RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
PHRF1-205ENST00000533464 SPACA4Q8TDM5 124 aa11.65□□□□□ -0.54
PHRF1-205ENST00000533464 SPINK1P00995 79 aa11.65□□□□□ -0.54
PHRF1-205ENST00000533464 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
PHRF1-205ENST00000533464 KCNQ1DNQ9H478 68 aa11.64□□□□□ -0.55
PHRF1-205ENST00000533464 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
PHRF1-205ENST00000533464 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
PHRF1-205ENST00000533464 IGLV1-50A0A075B6I6 118 aa11.63□□□□□ -0.55
PHRF1-205ENST00000533464 MAP1AP78559 2803 aaPredicted RBP11.62□□□□□ -0.55
PHRF1-205ENST00000533464 IGKV2D-30A0A075B6S6 120 aa11.61□□□□□ -0.55
PHRF1-205ENST00000533464 IGKV2-30P06310 120 aa11.61□□□□□ -0.55
PHRF1-205ENST00000533464 VPS13AQ96RL7 3174 aa11.61□□□□□ -0.55
PHRF1-205ENST00000533464 TP53AIP1Q9HCN2 124 aa11.6□□□□□ -0.55
PHRF1-205ENST00000533464 C1orf195Q5TG92 126 aa11.6□□□□□ -0.55
PHRF1-205ENST00000533464 RPL37AP61513 92 aaKnown RBP11.6□□□□□ -0.55
PHRF1-205ENST00000533464 TRBV7-4A0A0J9YYF1 115 aa11.6□□□□□ -0.55
PHRF1-205ENST00000533464 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
PHRF1-205ENST00000533464 DSPP15924 2871 aaKnown RBP11.59□□□□□ -0.55
PHRF1-205ENST00000533464 PMAIP1Q13794 54 aa11.57□□□□□ -0.56
PHRF1-205ENST00000533464 CDH23Q9H251 3354 aa11.56□□□□□ -0.56
PHRF1-205ENST00000533464 C9orf129Q5T035 196 aaKnown RBP11.56□□□□□ -0.56
PHRF1-205ENST00000533464 TEP1Q99973 2627 aaKnown RBP11.54□□□□□ -0.56
PHRF1-205ENST00000533464 TRAV22A0A0B4J277 110 aa11.52□□□□□ -0.57
PHRF1-205ENST00000533464 K7EQZ3 153 aa11.51□□□□□ -0.57
PHRF1-205ENST00000533464 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
PHRF1-205ENST00000533464 Q8N377 158 aa11.5□□□□□ -0.57
PHRF1-205ENST00000533464 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
PHRF1-205ENST00000533464 TEX15Q9BXT5 2789 aa11.48□□□□□ -0.57
PHRF1-205ENST00000533464 TYMSOSQ8TAI1 123 aa11.48□□□□□ -0.57
PHRF1-205ENST00000533464 H3BPC8 53 aa11.47□□□□□ -0.57
PHRF1-205ENST00000533464 IGFL1Q6UW32 110 aa11.47□□□□□ -0.57
PHRF1-205ENST00000533464 LINC00313P59037 77 aa11.46□□□□□ -0.57
PHRF1-205ENST00000533464 CASC10Q5T4H9 136 aa11.46□□□□□ -0.57
PHRF1-205ENST00000533464 A8MWP4 228 aa11.46□□□□□ -0.57
PHRF1-205ENST00000533464 TLX1NBP0CAT3 122 aa11.46□□□□□ -0.57
PHRF1-205ENST00000533464 C7orf65Q6ZTY9 151 aa11.44□□□□□ -0.58
PHRF1-205ENST00000533464 C9orf163Q8N9P6 203 aa11.44□□□□□ -0.58
PHRF1-205ENST00000533464 A0A0G2JQZ4 141 aa11.43□□□□□ -0.58
PHRF1-205ENST00000533464 A0A1W2PNN7 141 aa11.43□□□□□ -0.58
PHRF1-205ENST00000533464 ACYP2P14621 99 aa11.42□□□□□ -0.58
PHRF1-205ENST00000533464 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
PHRF1-205ENST00000533464 PLA2G2DQ9UNK4 145 aa11.42□□□□□ -0.58
PHRF1-205ENST00000533464 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
PHRF1-205ENST00000533464 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
PHRF1-205ENST00000533464 A0A087WTM6 91 aa11.4□□□□□ -0.59
PHRF1-205ENST00000533464 FRYQ5TBA9 3013 aa11.39□□□□□ -0.59
PHRF1-205ENST00000533464 SPAG11AQ6PDA7 123 aa11.39□□□□□ -0.59
PHRF1-205ENST00000533464 PLA2G1BP04054 148 aaKnown RBP11.37□□□□□ -0.59
PHRF1-205ENST00000533464 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
PHRF1-205ENST00000533464 ERC2-IT1O76042 136 aa11.37□□□□□ -0.59
PHRF1-205ENST00000533464 A0A1B0GU69 56 aa11.36□□□□□ -0.59
PHRF1-205ENST00000533464 ZNF861PO60384 105 aa11.36□□□□□ -0.59
PHRF1-205ENST00000533464 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
PHRF1-205ENST00000533464 MRPL34Q9BQ48 92 aaKnown RBP11.35□□□□□ -0.59
PHRF1-205ENST00000533464 SETXQ7Z333 2677 aaKnown RBP11.35□□□□□ -0.59
PHRF1-205ENST00000533464 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
PHRF1-205ENST00000533464 PRO0628Q9UI54 55 aa11.34□□□□□ -0.59
PHRF1-205ENST00000533464 APLNQ9ULZ1 77 aa11.34□□□□□ -0.59
PHRF1-205ENST00000533464 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
PHRF1-205ENST00000533464 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
PHRF1-205ENST00000533464 IGSF10Q6WRI0 2623 aa11.33□□□□□ -0.6
PHRF1-205ENST00000533464 Q96NJ1 140 aa11.32□□□□□ -0.6
PHRF1-205ENST00000533464 NOTCH1P46531 2555 aa11.32□□□□□ -0.6
PHRF1-205ENST00000533464 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
PHRF1-205ENST00000533464 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
PHRF1-205ENST00000533464 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
PHRF1-205ENST00000533464 LOC101927531A0A1B0GV80 90 aa11.31□□□□□ -0.6
PHRF1-205ENST00000533464 C8orf87E5RJ46 101 aa11.31□□□□□ -0.6
PHRF1-205ENST00000533464 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
PHRF1-205ENST00000533464 A0A1W2PNM2 257 aa11.3□□□□□ -0.6
PHRF1-205ENST00000533464 KLKP1Q107X0 134 aa11.29□□□□□ -0.6
PHRF1-205ENST00000533464 C8orf17Q9NRJ1 99 aa11.28□□□□□ -0.6
PHRF1-205ENST00000533464 CR1P17927 2039 aa11.28□□□□□ -0.6
PHRF1-205ENST00000533464 LAMA1P25391 3075 aa11.28□□□□□ -0.6
PHRF1-205ENST00000533464 SSBP3-AS1Q7Z2R9 100 aa11.27□□□□□ -0.6
PHRF1-205ENST00000533464 VCANP13611 3396 aa11.27□□□□□ -0.61
PHRF1-205ENST00000533464 PSORS1C2Q9UIG4 136 aa11.26□□□□□ -0.61
PHRF1-205ENST00000533464 UBR5O95071 2799 aaPredicted RBP11.24□□□□□ -0.61
PHRF1-205ENST00000533464 OBSCN-AS1Q96MR7 158 aa11.24□□□□□ -0.61
PHRF1-205ENST00000533464 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
PHRF1-205ENST00000533464 DSCR10P59022 87 aa11.23□□□□□ -0.61
PHRF1-205ENST00000533464 WIPF1O43516 503 aa11.22□□□□□ -0.61
PHRF1-205ENST00000533464 FREM2Q5SZK8 3169 aa11.22□□□□□ -0.61
PHRF1-205ENST00000533464 IGLV5-48A0A075B6I7 105 aa11.22□□□□□ -0.61
PHRF1-205ENST00000533464 IGLV5-37A0A075B6J1 123 aa11.22□□□□□ -0.61
PHRF1-205ENST00000533464 LINC01600Q96MT4 127 aa11.22□□□□□ -0.61
PHRF1-205ENST00000533464 SPRR4Q96PI1 79 aa11.21□□□□□ -0.62
PHRF1-205ENST00000533464 H7BZZ5 65 aa11.2□□□□□ -0.62
PHRF1-205ENST00000533464 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
PHRF1-205ENST00000533464 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
PHRF1-205ENST00000533464 COA5Q86WW8 74 aa11.2□□□□□ -0.62
PHRF1-205ENST00000533464 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
PHRF1-205ENST00000533464 IGLV8-61A0A075B6I0 122 aa11.17□□□□□ -0.62
PHRF1-205ENST00000533464 SMR3BP02814 79 aaPredicted RBP11.17□□□□□ -0.62
PHRF1-205ENST00000533464 A8MUN3 132 aa11.16□□□□□ -0.62
PHRF1-205ENST00000533464 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
PHRF1-205ENST00000533464 ATP11AUNQ6ZP68 121 aa11.15□□□□□ -0.62
PHRF1-205ENST00000533464 NBEAQ8NFP9 2946 aa11.14□□□□□ -0.63
PHRF1-205ENST00000533464 FLNCQ14315 2725 aa11.13□□□□□ -0.63
PHRF1-205ENST00000533464 ATMQ13315 3056 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms