RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 IMUPQ9GZP8 106 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 TMEM126AQ9H061 195 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 CDKN2A-AS1Q9UH64 79 aa2.81□□□□□ -1.96
SNHG1-208ENST00000538266 TRAV13-2A0A0B4J235 113 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 FAM236AA0A1B0GUQ0 79 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 FAM236BA0A1B0GV22 79 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 C16orf90A8MZG2 172 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 CXCL5P42830 114 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 COX6A2Q02221 97 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 SPAG11BQ08648 103 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 C15orf56Q8N910 161 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 PKIGQ9Y2B9 76 aa2.8□□□□□ -1.96
SNHG1-208ENST00000538266 HUWE1Q7Z6Z7 4374 aaKnown RBP2.79□□□□□ -1.96
SNHG1-208ENST00000538266 A0A087X002 238 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 A0A1B0GVY2 172 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 F8WDY8 70 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 DNAL4O96015 105 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 BAALC-AS2P0C853 105 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
SNHG1-208ENST00000538266 CNBPP62633 177 aaKnown RBP2.79□□□□□ -1.96
SNHG1-208ENST00000538266 SYCNQ0VAF6 134 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 C6orf226Q5I0X4 101 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 SDIM1Q6ZPB5 146 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 LINC01561Q8N1V8 128 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 SMIM20Q8N5G0 67 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-208ENST00000538266 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
SNHG1-208ENST00000538266 CSMD3Q7Z407 3707 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 ATOX1O00244 68 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 UQCRQO14949 82 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 SOSTDC1Q6X4U4 206 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 Q8IZM0 81 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 C3orf22Q8N5N4 141 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 COX7B2Q8TF08 81 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 LINC00526Q96FQ7 95 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 C2orf48Q96LS8 159 aa2.78□□□□□ -1.96
SNHG1-208ENST00000538266 A0A0U1RRA0 63 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 CDK2AP2O75956 126 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 RPL28P46779 137 aaKnown RBP2.77□□□□□ -1.97
SNHG1-208ENST00000538266 RPL18AQ02543 176 aaKnown RBP2.77□□□□□ -1.97
SNHG1-208ENST00000538266 Q6JHZ5 121 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 SMCR5Q8TEV8 140 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 DPH3Q96FX2 82 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 DNAH9Q9NYC9 4486 aa2.77□□□□□ -1.97
SNHG1-208ENST00000538266 LOC107984640A0A0U1RRK4 108 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 H0YGX0 51 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 J3KT08 172 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 KRTAP10-6P60371 365 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-208ENST00000538266 HIST1H4AP62805 103 aaKnown RBP2.76□□□□□ -1.97
SNHG1-208ENST00000538266 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 Q6ZRU5 148 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 C9orf163Q8N9P6 203 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 FAM218AQ96MZ4 157 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 SND1-IT1Q9HBX3 110 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 LINC00474Q9P2X8 69 aa2.76□□□□□ -1.97
SNHG1-208ENST00000538266 IGKV2-24A0A0C4DH68 120 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 A0A1B0GX51 115 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 COX7CP15954 63 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 LINC00158P58513 81 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 MIR7-3HGQ8N6C7 128 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 OBSCN-AS1Q96MR7 158 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 C6orf48Q9UBA6 75 aa2.75□□□□□ -1.97
SNHG1-208ENST00000538266 IGKV2-28A0A075B6P5 120 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 A0A096LNI7 61 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 IGKV2D-28P01615 120 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 CHTF8P0CG12 524 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 CRYGAP11844 174 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 PFN2P35080 140 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 TMEM258P61165 79 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 COX17Q14061 63 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 C9orf116Q5BN46 136 aaPredicted RBP2.74□□□□□ -1.97
SNHG1-208ENST00000538266 KRTAP7-1Q8IUC3 87 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 SMIM11BQ8TCY0 68 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 ORMDL1Q9P0S3 153 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 C22orf24Q9Y442 160 aa2.74□□□□□ -1.97
SNHG1-208ENST00000538266 IGLV7-46A0A075B6I9 117 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 TLX1NBP0CAT3 122 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 Q6ZSA8 131 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 SCXQ7RTU7 201 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 SPACA4Q8TDM5 124 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 LINC00167Q96N53 147 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
SNHG1-208ENST00000538266 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 JMJD7-PLA2G4BH0Y9G9 81 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 CCKP06307 115 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 HAMPP81172 84 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 Q6ZRP5 223 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 XAGE1AQ9HD64 81 aa2.72□□□□□ -1.97
SNHG1-208ENST00000538266 IGKV3D-7A0A0C4DH55 119 aa2.71□□□□□ -1.98
SNHG1-208ENST00000538266 hADV29S1A0JD25 119 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms