RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
RBFOX1-207ENST00000547338 A0A087WTM6 91 aa11.25□□□□□ -0.61
RBFOX1-207ENST00000547338 JMJD7-PLA2G4BH0Y9G9 81 aa11.25□□□□□ -0.61
RBFOX1-207ENST00000547338 NCR3O14931 201 aa11.25□□□□□ -0.61
RBFOX1-207ENST00000547338 LINC00575Q6W349 94 aa11.25□□□□□ -0.61
RBFOX1-207ENST00000547338 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
RBFOX1-207ENST00000547338 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
RBFOX1-207ENST00000547338 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 M0R378 163 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 TLX1NBP0CAT3 122 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 SYCNQ0VAF6 134 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 C21orf62-AS1Q17RA5 79 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 Q6ZRU5 148 aa11.23□□□□□ -0.61
RBFOX1-207ENST00000547338 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
RBFOX1-207ENST00000547338 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
RBFOX1-207ENST00000547338 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
RBFOX1-207ENST00000547338 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
RBFOX1-207ENST00000547338 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
RBFOX1-207ENST00000547338 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
RBFOX1-207ENST00000547338 Q8NDZ9 215 aa11.21□□□□□ -0.61
RBFOX1-207ENST00000547338 IMUPQ9GZP8 106 aa11.21□□□□□ -0.61
RBFOX1-207ENST00000547338 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
RBFOX1-207ENST00000547338 hADV29S1A0JD25 119 aa11.2□□□□□ -0.62
RBFOX1-207ENST00000547338 VPREB1P12018 145 aa11.2□□□□□ -0.62
RBFOX1-207ENST00000547338 RPL18AQ02543 176 aaKnown RBP11.2□□□□□ -0.62
RBFOX1-207ENST00000547338 LINC00643Q86TS7 51 aa11.2□□□□□ -0.62
RBFOX1-207ENST00000547338 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
RBFOX1-207ENST00000547338 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
RBFOX1-207ENST00000547338 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
RBFOX1-207ENST00000547338 PLA2G2DQ9UNK4 145 aa11.19□□□□□ -0.62
RBFOX1-207ENST00000547338 A0A1B0GV72 72 aa11.18□□□□□ -0.62
RBFOX1-207ENST00000547338 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
RBFOX1-207ENST00000547338 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
RBFOX1-207ENST00000547338 TRBV10-3A0A0K0K1G6 114 aa11.16□□□□□ -0.62
RBFOX1-207ENST00000547338 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
RBFOX1-207ENST00000547338 KRTAP10-1P60331 282 aa11.15□□□□□ -0.62
RBFOX1-207ENST00000547338 SLPIP03973 132 aa11.14□□□□□ -0.63
RBFOX1-207ENST00000547338 COX7BP24311 80 aa11.14□□□□□ -0.63
RBFOX1-207ENST00000547338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
RBFOX1-207ENST00000547338 PSCAO43653 123 aa11.14□□□□□ -0.63
RBFOX1-207ENST00000547338 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
RBFOX1-207ENST00000547338 CCKP06307 115 aa11.13□□□□□ -0.63
RBFOX1-207ENST00000547338 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
RBFOX1-207ENST00000547338 PDE6GP18545 87 aa11.12□□□□□ -0.63
RBFOX1-207ENST00000547338 Q6ZRP5 223 aa11.12□□□□□ -0.63
RBFOX1-207ENST00000547338 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
RBFOX1-207ENST00000547338 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
RBFOX1-207ENST00000547338 USP17L23D6RBM5 183 aa11.1□□□□□ -0.63
RBFOX1-207ENST00000547338 DNAH8Q96JB1 4490 aa11.1□□□□□ -0.63
RBFOX1-207ENST00000547338 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
RBFOX1-207ENST00000547338 KCNQ1DNQ9H478 68 aa11.09□□□□□ -0.63
RBFOX1-207ENST00000547338 FAT1Q14517 4588 aa11.08□□□□□ -0.64
RBFOX1-207ENST00000547338 RBM3P98179 157 aaKnown RBP11.07□□□□□ -0.64
RBFOX1-207ENST00000547338 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
RBFOX1-207ENST00000547338 LOC110117498A0A087WWA1 95 aa11.06□□□□□ -0.64
RBFOX1-207ENST00000547338 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
RBFOX1-207ENST00000547338 Q8N1X5 172 aa11.06□□□□□ -0.64
RBFOX1-207ENST00000547338 LOC107984640A0A0U1RRK4 108 aa11.05□□□□□ -0.64
RBFOX1-207ENST00000547338 NDUFV3P56181 108 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 C14orf177Q52M58 125 aa11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 Q6JHZ5 121 aa11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 Q6ZQY7 126 aa11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
RBFOX1-207ENST00000547338 ANAPC13Q9BS18 74 aa11.03□□□□□ -0.64
RBFOX1-207ENST00000547338 FAM30AQ9NZY2 134 aa11.03□□□□□ -0.64
RBFOX1-207ENST00000547338 LAMTOR3Q9UHA4 124 aa11.03□□□□□ -0.64
RBFOX1-207ENST00000547338 PRYO14603 147 aa11.02□□□□□ -0.65
RBFOX1-207ENST00000547338 PKIGQ9Y2B9 76 aa11.02□□□□□ -0.65
RBFOX1-207ENST00000547338 HAMPP81172 84 aa11.01□□□□□ -0.65
RBFOX1-207ENST00000547338 ATP5EP2Q5VTU8 51 aa11.01□□□□□ -0.65
RBFOX1-207ENST00000547338 DSCR8Q96T75 97 aa11.01□□□□□ -0.65
RBFOX1-207ENST00000547338 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
RBFOX1-207ENST00000547338 CNBPP62633 177 aaKnown RBP10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 DHRS4-AS1Q9P1J3 65 aa10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 Q6ZQT0 140 aa10.99□□□□□ -0.65
RBFOX1-207ENST00000547338 Q6ZSA8 131 aa10.98□□□□□ -0.65
RBFOX1-207ENST00000547338 SRRM2Q9UQ35 2752 aaKnown RBP10.97□□□□□ -0.65
RBFOX1-207ENST00000547338 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
RBFOX1-207ENST00000547338 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
RBFOX1-207ENST00000547338 UBL5Q9BZL1 73 aa10.96□□□□□ -0.65
RBFOX1-207ENST00000547338 SPRR1AP35321 89 aa10.95□□□□□ -0.66
RBFOX1-207ENST00000547338 SMR3BP02814 79 aaPredicted RBP10.94□□□□□ -0.66
RBFOX1-207ENST00000547338 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
RBFOX1-207ENST00000547338 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
RBFOX1-207ENST00000547338 KRTAP4-16G5E9R7 235 aaPredicted RBP10.91□□□□□ -0.66
RBFOX1-207ENST00000547338 ETDCA0A1B0GVM5 59 aa10.9□□□□□ -0.66
RBFOX1-207ENST00000547338 A0A1B0GW54 56 aa10.9□□□□□ -0.66
RBFOX1-207ENST00000547338 EPM2AB3EWF7 344 aa10.9□□□□□ -0.66
RBFOX1-207ENST00000547338 Q5VSD8 79 aa10.9□□□□□ -0.66
RBFOX1-207ENST00000547338 Q6ZRX8 168 aa10.9□□□□□ -0.66
RBFOX1-207ENST00000547338 B5MCH6 92 aa10.89□□□□□ -0.67
RBFOX1-207ENST00000547338 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
RBFOX1-207ENST00000547338 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
RBFOX1-207ENST00000547338 HIST1H4AP62805 103 aaKnown RBP10.87□□□□□ -0.67
RBFOX1-207ENST00000547338 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
RBFOX1-207ENST00000547338 ATOX1O00244 68 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms