RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 HIGD1BQ9P298 99 aa12.56□□□□□ -0.4
SCARB1-211ENST00000546215 OR13C6PQ8NH95 151 aa12.55□□□□□ -0.4
SCARB1-211ENST00000546215 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
SCARB1-211ENST00000546215 TRAV23DV6A0A075B6W5 121 aa12.53□□□□□ -0.4
SCARB1-211ENST00000546215 TNXBP22105 4242 aa12.52□□□□□ -0.4
SCARB1-211ENST00000546215 ETDCA0A1B0GVM5 59 aa12.51□□□□□ -0.41
SCARB1-211ENST00000546215 A4D1N5 150 aa12.51□□□□□ -0.41
SCARB1-211ENST00000546215 LINC01600Q96MT4 127 aa12.51□□□□□ -0.41
SCARB1-211ENST00000546215 LOC105371267A0A1B0GV96 52 aa12.5□□□□□ -0.41
SCARB1-211ENST00000546215 ZNF73O43830 326 aaPredicted RBP12.5□□□□□ -0.41
SCARB1-211ENST00000546215 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
SCARB1-211ENST00000546215 KRTAP1-4P0C5Y4 121 aa12.49□□□□□ -0.41
SCARB1-211ENST00000546215 DMBT1Q9UGM3 2413 aaPredicted RBP12.48□□□□□ -0.41
SCARB1-211ENST00000546215 B5MCH6 92 aa12.48□□□□□ -0.41
SCARB1-211ENST00000546215 TRAV13-2A0A0B4J235 113 aa12.47□□□□□ -0.41
SCARB1-211ENST00000546215 A6NDN8 102 aa12.47□□□□□ -0.41
SCARB1-211ENST00000546215 J3QL48 77 aa12.47□□□□□ -0.41
SCARB1-211ENST00000546215 MT1HL1P0DM35 61 aa12.47□□□□□ -0.41
SCARB1-211ENST00000546215 HIGD2AQ9BW72 106 aa12.47□□□□□ -0.41
SCARB1-211ENST00000546215 SMIM6P0DI80 62 aa12.46□□□□□ -0.42
SCARB1-211ENST00000546215 Q6ZRX8 168 aa12.45□□□□□ -0.42
SCARB1-211ENST00000546215 TAL2Q16559 108 aa12.44□□□□□ -0.42
SCARB1-211ENST00000546215 UQCR10Q9UDW1 63 aa12.44□□□□□ -0.42
SCARB1-211ENST00000546215 SMCR5Q8TEV8 140 aa12.43□□□□□ -0.42
SCARB1-211ENST00000546215 HERC1Q15751 4861 aa12.42□□□□□ -0.42
SCARB1-211ENST00000546215 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SCARB1-211ENST00000546215 Q9BRP9 147 aa12.42□□□□□ -0.42
SCARB1-211ENST00000546215 HINT1P49773 126 aaPredicted RBP12.41□□□□□ -0.42
SCARB1-211ENST00000546215 KRTAP10-8P60410 259 aa12.41□□□□□ -0.42
SCARB1-211ENST00000546215 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
SCARB1-211ENST00000546215 CEND1Q8N111 149 aa12.41□□□□□ -0.42
SCARB1-211ENST00000546215 CFC1BP0CG36 223 aa12.39□□□□□ -0.43
SCARB1-211ENST00000546215 CFC1P0CG37 223 aa12.39□□□□□ -0.43
SCARB1-211ENST00000546215 PRR26Q8N8Z3 221 aa12.39□□□□□ -0.43
SCARB1-211ENST00000546215 SMIM11BQ8TCY0 68 aa12.39□□□□□ -0.43
SCARB1-211ENST00000546215 ERC2-IT1O76042 136 aa12.38□□□□□ -0.43
SCARB1-211ENST00000546215 ANAPC11Q9NYG5 84 aa12.38□□□□□ -0.43
SCARB1-211ENST00000546215 PRO1933Q9H354 126 aa12.37□□□□□ -0.43
SCARB1-211ENST00000546215 TRBV7-6A0A0J9YX20 115 aa12.36□□□□□ -0.43
SCARB1-211ENST00000546215 ELOF1P60002 83 aaKnown RBP12.36□□□□□ -0.43
SCARB1-211ENST00000546215 HSD52Q0P140 79 aa12.36□□□□□ -0.43
SCARB1-211ENST00000546215 COX7BP24311 80 aa12.35□□□□□ -0.43
SCARB1-211ENST00000546215 FXYD2P54710 66 aa12.35□□□□□ -0.43
SCARB1-211ENST00000546215 SPRR4Q96PI1 79 aa12.35□□□□□ -0.43
SCARB1-211ENST00000546215 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
SCARB1-211ENST00000546215 A0A087X002 238 aa12.34□□□□□ -0.43
SCARB1-211ENST00000546215 A0A0B4J2C4 111 aa12.34□□□□□ -0.43
SCARB1-211ENST00000546215 TMEM238LA0A1B0GVL6 79 aa12.33□□□□□ -0.44
SCARB1-211ENST00000546215 A6NJY4 79 aa12.33□□□□□ -0.44
SCARB1-211ENST00000546215 ZNF706Q9Y5V0 76 aaPredicted RBP12.33□□□□□ -0.44
SCARB1-211ENST00000546215 FAM229BQ4G0N7 80 aa12.32□□□□□ -0.44
SCARB1-211ENST00000546215 A0A1B0GWB2 263 aa12.31□□□□□ -0.44
SCARB1-211ENST00000546215 RAB37Q96AX2 223 aa12.31□□□□□ -0.44
SCARB1-211ENST00000546215 DHRS4-AS1Q9P1J3 65 aa12.31□□□□□ -0.44
SCARB1-211ENST00000546215 CRYGAP11844 174 aa12.3□□□□□ -0.44
SCARB1-211ENST00000546215 KRTAP13-2Q52LG2 175 aa12.28□□□□□ -0.44
SCARB1-211ENST00000546215 LINC00483Q53H64 154 aa12.27□□□□□ -0.44
SCARB1-211ENST00000546215 H7C2G1 150 aa12.26□□□□□ -0.45
SCARB1-211ENST00000546215 GAGE2AQ6NT46 116 aa12.26□□□□□ -0.45
SCARB1-211ENST00000546215 VAMP3Q15836 100 aa12.26□□□□□ -0.45
SCARB1-211ENST00000546215 ST20-AS1Q8NBB2 130 aa12.26□□□□□ -0.45
SCARB1-211ENST00000546215 PRO1854Q9UHT4 67 aa12.26□□□□□ -0.45
SCARB1-211ENST00000546215 NHP2Q9NX24 153 aaKnown RBP12.24□□□□□ -0.45
SCARB1-211ENST00000546215 BVES-AS1Q5T3Y7 98 aa12.23□□□□□ -0.45
SCARB1-211ENST00000546215 TYMSOSQ8TAI1 123 aa12.22□□□□□ -0.45
SCARB1-211ENST00000546215 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
SCARB1-211ENST00000546215 CTAG1AP78358 180 aa12.22□□□□□ -0.45
SCARB1-211ENST00000546215 LINC00575Q6W349 94 aa12.21□□□□□ -0.46
SCARB1-211ENST00000546215 C3orf22Q8N5N4 141 aa12.21□□□□□ -0.46
SCARB1-211ENST00000546215 K7ERJ3 54 aa12.2□□□□□ -0.46
SCARB1-211ENST00000546215 Q1RN00 199 aa12.18□□□□□ -0.46
SCARB1-211ENST00000546215 SPRR1BP22528 89 aa12.18□□□□□ -0.46
SCARB1-211ENST00000546215 SLC25A20O43772 301 aa12.17□□□□□ -0.46
SCARB1-211ENST00000546215 hADV29S1A0JD25 119 aa12.14□□□□□ -0.47
SCARB1-211ENST00000546215 LINC01547P58512 204 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-211ENST00000546215 DEFB105AQ8NG35 78 aa12.13□□□□□ -0.47
SCARB1-211ENST00000546215 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
SCARB1-211ENST00000546215 H0YGX0 51 aa12.13□□□□□ -0.47
SCARB1-211ENST00000546215 M0R143 59 aa12.13□□□□□ -0.47
SCARB1-211ENST00000546215 IGLV9-49A0A0B4J1Y8 123 aa12.12□□□□□ -0.47
SCARB1-211ENST00000546215 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
SCARB1-211ENST00000546215 TRIAP1O43715 76 aa12.12□□□□□ -0.47
SCARB1-211ENST00000546215 TSPAN13O95857 204 aa12.1□□□□□ -0.47
SCARB1-211ENST00000546215 MOBPQ13875 183 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 LINC00304Q8N9R0 145 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 FAM218AQ96MZ4 157 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 HMCN2Q8NDA2 5059 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 Q6ZQY7 126 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 Q8N377 158 aa12.09□□□□□ -0.47
SCARB1-211ENST00000546215 SSBP3-AS1Q7Z2R9 100 aa12.07□□□□□ -0.48
SCARB1-211ENST00000546215 SMIM29Q86T20 159 aa12.07□□□□□ -0.48
SCARB1-211ENST00000546215 PSMB2P49721 201 aa12.06□□□□□ -0.48
SCARB1-211ENST00000546215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.06□□□□□ -0.48
SCARB1-211ENST00000546215 Q8NBF4 154 aa12.06□□□□□ -0.48
SCARB1-211ENST00000546215 LAMTOR3Q9UHA4 124 aa12.06□□□□□ -0.48
SCARB1-211ENST00000546215 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
SCARB1-211ENST00000546215 A0A1B0GX51 115 aa12.02□□□□□ -0.49
SCARB1-211ENST00000546215 SNCGO76070 127 aa12.02□□□□□ -0.49
SCARB1-211ENST00000546215 COX6CP09669 75 aa12.01□□□□□ -0.49
SCARB1-211ENST00000546215 CLEC2BQ92478 149 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms