COX6CP09669 75 aa9.76□□□□□ -0.85
SSH1-208ENST00000548522 SOSTDC1Q6X4U4 206 aa9.76□□□□□ -0.85
SSH1-208ENST00000548522 PRO0461Q9UI25 63 aa9.76□□□□□ -0.85
SSH1-208ENST00000548522 TRAV13-2A0A0B4J235 113 aa9.75□□□□□ -0.85
SSH1-208ENST00000548522 NDUFC2-KCTD14E9PQ53 114 aa9.75□□□□□ -0.85
SSH1-208ENST00000548522 H3BMG7 143 aa9.75□□□□□ -0.85
SSH1-208ENST00000548522 K7ERU9 68 aa9.74□□□□□ -0.85
SSH1-208ENST00000548522 MIR7-3HGQ8N6C7 128 aa9.74□□□□□ -0.85
SSH1-208ENST00000548522 MUC17Q685J3 4493 aa9.74□□□□□ -0.85
SSH1-208ENST00000548522 A0A087X002 238 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 ZNF861PO60384 105 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 PSMB2P49721 201 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 CKS1BP61024 79 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 Q1RN00 199 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 OCIAD2Q56VL3 154 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 DAND5Q8N907 189 aa9.73□□□□□ -0.85
SSH1-208ENST00000548522 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
SSH1-208ENST00000548522 TCL1BO95988 128 aa9.72□□□□□ -0.85
SSH1-208ENST00000548522 LINC00158P58513 81 aa9.72□□□□□ -0.85
SSH1-208ENST00000548522 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
SSH1-208ENST00000548522 TRIAP1O43715 76 aa9.71□□□□□ -0.86
SSH1-208ENST00000548522 NDUFC2O95298 119 aa9.7□□□□□ -0.86
SSH1-208ENST00000548522 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
SSH1-208ENST00000548522 XAGE1AQ9HD64 81 aa9.7□□□□□ -0.86
SSH1-208ENST00000548522 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
SSH1-208ENST00000548522 NPC2P61916 151 aa9.69□□□□□ -0.86
SSH1-208ENST00000548522 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
SSH1-208ENST00000548522 J3QR89 54 aa9.67□□□□□ -0.86
SSH1-208ENST00000548522 LST1O00453 97 aa9.67□□□□□ -0.86
SSH1-208ENST00000548522 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
SSH1-208ENST00000548522 H7C2G1 150 aa9.66□□□□□ -0.86
SSH1-208ENST00000548522 ANAPC11Q9NYG5 84 aa9.66□□□□□ -0.86
SSH1-208ENST00000548522 IGKV2-28A0A075B6P5 120 aa9.65□□□□□ -0.86
SSH1-208ENST00000548522 H3BT86 120 aa9.65□□□□□ -0.86
SSH1-208ENST00000548522 IGKV2D-28P01615 120 aa9.65□□□□□ -0.86
SSH1-208ENST00000548522 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
SSH1-208ENST00000548522 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
SSH1-208ENST00000548522 PFN2P35080 140 aa9.64□□□□□ -0.87
SSH1-208ENST00000548522 SMCPP49901 116 aaPredicted RBP9.64□□□□□ -0.87
SSH1-208ENST00000548522 SLC25A20O43772 301 aa9.63□□□□□ -0.87
SSH1-208ENST00000548522 TEN1Q86WV5 123 aa9.63□□□□□ -0.87
SSH1-208ENST00000548522 TYMSOSQ8TAI1 123 aa9.63□□□□□ -0.87
SSH1-208ENST00000548522 BCE1O60756 84 aa9.62□□□□□ -0.87
SSH1-208ENST00000548522 TRACP01848 142 aa9.62□□□□□ -0.87
SSH1-208ENST00000548522 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
SSH1-208ENST00000548522 LINC00337Q8N6G1 96 aa9.62□□□□□ -0.87
SSH1-208ENST00000548522 KRTAP9-6A0A140TA67 174 aa9.61□□□□□ -0.87
SSH1-208ENST00000548522 H0YGX0 51 aa9.61□□□□□ -0.87
SSH1-208ENST00000548522 CRYGAP11844 174 aa9.61□□□□□ -0.87
SSH1-208ENST00000548522 ETDBQ3ZM63 59 aa9.61□□□□□ -0.87
SSH1-208ENST00000548522 KRTAP13-2Q52LG2 175 aa9.61□□□□□ -0.87
SSH1-208ENST00000548522 RPL37AP8A6NKH3 93 aa9.6□□□□□ -0.87
SSH1-208ENST00000548522 C9JAW5 83 aa9.6□□□□□ -0.87
SSH1-208ENST00000548522 ANKRD29Q8N6D5 301 aa9.6□□□□□ -0.87
SSH1-208ENST00000548522 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
SSH1-208ENST00000548522 A0A1B0GX51 115 aa9.58□□□□□ -0.88
SSH1-208ENST00000548522 LINC00167Q96N53 147 aa9.58□□□□□ -0.88
SSH1-208ENST00000548522 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
SSH1-208ENST00000548522 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
SSH1-208ENST00000548522 SMIM11BQ8TCY0 68 aa9.56□□□□□ -0.88
SSH1-208ENST00000548522 CBY1Q9Y3M2 126 aa9.55□□□□□ -0.88
SSH1-208ENST00000548522 MTURNQ8N3F0 131 aa9.54□□□□□ -0.88
SSH1-208ENST00000548522 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
SSH1-208ENST00000548522 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
SSH1-208ENST00000548522 CDIP1Q9H305 208 aa9.52□□□□□ -0.89
SSH1-208ENST00000548522 UBE2AP49459 152 aa9.51□□□□□ -0.89
SSH1-208ENST00000548522 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
SSH1-208ENST00000548522 VPS25Q9BRG1 176 aa9.51□□□□□ -0.89
SSH1-208ENST00000548522 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
SSH1-208ENST00000548522 OR13C6PQ8NH95 151 aa9.5□□□□□ -0.89
SSH1-208ENST00000548522 IGLV7-46A0A075B6I9 117 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms