RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 FAT3Q8TDW7 4589 aa11.74□□□□□ -0.53
DDX55-207ENST00000540763 TRAV23DV6A0A075B6W5 121 aa11.72□□□□□ -0.53
DDX55-207ENST00000540763 PRLHP81277 87 aa11.72□□□□□ -0.53
DDX55-207ENST00000540763 SLC25A34Q6PIV7 304 aa11.72□□□□□ -0.53
DDX55-207ENST00000540763 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
DDX55-207ENST00000540763 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.53
DDX55-207ENST00000540763 ETDCA0A1B0GVM5 59 aa11.71□□□□□ -0.53
DDX55-207ENST00000540763 HIGD1BQ9P298 99 aa11.71□□□□□ -0.53
DDX55-207ENST00000540763 KRTAP1-4P0C5Y4 121 aa11.69□□□□□ -0.54
DDX55-207ENST00000540763 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
DDX55-207ENST00000540763 ZNF73O43830 326 aaPredicted RBP11.67□□□□□ -0.54
DDX55-207ENST00000540763 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
DDX55-207ENST00000540763 HIST1H4GQ99525 98 aa11.67□□□□□ -0.54
DDX55-207ENST00000540763 TRAV13-2A0A0B4J235 113 aa11.66□□□□□ -0.54
DDX55-207ENST00000540763 B5MCH6 92 aa11.66□□□□□ -0.54
DDX55-207ENST00000540763 Q6ZRX8 168 aa11.65□□□□□ -0.54
DDX55-207ENST00000540763 C2orf91Q6ZV80 131 aa11.65□□□□□ -0.54
DDX55-207ENST00000540763 HINT1P49773 126 aaPredicted RBP11.64□□□□□ -0.55
DDX55-207ENST00000540763 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
DDX55-207ENST00000540763 A4D1N5 150 aa11.63□□□□□ -0.55
DDX55-207ENST00000540763 TAL2Q16559 108 aa11.63□□□□□ -0.55
DDX55-207ENST00000540763 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
DDX55-207ENST00000540763 A6NDN8 102 aa11.61□□□□□ -0.55
DDX55-207ENST00000540763 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
DDX55-207ENST00000540763 SMIM6P0DI80 62 aa11.6□□□□□ -0.55
DDX55-207ENST00000540763 SMCR5Q8TEV8 140 aa11.6□□□□□ -0.55
DDX55-207ENST00000540763 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
DDX55-207ENST00000540763 TRBV7-6A0A0J9YX20 115 aa11.59□□□□□ -0.55
DDX55-207ENST00000540763 FAM229BQ4G0N7 80 aa11.59□□□□□ -0.55
DDX55-207ENST00000540763 C6orf99Q4VX62 202 aa11.58□□□□□ -0.56
DDX55-207ENST00000540763 Q9BRP9 147 aa11.58□□□□□ -0.56
DDX55-207ENST00000540763 UQCR10Q9UDW1 63 aa11.58□□□□□ -0.56
DDX55-207ENST00000540763 ELOF1P60002 83 aaKnown RBP11.57□□□□□ -0.56
DDX55-207ENST00000540763 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
DDX55-207ENST00000540763 TNXBP22105 4242 aa11.56□□□□□ -0.56
DDX55-207ENST00000540763 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
DDX55-207ENST00000540763 CRYGAP11844 174 aa11.55□□□□□ -0.56
DDX55-207ENST00000540763 CEND1Q8N111 149 aa11.55□□□□□ -0.56
DDX55-207ENST00000540763 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
DDX55-207ENST00000540763 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
DDX55-207ENST00000540763 A6NJY4 79 aa11.54□□□□□ -0.56
DDX55-207ENST00000540763 COX7BP24311 80 aa11.54□□□□□ -0.56
DDX55-207ENST00000540763 DHRS4-AS1Q9P1J3 65 aa11.54□□□□□ -0.56
DDX55-207ENST00000540763 SMIM11BQ8TCY0 68 aa11.53□□□□□ -0.56
DDX55-207ENST00000540763 A0A087X002 238 aa11.52□□□□□ -0.57
DDX55-207ENST00000540763 A0A0B4J2C4 111 aa11.52□□□□□ -0.57
DDX55-207ENST00000540763 LOC105371267A0A1B0GV96 52 aa11.52□□□□□ -0.57
DDX55-207ENST00000540763 HSD52Q0P140 79 aa11.52□□□□□ -0.57
DDX55-207ENST00000540763 ERC2-IT1O76042 136 aa11.51□□□□□ -0.57
DDX55-207ENST00000540763 C12orf57Q99622 126 aa11.51□□□□□ -0.57
DDX55-207ENST00000540763 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
DDX55-207ENST00000540763 CFC1P0CG37 223 aa11.5□□□□□ -0.57
DDX55-207ENST00000540763 LINC00483Q53H64 154 aa11.5□□□□□ -0.57
DDX55-207ENST00000540763 RAB37Q96AX2 223 aa11.48□□□□□ -0.57
DDX55-207ENST00000540763 ANAPC11Q9NYG5 84 aa11.48□□□□□ -0.57
DDX55-207ENST00000540763 HMCN2Q8NDA2 5059 aa11.48□□□□□ -0.57
DDX55-207ENST00000540763 FXYD2P54710 66 aa11.46□□□□□ -0.57
DDX55-207ENST00000540763 VAMP3Q15836 100 aa11.46□□□□□ -0.57
DDX55-207ENST00000540763 KRTAP13-2Q52LG2 175 aa11.46□□□□□ -0.57
DDX55-207ENST00000540763 TYMSOSQ8TAI1 123 aa11.46□□□□□ -0.57
DDX55-207ENST00000540763 NHP2Q9NX24 153 aaKnown RBP11.45□□□□□ -0.58
DDX55-207ENST00000540763 BVES-AS1Q5T3Y7 98 aa11.43□□□□□ -0.58
DDX55-207ENST00000540763 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
DDX55-207ENST00000540763 PRO1854Q9UHT4 67 aa11.42□□□□□ -0.58
DDX55-207ENST00000540763 SPRR1BP22528 89 aa11.41□□□□□ -0.58
DDX55-207ENST00000540763 PRO1933Q9H354 126 aa11.41□□□□□ -0.58
DDX55-207ENST00000540763 UBR4Q5T4S7 5183 aa11.4□□□□□ -0.58
DDX55-207ENST00000540763 SLC25A20O43772 301 aa11.4□□□□□ -0.58
DDX55-207ENST00000540763 ST20-AS1Q8NBB2 130 aa11.4□□□□□ -0.58
DDX55-207ENST00000540763 C3orf22Q8N5N4 141 aa11.39□□□□□ -0.59
DDX55-207ENST00000540763 LINC00575Q6W349 94 aa11.38□□□□□ -0.59
DDX55-207ENST00000540763 H7C2G1 150 aa11.37□□□□□ -0.59
DDX55-207ENST00000540763 CTAG1AP78358 180 aa11.37□□□□□ -0.59
DDX55-207ENST00000540763 TSTD3H0UI37 97 aa11.36□□□□□ -0.59
DDX55-207ENST00000540763 IGLV5-48A0A075B6I7 105 aa11.35□□□□□ -0.59
DDX55-207ENST00000540763 Q1RN00 199 aa11.35□□□□□ -0.59
DDX55-207ENST00000540763 H0YGX0 51 aa11.34□□□□□ -0.59
DDX55-207ENST00000540763 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
DDX55-207ENST00000540763 TEX49A0A1B0GTD5 131 aa11.33□□□□□ -0.6
DDX55-207ENST00000540763 hADV29S1A0JD25 119 aa11.33□□□□□ -0.6
DDX55-207ENST00000540763 M0R143 59 aa11.32□□□□□ -0.6
DDX55-207ENST00000540763 SSBP3-AS1Q7Z2R9 100 aa11.32□□□□□ -0.6
DDX55-207ENST00000540763 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
DDX55-207ENST00000540763 IGLV9-49A0A0B4J1Y8 123 aa11.3□□□□□ -0.6
DDX55-207ENST00000540763 MOBPQ13875 183 aa11.3□□□□□ -0.6
DDX55-207ENST00000540763 SPAG11AQ6PDA7 123 aa11.3□□□□□ -0.6
DDX55-207ENST00000540763 LAMTOR3Q9UHA4 124 aa11.3□□□□□ -0.6
DDX55-207ENST00000540763 K7ERJ3 54 aa11.29□□□□□ -0.6
DDX55-207ENST00000540763 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.29□□□□□ -0.6
DDX55-207ENST00000540763 Q8NBF4 154 aa11.29□□□□□ -0.6
DDX55-207ENST00000540763 SNCGO76070 127 aa11.28□□□□□ -0.6
DDX55-207ENST00000540763 Q6ZQY7 126 aa11.28□□□□□ -0.6
DDX55-207ENST00000540763 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
DDX55-207ENST00000540763 A0A1B0GX51 115 aa11.27□□□□□ -0.61
DDX55-207ENST00000540763 TRIAP1O43715 76 aa11.27□□□□□ -0.61
DDX55-207ENST00000540763 C9orf153Q5TBE3 101 aa11.26□□□□□ -0.61
DDX55-207ENST00000540763 Q8N377 158 aa11.26□□□□□ -0.61
DDX55-207ENST00000540763 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
DDX55-207ENST00000540763 TSPAN13O95857 204 aa11.25□□□□□ -0.61
DDX55-207ENST00000540763 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms