RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
PTPRK-219ENST00000531050 Q8N377 158 aa5.06□□□□□ -1.6
PTPRK-219ENST00000531050 C9orf163Q8N9P6 203 aa5.06□□□□□ -1.6
PTPRK-219ENST00000531050 MAPK1IP1LQ8NDC0 245 aa5.06□□□□□ -1.6
PTPRK-219ENST00000531050 ZNF702PQ9H963 129 aa5.06□□□□□ -1.6
PTPRK-219ENST00000531050 USP9XQ93008 2570 aaPredicted RBP5.06□□□□□ -1.6
PTPRK-219ENST00000531050 DNAJC9-AS1A6NH13 148 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 FSHBP01225 129 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 DEFB116Q30KQ4 102 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 CYSRT1A8MQ03 144 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 DEFB136Q30KP8 78 aa5.05□□□□□ -1.6
PTPRK-219ENST00000531050 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 Q6YL49 198 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 C18orf65Q6ZTR6 163 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 SPG11Q96JI7 2443 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 FLNCQ14315 2725 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 MYO18BQ8IUG5 2567 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 CRYBG3Q68DQ2 2970 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 IGKV2D-24A0A075B6R9 120 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
PTPRK-219ENST00000531050 Q8NBF4 154 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 DEFB105AQ8NG35 78 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 CSPG4Q6UVK1 2322 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 H0Y9P7 68 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 PLA2G1BP04054 148 aaKnown RBP5.03□□□□□ -1.6
PTPRK-219ENST00000531050 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 WFDC13Q8IUB5 93 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 Q8NAQ8 132 aa5.03□□□□□ -1.6
PTPRK-219ENST00000531050 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 H3BPC8 53 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 GIG44P09565 113 aaPredicted RBP5.02□□□□□ -1.61
PTPRK-219ENST00000531050 CNBPP62633 177 aaKnown RBP5.02□□□□□ -1.61
PTPRK-219ENST00000531050 SERTAD4-AS1Q5TG53 156 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 C16orf74Q96GX8 76 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 SPRR4Q96PI1 79 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
PTPRK-219ENST00000531050 GVQW2A0A096LPI5 108 aaPredicted RBP5.02□□□□□ -1.61
PTPRK-219ENST00000531050 TNP2Q05952 138 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 CSNK1G2-AS1Q8NCQ2 148 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 C6orf48Q9UBA6 75 aa5.02□□□□□ -1.61
PTPRK-219ENST00000531050 C1orf137Q5JT78 98 aa5.01□□□□□ -1.61
PTPRK-219ENST00000531050 FBN2P35556 2912 aa5.01□□□□□ -1.61
PTPRK-219ENST00000531050 UBR5O95071 2799 aaPredicted RBP5.01□□□□□ -1.61
PTPRK-219ENST00000531050 TENM4Q6N022 2769 aa5.01□□□□□ -1.61
PTPRK-219ENST00000531050 ANKRD17O75179 2603 aaKnown RBP5.01□□□□□ -1.61
PTPRK-219ENST00000531050 GYPEP15421 78 aa5.01□□□□□ -1.61
PTPRK-219ENST00000531050 REG3AQ06141 175 aa5.01□□□□□ -1.61
PTPRK-219ENST00000531050 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
PTPRK-219ENST00000531050 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
PTPRK-219ENST00000531050 KRTAP10-9P60411 292 aa5□□□□□ -1.61
PTPRK-219ENST00000531050 AKAP9Q99996 3911 aa5□□□□□ -1.61
PTPRK-219ENST00000531050 GCN1Q92616 2671 aaKnown RBP5□□□□□ -1.61
PTPRK-219ENST00000531050 CUBNO60494 3623 aa4.99□□□□□ -1.61
PTPRK-219ENST00000531050 J3QKU1 62 aa4.99□□□□□ -1.61
PTPRK-219ENST00000531050 WFDC10BQ8IUB3 73 aa4.99□□□□□ -1.61
PTPRK-219ENST00000531050 C7orf33Q8WU49 177 aa4.99□□□□□ -1.61
PTPRK-219ENST00000531050 HELZ2Q9BYK8 2649 aaKnown RBP4.99□□□□□ -1.61
PTPRK-219ENST00000531050 A0A096LPF7 62 aa4.99□□□□□ -1.61
PTPRK-219ENST00000531050 ANGP03950 147 aaKnown RBP4.99□□□□□ -1.61
PTPRK-219ENST00000531050 DEFB113Q30KQ7 82 aa4.98□□□□□ -1.61
PTPRK-219ENST00000531050 C4orf3Q8WVX3 66 aa4.98□□□□□ -1.61
PTPRK-219ENST00000531050 LRRK2Q5S007 2527 aa4.98□□□□□ -1.61
PTPRK-219ENST00000531050 ZANQ9Y493 2812 aa4.98□□□□□ -1.61
PTPRK-219ENST00000531050 IGLV1-50A0A075B6I6 118 aa4.97□□□□□ -1.61
PTPRK-219ENST00000531050 POLQO75417 2590 aa4.97□□□□□ -1.61
PTPRK-219ENST00000531050 USP9YO00507 2555 aaPredicted RBP4.97□□□□□ -1.61
PTPRK-219ENST00000531050 FASNP49327 2511 aaKnown RBP4.97□□□□□ -1.61
PTPRK-219ENST00000531050 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.61
PTPRK-219ENST00000531050 LINC00476Q8WZB0 136 aa4.96□□□□□ -1.61
PTPRK-219ENST00000531050 RTL8CO15255 209 aa4.96□□□□□ -1.62
PTPRK-219ENST00000531050 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
PTPRK-219ENST00000531050 DEFB130BP0DP73 79 aa4.95□□□□□ -1.62
PTPRK-219ENST00000531050 DEFB130AP0DP74 79 aa4.95□□□□□ -1.62
PTPRK-219ENST00000531050 MXRA5Q9NR99 2828 aa4.95□□□□□ -1.62
PTPRK-219ENST00000531050 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
PTPRK-219ENST00000531050 J3QL48 77 aa4.94□□□□□ -1.62
PTPRK-219ENST00000531050 OTOGQ6ZRI0 2925 aa4.94□□□□□ -1.62
PTPRK-219ENST00000531050 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
PTPRK-219ENST00000531050 APCP25054 2843 aa4.93□□□□□ -1.62
PTPRK-219ENST00000531050 PTPN13Q12923 2485 aa4.93□□□□□ -1.62
PTPRK-219ENST00000531050 SETXQ7Z333 2677 aaKnown RBP4.93□□□□□ -1.62
PTPRK-219ENST00000531050 JMJD1CQ15652 2540 aa4.93□□□□□ -1.62
PTPRK-219ENST00000531050 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
PTPRK-219ENST00000531050 A0A087X002 238 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 A0A0G2JQZ4 141 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 A0A1W2PNN7 141 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 IGLV1-51P01701 117 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 HRES1P13985 223 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 CENPEQ02224 2701 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 NAV2Q8IVL1 2488 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 NF1P21359 2839 aa4.92□□□□□ -1.62
PTPRK-219ENST00000531050 TEX15Q9BXT5 2789 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 DHRS4-AS1Q9P1J3 65 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 PRO0255Q9UI72 69 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 ABCA12Q86UK0 2595 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 EGFEM1PQ0D2K5 195 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 HECTD1Q9ULT8 2610 aa4.91□□□□□ -1.62
PTPRK-219ENST00000531050 Q6ZRX8 168 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms