RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
CLSTN3-212ENST00000541770 LINC00308Q8TCZ7 52 aa5.29□□□□□ -1.56
CLSTN3-212ENST00000541770 COPS9Q8WXC6 57 aa5.29□□□□□ -1.56
CLSTN3-212ENST00000541770 A0A0U1RQV1 116 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 GAGE10A6NGK3 116 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 RPL37AP8A6NKH3 93 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 EIF4EBP3O60516 100 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 IGLV7-43P04211 117 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 IFITM1P13164 125 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 HIST1H4GQ99525 98 aa5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 SPANXB1Q9NS25 103 aaPredicted RBP5.28□□□□□ -1.56
CLSTN3-212ENST00000541770 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 NCR3O14931 201 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 BCE1O60756 84 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 HINT1P49773 126 aaPredicted RBP5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 NPC2P61916 151 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 HSD52Q0P140 79 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 TAL2Q16559 108 aa5.27□□□□□ -1.57
CLSTN3-212ENST00000541770 LCE2BO14633 110 aa5.26□□□□□ -1.57
CLSTN3-212ENST00000541770 PRR4Q16378 134 aa5.26□□□□□ -1.57
CLSTN3-212ENST00000541770 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
CLSTN3-212ENST00000541770 KCNQ1DNQ9H478 68 aa5.26□□□□□ -1.57
CLSTN3-212ENST00000541770 PRYO14603 147 aa5.25□□□□□ -1.57
CLSTN3-212ENST00000541770 ZNF861PO60384 105 aa5.25□□□□□ -1.57
CLSTN3-212ENST00000541770 TMEM126AQ9H061 195 aa5.25□□□□□ -1.57
CLSTN3-212ENST00000541770 TRBV10-3A0A0K0K1G6 114 aa5.24□□□□□ -1.57
CLSTN3-212ENST00000541770 IGLV6-57P01721 117 aa5.24□□□□□ -1.57
CLSTN3-212ENST00000541770 SPRR1AP35321 89 aa5.24□□□□□ -1.57
CLSTN3-212ENST00000541770 MUSTN1Q8IVN3 82 aa5.24□□□□□ -1.57
CLSTN3-212ENST00000541770 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
CLSTN3-212ENST00000541770 RPL28P46779 137 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 COL5A1-AS1Q5SY13 56 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 S100A7L2Q5SY68 101 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 BVES-AS1Q5T3Y7 98 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 CEND1Q8N111 149 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 DIRC1Q969H9 104 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 CBY1Q9Y3M2 126 aa5.23□□□□□ -1.57
CLSTN3-212ENST00000541770 A6NDN8 102 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 H0Y9J4 135 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 UBE2AP49459 152 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 FXYD2P54710 66 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 LINC00337Q8N6G1 96 aa5.22□□□□□ -1.57
CLSTN3-212ENST00000541770 TMEM238LA0A1B0GVL6 79 aa5.21□□□□□ -1.58
CLSTN3-212ENST00000541770 KRTAP4-16G5E9R7 235 aaPredicted RBP5.21□□□□□ -1.58
CLSTN3-212ENST00000541770 K7ERJ3 54 aa5.21□□□□□ -1.58
CLSTN3-212ENST00000541770 NHP2Q9NX24 153 aaKnown RBP5.21□□□□□ -1.58
CLSTN3-212ENST00000541770 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
CLSTN3-212ENST00000541770 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
CLSTN3-212ENST00000541770 TRAV13-2A0A0B4J235 113 aa5.19□□□□□ -1.58
CLSTN3-212ENST00000541770 ETDCA0A1B0GVM5 59 aa5.19□□□□□ -1.58
CLSTN3-212ENST00000541770 A4D1N5 150 aa5.19□□□□□ -1.58
CLSTN3-212ENST00000541770 ZNF73O43830 326 aaPredicted RBP5.19□□□□□ -1.58
CLSTN3-212ENST00000541770 PRLHP81277 87 aa5.19□□□□□ -1.58
CLSTN3-212ENST00000541770 RAB37Q96AX2 223 aa5.18□□□□□ -1.58
CLSTN3-212ENST00000541770 B5MCH6 92 aa5.17□□□□□ -1.58
CLSTN3-212ENST00000541770 KRTAP1-4P0C5Y4 121 aa5.17□□□□□ -1.58
CLSTN3-212ENST00000541770 Q6ZRX8 168 aa5.17□□□□□ -1.58
CLSTN3-212ENST00000541770 H7C2G1 150 aa5.16□□□□□ -1.58
CLSTN3-212ENST00000541770 TSPAN13O95857 204 aa5.16□□□□□ -1.58
CLSTN3-212ENST00000541770 GHRHP01286 108 aa5.16□□□□□ -1.58
CLSTN3-212ENST00000541770 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
CLSTN3-212ENST00000541770 MUC2Q02817 5179 aa5.15□□□□□ -1.58
CLSTN3-212ENST00000541770 TRBV7-6A0A0J9YX20 115 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 A0A1B0GWB2 263 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 Q1RN00 199 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 C6orf99Q4VX62 202 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 SMCR5Q8TEV8 140 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 HIGD2AQ9BW72 106 aa5.15□□□□□ -1.59
CLSTN3-212ENST00000541770 FAT4Q6V0I7 4981 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 A0A0B4J2C4 111 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 TAX1BP3O14907 124 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 CFC1BP0CG36 223 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 CFC1P0CG37 223 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 RPL13AP40429 203 aaKnown RBP5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 ELOF1P60002 83 aaKnown RBP5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 SMIM11BQ8TCY0 68 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 Q9BRP9 147 aa5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 ZNF706Q9Y5V0 76 aaPredicted RBP5.14□□□□□ -1.59
CLSTN3-212ENST00000541770 A0A1B0GV90 55 aa5.13□□□□□ -1.59
CLSTN3-212ENST00000541770 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
CLSTN3-212ENST00000541770 COX7BP24311 80 aa5.13□□□□□ -1.59
CLSTN3-212ENST00000541770 DHRS4-AS1Q9P1J3 65 aa5.13□□□□□ -1.59
CLSTN3-212ENST00000541770 PRO1854Q9UHT4 67 aa5.13□□□□□ -1.59
CLSTN3-212ENST00000541770 ERC2-IT1O76042 136 aa5.12□□□□□ -1.59
CLSTN3-212ENST00000541770 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
CLSTN3-212ENST00000541770 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
CLSTN3-212ENST00000541770 H3BUT2 72 aa5.11□□□□□ -1.59
CLSTN3-212ENST00000541770 CRYGAP11844 174 aa5.11□□□□□ -1.59
CLSTN3-212ENST00000541770 PSMB2P49721 201 aa5.11□□□□□ -1.59
CLSTN3-212ENST00000541770 A0A087X002 238 aa5.1□□□□□ -1.59
CLSTN3-212ENST00000541770 VAMP3Q15836 100 aa5.1□□□□□ -1.59
CLSTN3-212ENST00000541770 LINC00483Q53H64 154 aa5.1□□□□□ -1.59
CLSTN3-212ENST00000541770 FABP2P12104 132 aa5.09□□□□□ -1.59
CLSTN3-212ENST00000541770 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.59
CLSTN3-212ENST00000541770 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
CLSTN3-212ENST00000541770 A0A1W2PPM0 123 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms