RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 A0A087X002 238 aa11.91□□□□□ -0.5
RAP1B-223ENST00000541167 HMCN2Q8NDA2 5059 aa11.9□□□□□ -0.5
RAP1B-223ENST00000541167 OR13C6PQ8NH95 151 aa11.9□□□□□ -0.5
RAP1B-223ENST00000541167 COPS9Q8WXC6 57 aa11.9□□□□□ -0.5
RAP1B-223ENST00000541167 B5MCH6 92 aa11.88□□□□□ -0.51
RAP1B-223ENST00000541167 IFITM1P13164 125 aa11.88□□□□□ -0.51
RAP1B-223ENST00000541167 FAM229BQ4G0N7 80 aa11.88□□□□□ -0.51
RAP1B-223ENST00000541167 Q6ZVH6 145 aa11.88□□□□□ -0.51
RAP1B-223ENST00000541167 CBY1Q9Y3M2 126 aa11.88□□□□□ -0.51
RAP1B-223ENST00000541167 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
RAP1B-223ENST00000541167 LINC00518Q8N0U6 118 aa11.86□□□□□ -0.51
RAP1B-223ENST00000541167 TYMSOSQ8TAI1 123 aa11.86□□□□□ -0.51
RAP1B-223ENST00000541167 ZNF706Q9Y5V0 76 aaPredicted RBP11.86□□□□□ -0.51
RAP1B-223ENST00000541167 ZNF73O43830 326 aaPredicted RBP11.85□□□□□ -0.51
RAP1B-223ENST00000541167 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
RAP1B-223ENST00000541167 Q6ZRX8 168 aa11.84□□□□□ -0.51
RAP1B-223ENST00000541167 MUSTN1Q8IVN3 82 aa11.84□□□□□ -0.51
RAP1B-223ENST00000541167 PPDPFQ9H3Y8 114 aa11.84□□□□□ -0.51
RAP1B-223ENST00000541167 KRTAP13-2Q52LG2 175 aa11.83□□□□□ -0.52
RAP1B-223ENST00000541167 HINT1P49773 126 aaPredicted RBP11.81□□□□□ -0.52
RAP1B-223ENST00000541167 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
RAP1B-223ENST00000541167 Q9BRP9 147 aa11.81□□□□□ -0.52
RAP1B-223ENST00000541167 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
RAP1B-223ENST00000541167 TMA7Q9Y2S6 64 aaKnown RBP11.79□□□□□ -0.52
RAP1B-223ENST00000541167 COX8AP10176 69 aa11.78□□□□□ -0.52
RAP1B-223ENST00000541167 A6NDN8 102 aa11.77□□□□□ -0.53
RAP1B-223ENST00000541167 PAM16Q9Y3D7 125 aa11.77□□□□□ -0.53
RAP1B-223ENST00000541167 C3orf22Q8N5N4 141 aa11.76□□□□□ -0.53
RAP1B-223ENST00000541167 C6orf99Q4VX62 202 aa11.75□□□□□ -0.53
RAP1B-223ENST00000541167 SPATA45Q537H7 98 aa11.75□□□□□ -0.53
RAP1B-223ENST00000541167 GAGE2AQ6NT46 116 aa11.75□□□□□ -0.53
RAP1B-223ENST00000541167 VAMP8Q9BV40 100 aa11.75□□□□□ -0.53
RAP1B-223ENST00000541167 TSPAN13O95857 204 aa11.74□□□□□ -0.53
RAP1B-223ENST00000541167 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
RAP1B-223ENST00000541167 LINC00304Q8N9R0 145 aa11.73□□□□□ -0.53
RAP1B-223ENST00000541167 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
RAP1B-223ENST00000541167 DLEU1O43261 78 aa11.72□□□□□ -0.53
RAP1B-223ENST00000541167 COX7BP24311 80 aa11.72□□□□□ -0.53
RAP1B-223ENST00000541167 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
RAP1B-223ENST00000541167 ELOF1P60002 83 aaKnown RBP11.71□□□□□ -0.53
RAP1B-223ENST00000541167 A4D1N5 150 aa11.7□□□□□ -0.54
RAP1B-223ENST00000541167 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
RAP1B-223ENST00000541167 DHRS4-AS1Q9P1J3 65 aa11.69□□□□□ -0.54
RAP1B-223ENST00000541167 ST20-AS1Q8NBB2 130 aa11.68□□□□□ -0.54
RAP1B-223ENST00000541167 TRBV7-6A0A0J9YX20 115 aa11.66□□□□□ -0.54
RAP1B-223ENST00000541167 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
RAP1B-223ENST00000541167 IGLV9-49A0A0B4J1Y8 123 aa11.65□□□□□ -0.54
RAP1B-223ENST00000541167 A0A1B0GWB2 263 aa11.65□□□□□ -0.54
RAP1B-223ENST00000541167 PYY3Q5JQD4 70 aa11.65□□□□□ -0.54
RAP1B-223ENST00000541167 SMIM11BQ8TCY0 68 aa11.65□□□□□ -0.54
RAP1B-223ENST00000541167 C12orf57Q99622 126 aa11.64□□□□□ -0.55
RAP1B-223ENST00000541167 MOBPQ13875 183 aa11.63□□□□□ -0.55
RAP1B-223ENST00000541167 PRR4Q16378 134 aa11.63□□□□□ -0.55
RAP1B-223ENST00000541167 Q8NBF4 154 aa11.63□□□□□ -0.55
RAP1B-223ENST00000541167 HIGD1BQ9P298 99 aa11.63□□□□□ -0.55
RAP1B-223ENST00000541167 C4orf48Q5BLP8 95 aa11.61□□□□□ -0.55
RAP1B-223ENST00000541167 C2orf91Q6ZV80 131 aa11.61□□□□□ -0.55
RAP1B-223ENST00000541167 SPAG11AQ6PDA7 123 aa11.6□□□□□ -0.55
RAP1B-223ENST00000541167 C9orf153Q5TBE3 101 aa11.59□□□□□ -0.55
RAP1B-223ENST00000541167 SPRR1BP22528 89 aa11.58□□□□□ -0.56
RAP1B-223ENST00000541167 RNF213Q63HN8 5207 aa11.58□□□□□ -0.56
RAP1B-223ENST00000541167 CTAG1AP78358 180 aa11.57□□□□□ -0.56
RAP1B-223ENST00000541167 SSBP3-AS1Q7Z2R9 100 aa11.57□□□□□ -0.56
RAP1B-223ENST00000541167 LRP2P98164 4655 aa11.57□□□□□ -0.56
RAP1B-223ENST00000541167 VAMP3Q15836 100 aa11.56□□□□□ -0.56
RAP1B-223ENST00000541167 TAL2Q16559 108 aa11.56□□□□□ -0.56
RAP1B-223ENST00000541167 DEFB105AQ8NG35 78 aa11.56□□□□□ -0.56
RAP1B-223ENST00000541167 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
RAP1B-223ENST00000541167 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
RAP1B-223ENST00000541167 SLC25A20O43772 301 aa11.53□□□□□ -0.56
RAP1B-223ENST00000541167 RAB37Q96AX2 223 aa11.53□□□□□ -0.56
RAP1B-223ENST00000541167 LAMTOR3Q9UHA4 124 aa11.53□□□□□ -0.56
RAP1B-223ENST00000541167 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.57
RAP1B-223ENST00000541167 CFC1BP0CG36 223 aa11.52□□□□□ -0.57
RAP1B-223ENST00000541167 CFC1P0CG37 223 aa11.52□□□□□ -0.57
RAP1B-223ENST00000541167 CEND1Q8N111 149 aa11.52□□□□□ -0.57
RAP1B-223ENST00000541167 H7C2G1 150 aa11.51□□□□□ -0.57
RAP1B-223ENST00000541167 SPINK1P00995 79 aa11.51□□□□□ -0.57
RAP1B-223ENST00000541167 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
RAP1B-223ENST00000541167 Q1RN00 199 aa11.5□□□□□ -0.57
RAP1B-223ENST00000541167 LPAP08519 4548 aa11.49□□□□□ -0.57
RAP1B-223ENST00000541167 IGLV5-48A0A075B6I7 105 aa11.49□□□□□ -0.57
RAP1B-223ENST00000541167 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
RAP1B-223ENST00000541167 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
RAP1B-223ENST00000541167 A6NJY4 79 aa11.48□□□□□ -0.57
RAP1B-223ENST00000541167 BVES-AS1Q5T3Y7 98 aa11.48□□□□□ -0.57
RAP1B-223ENST00000541167 LINC01547P58512 204 aaPredicted RBP11.47□□□□□ -0.57
RAP1B-223ENST00000541167 hADV29S1A0JD25 119 aa11.46□□□□□ -0.57
RAP1B-223ENST00000541167 FXYD2P54710 66 aa11.45□□□□□ -0.58
RAP1B-223ENST00000541167 HSD52Q0P140 79 aa11.45□□□□□ -0.58
RAP1B-223ENST00000541167 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
RAP1B-223ENST00000541167 RPS29P62273 56 aaKnown RBP11.43□□□□□ -0.58
RAP1B-223ENST00000541167 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
RAP1B-223ENST00000541167 Q8N377 158 aa11.43□□□□□ -0.58
RAP1B-223ENST00000541167 IGLV7-46A0A075B6I9 117 aa11.42□□□□□ -0.58
RAP1B-223ENST00000541167 Q6ZQY7 126 aa11.42□□□□□ -0.58
RAP1B-223ENST00000541167 PRO1854Q9UHT4 67 aa11.42□□□□□ -0.58
RAP1B-223ENST00000541167 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
RAP1B-223ENST00000541167 HRCT1Q6UXD1 115 aa11.39□□□□□ -0.59
RAP1B-223ENST00000541167 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms