RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 FRYQ5TBA9 3013 aa3.86□□□□□ -1.79
SNHG1-211ENST00000539921 ROS1P08922 2347 aa3.86□□□□□ -1.79
SNHG1-211ENST00000539921 A0A087WSZ3 146 aa3.86□□□□□ -1.79
SNHG1-211ENST00000539921 ADM2Q7Z4H4 148 aa3.86□□□□□ -1.79
SNHG1-211ENST00000539921 C4orf3Q8WVX3 66 aa3.86□□□□□ -1.79
SNHG1-211ENST00000539921 ANKRD11Q6UB99 2663 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-211ENST00000539921 ITPR1Q14643 2758 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 AKAP13Q12802 2813 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 PKD1L2Q7Z442 2459 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 IGKV2-24A0A0C4DH68 120 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 REG3GQ6UW15 175 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 ZFHX4Q86UP3 3567 aa3.85□□□□□ -1.79
SNHG1-211ENST00000539921 DNAJC9-AS1A6NH13 148 aa3.84□□□□□ -1.79
SNHG1-211ENST00000539921 PRB2P02812 416 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-211ENST00000539921 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
SNHG1-211ENST00000539921 TLX1NBP0CAT3 122 aa3.84□□□□□ -1.79
SNHG1-211ENST00000539921 ACYP2P14621 99 aa3.84□□□□□ -1.79
SNHG1-211ENST00000539921 MIR22HGQ0VDD5 57 aa3.84□□□□□ -1.79
SNHG1-211ENST00000539921 WFDC10BQ8IUB3 73 aa3.84□□□□□ -1.79
SNHG1-211ENST00000539921 RP1L1Q8IWN7 2480 aaPredicted RBP3.84□□□□□ -1.8
SNHG1-211ENST00000539921 MMP24-AS1A0A0U1RRL7 71 aa3.83□□□□□ -1.8
SNHG1-211ENST00000539921 LY6EQ16553 131 aa3.83□□□□□ -1.8
SNHG1-211ENST00000539921 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
SNHG1-211ENST00000539921 CLPSL2Q6UWE3 100 aa3.83□□□□□ -1.8
SNHG1-211ENST00000539921 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
SNHG1-211ENST00000539921 ANKHD1Q8IWZ3 2542 aaKnown RBP3.83□□□□□ -1.8
SNHG1-211ENST00000539921 CFAP47Q6ZTR5 3102 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 A0A1B0GU69 56 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 ZNF861PO60384 105 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 MSMBP08118 114 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 GIG44P09565 113 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-211ENST00000539921 LELP1Q5T871 98 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 CAMK2N2Q96S95 79 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 DMXL2Q8TDJ6 3036 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 FAM208BQ5VWN6 2430 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 PCNX1Q96RV3 2341 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 CR1P17927 2039 aa3.82□□□□□ -1.8
SNHG1-211ENST00000539921 LAMA5O15230 3695 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 APC2O95996 2303 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 XP32Q5T750 250 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 IGFL1Q6UW32 110 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 BRD3OSQ6XYD6 125 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 DSPP15924 2871 aaKnown RBP3.81□□□□□ -1.8
SNHG1-211ENST00000539921 CELSR3Q9NYQ7 3312 aa3.81□□□□□ -1.8
SNHG1-211ENST00000539921 ACACAQ13085 2346 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 IGLV10-54A0A075B6I4 117 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 SPRR1BP22528 89 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 DEFB105AQ8NG35 78 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 DMAC1Q96GE9 116 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
SNHG1-211ENST00000539921 IGSF10Q6WRI0 2623 aa3.79□□□□□ -1.8
SNHG1-211ENST00000539921 ZFYVE26Q68DK2 2539 aa3.79□□□□□ -1.8
SNHG1-211ENST00000539921 PIEZO2Q9H5I5 2752 aa3.79□□□□□ -1.8
SNHG1-211ENST00000539921 LOC400499M0QZD8 3231 aa3.78□□□□□ -1.8
SNHG1-211ENST00000539921 INAFM1C9JVW0 142 aa3.78□□□□□ -1.8
SNHG1-211ENST00000539921 COL6A6A6NMZ7 2263 aa3.78□□□□□ -1.8
SNHG1-211ENST00000539921 SMG1Q96Q15 3661 aaKnown RBP3.77□□□□□ -1.81
SNHG1-211ENST00000539921 RPL37AP61513 92 aaKnown RBP3.77□□□□□ -1.81
SNHG1-211ENST00000539921 PCOTHQ58A44 107 aa3.77□□□□□ -1.81
SNHG1-211ENST00000539921 KALRNO60229 2985 aa3.77□□□□□ -1.81
SNHG1-211ENST00000539921 CFAP46Q8IYW2 2715 aa3.76□□□□□ -1.81
SNHG1-211ENST00000539921 ATMQ13315 3056 aa3.75□□□□□ -1.81
SNHG1-211ENST00000539921 DEFB116Q30KQ4 102 aa3.75□□□□□ -1.81
SNHG1-211ENST00000539921 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
SNHG1-211ENST00000539921 KRTAP26-1Q6PEX3 210 aa3.75□□□□□ -1.81
SNHG1-211ENST00000539921 WWC2-AS2Q96NR7 200 aa3.75□□□□□ -1.81
SNHG1-211ENST00000539921 CREBBPQ92793 2442 aa3.74□□□□□ -1.81
SNHG1-211ENST00000539921 IGLV7-43P04211 117 aa3.74□□□□□ -1.81
SNHG1-211ENST00000539921 C10orf99Q6UWK7 81 aa3.74□□□□□ -1.81
SNHG1-211ENST00000539921 C15orf56Q8N910 161 aa3.74□□□□□ -1.81
SNHG1-211ENST00000539921 C8orf17Q9NRJ1 99 aa3.74□□□□□ -1.81
SNHG1-211ENST00000539921 AKAP6Q13023 2319 aa3.73□□□□□ -1.81
SNHG1-211ENST00000539921 TLN1Q9Y490 2541 aaKnown RBP3.73□□□□□ -1.81
SNHG1-211ENST00000539921 H3BNG1 76 aa3.73□□□□□ -1.81
SNHG1-211ENST00000539921 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
SNHG1-211ENST00000539921 BSNQ9UPA5 3926 aa3.73□□□□□ -1.81
SNHG1-211ENST00000539921 BOD1L1Q8NFC6 3051 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 C2CD3Q4AC94 2353 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 IGLV5-52A0A0A0MRZ9 124 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 FAM168BA1KXE4 195 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 A8MUU9 505 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 Q6YL49 198 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
SNHG1-211ENST00000539921 SPTA1P02549 2419 aa3.72□□□□□ -1.81
SNHG1-211ENST00000539921 UBR5O95071 2799 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-211ENST00000539921 SPENQ96T58 3664 aaKnown RBP3.72□□□□□ -1.81
SNHG1-211ENST00000539921 GCN1Q92616 2671 aaKnown RBP3.71□□□□□ -1.82
SNHG1-211ENST00000539921 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 DEFB130BP0DP73 79 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 DEFB130AP0DP74 79 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 ATRXP46100 2492 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.71□□□□□ -1.823e-19■■■■■ 82.1
SNHG1-211ENST00000539921 ZNF462Q96JM2 2506 aa3.71□□□□□ -1.82
SNHG1-211ENST00000539921 HELZ2Q9BYK8 2649 aaKnown RBP3.7□□□□□ -1.82
SNHG1-211ENST00000539921 A0A1B0GVX0 72 aa3.7□□□□□ -1.82
SNHG1-211ENST00000539921 NUPR2A6NF83 97 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms