RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C9orf153Q5TBE3 101 aa6.11□□□□□ -1.43
AMBRA1-207ENST00000529553 LINC00158P58513 81 aa6.1□□□□□ -1.43
AMBRA1-207ENST00000529553 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
AMBRA1-207ENST00000529553 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
AMBRA1-207ENST00000529553 IFI27L1Q96BM0 104 aa6.08□□□□□ -1.44
AMBRA1-207ENST00000529553 Q9BRP9 147 aa6.08□□□□□ -1.44
AMBRA1-207ENST00000529553 TRAV12-1A0A0B4J245 112 aa6.07□□□□□ -1.44
AMBRA1-207ENST00000529553 TRBV10-3A0A0K0K1G6 114 aa6.07□□□□□ -1.44
AMBRA1-207ENST00000529553 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
AMBRA1-207ENST00000529553 Q6Q795 121 aa6.07□□□□□ -1.44
AMBRA1-207ENST00000529553 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
AMBRA1-207ENST00000529553 LEPROTL1O95214 131 aa6.06□□□□□ -1.44
AMBRA1-207ENST00000529553 ZNF22P17026 224 aaPredicted RBP6.06□□□□□ -1.44
AMBRA1-207ENST00000529553 NDUFA6P56556 154 aa6.06□□□□□ -1.44
AMBRA1-207ENST00000529553 Q6ZRX8 168 aa6.06□□□□□ -1.44
AMBRA1-207ENST00000529553 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
AMBRA1-207ENST00000529553 LCE2BO14633 110 aa6.05□□□□□ -1.44
AMBRA1-207ENST00000529553 NCR3O14931 201 aa6.05□□□□□ -1.44
AMBRA1-207ENST00000529553 FABP4P15090 132 aa6.05□□□□□ -1.44
AMBRA1-207ENST00000529553 JOSD1Q15040 202 aaPredicted RBP6.04□□□□□ -1.44
AMBRA1-207ENST00000529553 KRTAP6-3Q3LI67 103 aa6.04□□□□□ -1.44
AMBRA1-207ENST00000529553 CHTOPQ9Y3Y2 248 aaKnown RBP6.04□□□□□ -1.44
AMBRA1-207ENST00000529553 CD164Q04900 197 aa6.03□□□□□ -1.44
AMBRA1-207ENST00000529553 Q5XG85 94 aa6.03□□□□□ -1.44
AMBRA1-207ENST00000529553 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
AMBRA1-207ENST00000529553 HSPB8Q9UJY1 196 aa6.03□□□□□ -1.44
AMBRA1-207ENST00000529553 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
AMBRA1-207ENST00000529553 SLC25A34Q6PIV7 304 aa6.02□□□□□ -1.45
AMBRA1-207ENST00000529553 HIST3H2BBQ8N257 126 aa6.01□□□□□ -1.45
AMBRA1-207ENST00000529553 TRBV10-2A0A0K0K1G8 114 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 TMEM223A0PJW6 202 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 C20orf202A1L168 122 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 LINC00587B1AMM8 73 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 H0Y8G0 127 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 SYS1-DBNDD2H3BUS1 97 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 MT2AP02795 61 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 C3orf79P0CE67 100 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 SMIM13P0DJ93 91 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 SPRR1BP22528 89 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 DDTP30046 118 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 C1orf195Q5TG92 126 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 MIR7-3HGQ8N6C7 128 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 PMCHL2Q9BQD1 86 aa6□□□□□ -1.45
AMBRA1-207ENST00000529553 LINC01545Q5VT33 79 aa5.99□□□□□ -1.45
AMBRA1-207ENST00000529553 ST20-AS1Q8NBB2 130 aa5.99□□□□□ -1.45
AMBRA1-207ENST00000529553 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
AMBRA1-207ENST00000529553 KRTAP9-3Q9BYQ3 159 aa5.99□□□□□ -1.45
AMBRA1-207ENST00000529553 LOC107984156A0A0G2JMH3 177 aa5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 SNRPEP62304 92 aaKnown RBP5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 TMEM170BQ5T4T1 132 aa5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 PET117Q6UWS5 81 aa5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 ARL17AQ8IVW1 177 aa5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 HIST1H2BLQ99880 126 aa5.98□□□□□ -1.45
AMBRA1-207ENST00000529553 DPM2O94777 84 aa5.97□□□□□ -1.45
AMBRA1-207ENST00000529553 HERV-K104P63124 156 aa5.97□□□□□ -1.45
AMBRA1-207ENST00000529553 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
AMBRA1-207ENST00000529553 LAMTOR3Q9UHA4 124 aa5.97□□□□□ -1.45
AMBRA1-207ENST00000529553 IGKCP01834 107 aa5.96□□□□□ -1.46
AMBRA1-207ENST00000529553 PLNP26678 52 aa5.96□□□□□ -1.46
AMBRA1-207ENST00000529553 TSPEAR-AS2P59090 65 aa5.96□□□□□ -1.46
AMBRA1-207ENST00000529553 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
AMBRA1-207ENST00000529553 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.46
AMBRA1-207ENST00000529553 H7C2G1 150 aa5.95□□□□□ -1.46
AMBRA1-207ENST00000529553 KRTDAPP60985 99 aa5.95□□□□□ -1.46
AMBRA1-207ENST00000529553 PRO1933Q9H354 126 aa5.95□□□□□ -1.46
AMBRA1-207ENST00000529553 MT1FP04733 61 aa5.94□□□□□ -1.46
AMBRA1-207ENST00000529553 S100A6P06703 90 aa5.94□□□□□ -1.46
AMBRA1-207ENST00000529553 SMIM29Q86T20 159 aa5.94□□□□□ -1.46
AMBRA1-207ENST00000529553 LEPROTO15243 131 aa5.93□□□□□ -1.46
AMBRA1-207ENST00000529553 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
AMBRA1-207ENST00000529553 NEBP20929 6669 aa5.93□□□□□ -1.46
AMBRA1-207ENST00000529553 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 ZNF73O43830 326 aaPredicted RBP5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 S100A2P29034 98 aa5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 HINT1P49773 126 aaPredicted RBP5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
AMBRA1-207ENST00000529553 E9PLD3 99 aa5.91□□□□□ -1.46
AMBRA1-207ENST00000529553 NDUFC2O95298 119 aa5.91□□□□□ -1.46
AMBRA1-207ENST00000529553 Q75L30 129 aa5.91□□□□□ -1.46
AMBRA1-207ENST00000529553 CBY1Q9Y3M2 126 aa5.91□□□□□ -1.46
AMBRA1-207ENST00000529553 J3QQQ9 107 aa5.9□□□□□ -1.46
AMBRA1-207ENST00000529553 AKR1D1P51857 326 aa5.9□□□□□ -1.46
AMBRA1-207ENST00000529553 ANKRD39Q53RE8 183 aa5.9□□□□□ -1.46
AMBRA1-207ENST00000529553 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
AMBRA1-207ENST00000529553 MYMXA0A1B0GTQ4 84 aa5.89□□□□□ -1.47
AMBRA1-207ENST00000529553 HERVK_113P61574 105 aa5.89□□□□□ -1.47
AMBRA1-207ENST00000529553 ATOH7Q8N100 152 aa5.89□□□□□ -1.47
AMBRA1-207ENST00000529553 TRBV20-1A0A075B6N2 111 aa5.88□□□□□ -1.47
AMBRA1-207ENST00000529553 TTTY13Q9BZ97 58 aa5.88□□□□□ -1.47
AMBRA1-207ENST00000529553 TMA7Q9Y2S6 64 aaKnown RBP5.88□□□□□ -1.47
AMBRA1-207ENST00000529553 TCL1BO95988 128 aa5.87□□□□□ -1.47
AMBRA1-207ENST00000529553 LGALS3P17931 250 aaKnown RBP5.86□□□□□ -1.47
AMBRA1-207ENST00000529553 NMUP48645 174 aa5.86□□□□□ -1.47
AMBRA1-207ENST00000529553 Q1RN00 199 aa5.86□□□□□ -1.47
AMBRA1-207ENST00000529553 A0A0J9YXY3 114 aa5.85□□□□□ -1.47
AMBRA1-207ENST00000529553 TAL2Q16559 108 aa5.85□□□□□ -1.47
AMBRA1-207ENST00000529553 LITAFQ99732 161 aa5.85□□□□□ -1.47
AMBRA1-207ENST00000529553 MIEN1Q9BRT3 115 aa5.85□□□□□ -1.47
AMBRA1-207ENST00000529553 TEX49A0A1B0GTD5 131 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms