RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 IGLV6-57P01721 117 aa11.13□□□□□ -0.63
SSH3-209ENST00000532600 IFITM1P13164 125 aa11.13□□□□□ -0.63
SSH3-209ENST00000532600 KRTAP13-2Q52LG2 175 aa11.13□□□□□ -0.63
SSH3-209ENST00000532600 PPDPFQ9H3Y8 114 aa11.13□□□□□ -0.63
SSH3-209ENST00000532600 KCNQ1DNQ9H478 68 aa11.13□□□□□ -0.63
SSH3-209ENST00000532600 DDTP30046 118 aa11.12□□□□□ -0.63
SSH3-209ENST00000532600 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
SSH3-209ENST00000532600 UBE2AP49459 152 aa11.11□□□□□ -0.63
SSH3-209ENST00000532600 LINC00337Q8N6G1 96 aa11.11□□□□□ -0.63
SSH3-209ENST00000532600 LOC105371267A0A1B0GV96 52 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 PRYO14603 147 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 CRYGAP11844 174 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 SPRR1AP35321 89 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 PRLHP81277 87 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
SSH3-209ENST00000532600 KRTAP4-16G5E9R7 235 aaPredicted RBP11.09□□□□□ -0.63
SSH3-209ENST00000532600 TSPAN13O95857 204 aa11.09□□□□□ -0.63
SSH3-209ENST00000532600 PRR4Q16378 134 aa11.09□□□□□ -0.63
SSH3-209ENST00000532600 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
SSH3-209ENST00000532600 TYMSOSQ8TAI1 123 aa11.08□□□□□ -0.64
SSH3-209ENST00000532600 FAM19A1Q7Z5A9 133 aa11.07□□□□□ -0.64
SSH3-209ENST00000532600 HIGD1BQ9P298 99 aa11.07□□□□□ -0.64
SSH3-209ENST00000532600 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
SSH3-209ENST00000532600 HIST1H4GQ99525 98 aa11.05□□□□□ -0.64
SSH3-209ENST00000532600 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
SSH3-209ENST00000532600 A4D1N5 150 aa11.04□□□□□ -0.64
SSH3-209ENST00000532600 FAM229BQ4G0N7 80 aa11.04□□□□□ -0.64
SSH3-209ENST00000532600 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
SSH3-209ENST00000532600 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
SSH3-209ENST00000532600 MUC2Q02817 5179 aa11.01□□□□□ -0.65
SSH3-209ENST00000532600 B5MCH6 92 aa11.01□□□□□ -0.65
SSH3-209ENST00000532600 SMIM6P0DI80 62 aa11.01□□□□□ -0.65
SSH3-209ENST00000532600 S100A12P80511 92 aa11.01□□□□□ -0.65
SSH3-209ENST00000532600 ETDCA0A1B0GVM5 59 aa11□□□□□ -0.65
SSH3-209ENST00000532600 ZNF73O43830 326 aaPredicted RBP11□□□□□ -0.65
SSH3-209ENST00000532600 C12orf57Q99622 126 aa10.99□□□□□ -0.65
SSH3-209ENST00000532600 A6NDN8 102 aa10.98□□□□□ -0.65
SSH3-209ENST00000532600 SMCR5Q8TEV8 140 aa10.98□□□□□ -0.65
SSH3-209ENST00000532600 Q9BRP9 147 aa10.97□□□□□ -0.65
SSH3-209ENST00000532600 HIGD2AQ9BW72 106 aa10.97□□□□□ -0.65
SSH3-209ENST00000532600 PRO1933Q9H354 126 aa10.97□□□□□ -0.65
SSH3-209ENST00000532600 UQCR10Q9UDW1 63 aa10.97□□□□□ -0.65
SSH3-209ENST00000532600 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
SSH3-209ENST00000532600 C3orf22Q8N5N4 141 aa10.96□□□□□ -0.65
SSH3-209ENST00000532600 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
SSH3-209ENST00000532600 ERC2-IT1O76042 136 aa10.95□□□□□ -0.66
SSH3-209ENST00000532600 Q6ZRX8 168 aa10.95□□□□□ -0.66
SSH3-209ENST00000532600 CEND1Q8N111 149 aa10.95□□□□□ -0.66
SSH3-209ENST00000532600 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
SSH3-209ENST00000532600 TAL2Q16559 108 aa10.94□□□□□ -0.66
SSH3-209ENST00000532600 C6orf99Q4VX62 202 aa10.94□□□□□ -0.66
SSH3-209ENST00000532600 CFC1BP0CG36 223 aa10.93□□□□□ -0.66
SSH3-209ENST00000532600 CFC1P0CG37 223 aa10.93□□□□□ -0.66
SSH3-209ENST00000532600 FXYD2P54710 66 aa10.93□□□□□ -0.66
SSH3-209ENST00000532600 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
SSH3-209ENST00000532600 SPRR4Q96PI1 79 aa10.93□□□□□ -0.66
SSH3-209ENST00000532600 CBY1Q9Y3M2 126 aa10.92□□□□□ -0.66
SSH3-209ENST00000532600 HSD52Q0P140 79 aa10.91□□□□□ -0.66
SSH3-209ENST00000532600 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
SSH3-209ENST00000532600 COX7BP24311 80 aa10.88□□□□□ -0.67
SSH3-209ENST00000532600 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
SSH3-209ENST00000532600 TRBV7-6A0A0J9YX20 115 aa10.86□□□□□ -0.67
SSH3-209ENST00000532600 HINT1P49773 126 aaPredicted RBP10.86□□□□□ -0.67
SSH3-209ENST00000532600 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
SSH3-209ENST00000532600 MUC17Q685J3 4493 aa10.84□□□□□ -0.67
SSH3-209ENST00000532600 A0A1B0GWB2 263 aa10.83□□□□□ -0.68
SSH3-209ENST00000532600 H7C2G1 150 aa10.83□□□□□ -0.68
SSH3-209ENST00000532600 CTAG1AP78358 180 aa10.83□□□□□ -0.68
SSH3-209ENST00000532600 RAB37Q96AX2 223 aa10.83□□□□□ -0.68
SSH3-209ENST00000532600 TMEM238LA0A1B0GVL6 79 aa10.82□□□□□ -0.68
SSH3-209ENST00000532600 A6NJY4 79 aa10.82□□□□□ -0.68
SSH3-209ENST00000532600 K7ERJ3 54 aa10.82□□□□□ -0.68
SSH3-209ENST00000532600 ZNF706Q9Y5V0 76 aaPredicted RBP10.82□□□□□ -0.68
SSH3-209ENST00000532600 LINC00483Q53H64 154 aa10.81□□□□□ -0.68
SSH3-209ENST00000532600 BVES-AS1Q5T3Y7 98 aa10.81□□□□□ -0.68
SSH3-209ENST00000532600 DHRS4-AS1Q9P1J3 65 aa10.81□□□□□ -0.68
SSH3-209ENST00000532600 IGLV7-46A0A075B6I9 117 aa10.8□□□□□ -0.68
SSH3-209ENST00000532600 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
SSH3-209ENST00000532600 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
SSH3-209ENST00000532600 NHP2Q9NX24 153 aaKnown RBP10.8□□□□□ -0.68
SSH3-209ENST00000532600 Q8NBF4 154 aa10.79□□□□□ -0.68
SSH3-209ENST00000532600 PRO1854Q9UHT4 67 aa10.79□□□□□ -0.68
SSH3-209ENST00000532600 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
SSH3-209ENST00000532600 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
SSH3-209ENST00000532600 TSTD3H0UI37 97 aa10.75□□□□□ -0.69
SSH3-209ENST00000532600 FAT4Q6V0I7 4981 aa10.75□□□□□ -0.69
SSH3-209ENST00000532600 LINC01547P58512 204 aaPredicted RBP10.74□□□□□ -0.69
SSH3-209ENST00000532600 VAMP3Q15836 100 aa10.73□□□□□ -0.69
SSH3-209ENST00000532600 CDIP1Q9H305 208 aa10.73□□□□□ -0.69
SSH3-209ENST00000532600 SPRR1BP22528 89 aa10.72□□□□□ -0.69
SSH3-209ENST00000532600 Q1RN00 199 aa10.72□□□□□ -0.69
SSH3-209ENST00000532600 TRIAP1O43715 76 aa10.71□□□□□ -0.69
SSH3-209ENST00000532600 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
SSH3-209ENST00000532600 DEFB105AQ8NG35 78 aa10.7□□□□□ -0.7
SSH3-209ENST00000532600 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
SSH3-209ENST00000532600 MOBPQ13875 183 aa10.69□□□□□ -0.7
SSH3-209ENST00000532600 C4orf48Q5BLP8 95 aa10.69□□□□□ -0.7
SSH3-209ENST00000532600 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
SSH3-209ENST00000532600 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
SSH3-209ENST00000532600 FP248Q71RG6 208 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms