RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 Q6ZVH6 145 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 SPANXDQ9BXN6 97 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 KCNQ1DNQ9H478 68 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 SPANXCQ9NY87 97 aa10.38□□□□□ -0.75
SMG1-203ENST00000532700 EIF4EBP3O60516 100 aaPredicted RBP10.37□□□□□ -0.75
SMG1-203ENST00000532700 IFITM1P13164 125 aa10.35□□□□□ -0.75
SMG1-203ENST00000532700 C3orf22Q8N5N4 141 aa10.35□□□□□ -0.75
SMG1-203ENST00000532700 RETNLBQ9BQ08 111 aa10.35□□□□□ -0.75
SMG1-203ENST00000532700 FAM229BQ4G0N7 80 aa10.34□□□□□ -0.75
SMG1-203ENST00000532700 PPDPFQ9H3Y8 114 aa10.34□□□□□ -0.75
SMG1-203ENST00000532700 TMA7Q9Y2S6 64 aaKnown RBP10.34□□□□□ -0.75
SMG1-203ENST00000532700 CBY1Q9Y3M2 126 aa10.34□□□□□ -0.75
SMG1-203ENST00000532700 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
SMG1-203ENST00000532700 IGLV6-57P01721 117 aa10.33□□□□□ -0.76
SMG1-203ENST00000532700 SPRR1AP35321 89 aa10.33□□□□□ -0.76
SMG1-203ENST00000532700 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
SMG1-203ENST00000532700 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
SMG1-203ENST00000532700 JOSD1Q15040 202 aaPredicted RBP10.32□□□□□ -0.76
SMG1-203ENST00000532700 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
SMG1-203ENST00000532700 KRTAP4-16G5E9R7 235 aaPredicted RBP10.3□□□□□ -0.76
SMG1-203ENST00000532700 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
SMG1-203ENST00000532700 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
SMG1-203ENST00000532700 COX8AP10176 69 aa10.29□□□□□ -0.76
SMG1-203ENST00000532700 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
SMG1-203ENST00000532700 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
SMG1-203ENST00000532700 VAMP8Q9BV40 100 aa10.29□□□□□ -0.76
SMG1-203ENST00000532700 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
SMG1-203ENST00000532700 SPATA45Q537H7 98 aa10.27□□□□□ -0.77
SMG1-203ENST00000532700 PAM16Q9Y3D7 125 aa10.27□□□□□ -0.77
SMG1-203ENST00000532700 DLEU1O43261 78 aa10.26□□□□□ -0.77
SMG1-203ENST00000532700 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
SMG1-203ENST00000532700 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
SMG1-203ENST00000532700 B5MCH6 92 aa10.25□□□□□ -0.77
SMG1-203ENST00000532700 MUC2Q02817 5179 aa10.25□□□□□ -0.77
SMG1-203ENST00000532700 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
SMG1-203ENST00000532700 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
SMG1-203ENST00000532700 Q6ZRX8 168 aa10.23□□□□□ -0.77
SMG1-203ENST00000532700 C14orf144Q96I85 54 aa10.23□□□□□ -0.77
SMG1-203ENST00000532700 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
SMG1-203ENST00000532700 TRAV13-2A0A0B4J235 113 aa10.21□□□□□ -0.77
SMG1-203ENST00000532700 A6NDN8 102 aa10.21□□□□□ -0.77
SMG1-203ENST00000532700 PYY3Q5JQD4 70 aa10.21□□□□□ -0.77
SMG1-203ENST00000532700 SLC25A34Q6PIV7 304 aa10.21□□□□□ -0.77
SMG1-203ENST00000532700 HIST1H4GQ99525 98 aa10.21□□□□□ -0.77
SMG1-203ENST00000532700 Q9BRP9 147 aa10.19□□□□□ -0.78
SMG1-203ENST00000532700 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
SMG1-203ENST00000532700 A4D1N5 150 aa10.17□□□□□ -0.78
SMG1-203ENST00000532700 TRBV7-6A0A0J9YX20 115 aa10.15□□□□□ -0.78
SMG1-203ENST00000532700 C6orf99Q4VX62 202 aa10.15□□□□□ -0.78
SMG1-203ENST00000532700 Q8NBF4 154 aa10.15□□□□□ -0.78
SMG1-203ENST00000532700 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
SMG1-203ENST00000532700 COX7BP24311 80 aa10.14□□□□□ -0.79
SMG1-203ENST00000532700 LINC00483Q53H64 154 aa10.14□□□□□ -0.79
SMG1-203ENST00000532700 IGLV7-46A0A075B6I9 117 aa10.13□□□□□ -0.79
SMG1-203ENST00000532700 GAGE2AQ6NT46 116 aa10.13□□□□□ -0.79
SMG1-203ENST00000532700 MUC17Q685J3 4493 aa10.13□□□□□ -0.79
SMG1-203ENST00000532700 ELOF1P60002 83 aaKnown RBP10.12□□□□□ -0.79
SMG1-203ENST00000532700 A0A1B0GWB2 263 aa10.11□□□□□ -0.79
SMG1-203ENST00000532700 TPRXLQ17RH7 258 aa10.11□□□□□ -0.79
SMG1-203ENST00000532700 C2orf91Q6ZV80 131 aa10.11□□□□□ -0.79
SMG1-203ENST00000532700 TAL2Q16559 108 aa10.1□□□□□ -0.79
SMG1-203ENST00000532700 SMIM11BQ8TCY0 68 aa10.1□□□□□ -0.79
SMG1-203ENST00000532700 VAMP3Q15836 100 aa10.09□□□□□ -0.79
SMG1-203ENST00000532700 IGLV9-49A0A0B4J1Y8 123 aa10.08□□□□□ -0.8
SMG1-203ENST00000532700 MOBPQ13875 183 aa10.08□□□□□ -0.8
SMG1-203ENST00000532700 C12orf57Q99622 126 aa10.08□□□□□ -0.8
SMG1-203ENST00000532700 ST20-AS1Q8NBB2 130 aa10.07□□□□□ -0.8
SMG1-203ENST00000532700 CTAG1AP78358 180 aa10.06□□□□□ -0.8
SMG1-203ENST00000532700 SPAG11AQ6PDA7 123 aa10.06□□□□□ -0.8
SMG1-203ENST00000532700 CEND1Q8N111 149 aa10.06□□□□□ -0.8
SMG1-203ENST00000532700 CDIP1Q9H305 208 aa10.06□□□□□ -0.8
SMG1-203ENST00000532700 TMEM238LA0A1B0GVL6 79 aa10.05□□□□□ -0.8
SMG1-203ENST00000532700 A6NJY4 79 aa10.05□□□□□ -0.8
SMG1-203ENST00000532700 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
SMG1-203ENST00000532700 NHP2Q9NX24 153 aaKnown RBP10.05□□□□□ -0.8
SMG1-203ENST00000532700 UQCR10Q9UDW1 63 aa10.05□□□□□ -0.8
SMG1-203ENST00000532700 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
SMG1-203ENST00000532700 CFC1P0CG37 223 aa10.04□□□□□ -0.8
SMG1-203ENST00000532700 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
SMG1-203ENST00000532700 SLC25A20O43772 301 aa10.02□□□□□ -0.81
SMG1-203ENST00000532700 KRTAP13-3Q3SY46 172 aa10.02□□□□□ -0.81
SMG1-203ENST00000532700 HSD52Q0P140 79 aa10.01□□□□□ -0.81
SMG1-203ENST00000532700 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
SMG1-203ENST00000532700 SPRR1BP22528 89 aa10□□□□□ -0.81
SMG1-203ENST00000532700 BVES-AS1Q5T3Y7 98 aa10□□□□□ -0.81
SMG1-203ENST00000532700 Q8N377 158 aa10□□□□□ -0.81
SMG1-203ENST00000532700 SPINK1P00995 79 aa9.99□□□□□ -0.81
SMG1-203ENST00000532700 LCE2AQ5TA79 106 aaPredicted RBP9.99□□□□□ -0.81
SMG1-203ENST00000532700 SSBP3-AS1Q7Z2R9 100 aa9.99□□□□□ -0.81
SMG1-203ENST00000532700 TEX49A0A1B0GTD5 131 aa9.98□□□□□ -0.81
SMG1-203ENST00000532700 H7C2G1 150 aa9.98□□□□□ -0.81
SMG1-203ENST00000532700 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
SMG1-203ENST00000532700 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
SMG1-203ENST00000532700 DEFB105AQ8NG35 78 aa9.98□□□□□ -0.81
SMG1-203ENST00000532700 LAMTOR3Q9UHA4 124 aa9.98□□□□□ -0.81
SMG1-203ENST00000532700 FAT4Q6V0I7 4981 aa9.97□□□□□ -0.81
SMG1-203ENST00000532700 FXYD2P54710 66 aa9.97□□□□□ -0.81
SMG1-203ENST00000532700 LINC00575Q6W349 94 aa9.97□□□□□ -0.81
SMG1-203ENST00000532700 PRO1854Q9UHT4 67 aa9.97□□□□□ -0.81
SMG1-203ENST00000532700 C9orf153Q5TBE3 101 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms