RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 IFITM1P13164 125 aa11.69□□□□□ -0.54
EXOSC4-202ENST00000525936 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
EXOSC4-202ENST00000525936 ETDCA0A1B0GVM5 59 aa11.68□□□□□ -0.54
EXOSC4-202ENST00000525936 CRYGAP11844 174 aa11.68□□□□□ -0.54
EXOSC4-202ENST00000525936 TRAV23DV6A0A075B6W5 121 aa11.67□□□□□ -0.54
EXOSC4-202ENST00000525936 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
EXOSC4-202ENST00000525936 SMCR5Q8TEV8 140 aa11.67□□□□□ -0.54
EXOSC4-202ENST00000525936 KRTAP13-2Q52LG2 175 aa11.66□□□□□ -0.54
EXOSC4-202ENST00000525936 COPS9Q8WXC6 57 aa11.66□□□□□ -0.54
EXOSC4-202ENST00000525936 ZNF73O43830 326 aaPredicted RBP11.65□□□□□ -0.54
EXOSC4-202ENST00000525936 Q6ZRX8 168 aa11.64□□□□□ -0.55
EXOSC4-202ENST00000525936 MUSTN1Q8IVN3 82 aa11.64□□□□□ -0.55
EXOSC4-202ENST00000525936 SPRR4Q96PI1 79 aa11.64□□□□□ -0.55
EXOSC4-202ENST00000525936 Q9BRP9 147 aa11.63□□□□□ -0.55
EXOSC4-202ENST00000525936 CBY1Q9Y3M2 126 aa11.63□□□□□ -0.55
EXOSC4-202ENST00000525936 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
EXOSC4-202ENST00000525936 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
EXOSC4-202ENST00000525936 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
EXOSC4-202ENST00000525936 TYMSOSQ8TAI1 123 aa11.6□□□□□ -0.55
EXOSC4-202ENST00000525936 ZNF706Q9Y5V0 76 aaPredicted RBP11.6□□□□□ -0.55
EXOSC4-202ENST00000525936 COX8AP10176 69 aa11.59□□□□□ -0.55
EXOSC4-202ENST00000525936 DLEU1O43261 78 aa11.58□□□□□ -0.56
EXOSC4-202ENST00000525936 LINC00483Q53H64 154 aa11.57□□□□□ -0.56
EXOSC4-202ENST00000525936 HINT1P49773 126 aaPredicted RBP11.54□□□□□ -0.56
EXOSC4-202ENST00000525936 C3orf22Q8N5N4 141 aa11.53□□□□□ -0.56
EXOSC4-202ENST00000525936 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
EXOSC4-202ENST00000525936 TRAV13-2A0A0B4J235 113 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 A6NDN8 102 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 ELOF1P60002 83 aaKnown RBP11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 C6orf99Q4VX62 202 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 SPATA45Q537H7 98 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 C14orf144Q96I85 54 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 UBR4Q5T4S7 5183 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 LRP2P98164 4655 aa11.51□□□□□ -0.57
EXOSC4-202ENST00000525936 VAMP8Q9BV40 100 aa11.5□□□□□ -0.57
EXOSC4-202ENST00000525936 A4D1N5 150 aa11.49□□□□□ -0.57
EXOSC4-202ENST00000525936 PYY3Q5JQD4 70 aa11.49□□□□□ -0.57
EXOSC4-202ENST00000525936 GAGE2AQ6NT46 116 aa11.49□□□□□ -0.57
EXOSC4-202ENST00000525936 DHRS4-AS1Q9P1J3 65 aa11.49□□□□□ -0.57
EXOSC4-202ENST00000525936 TMA7Q9Y2S6 64 aaKnown RBP11.49□□□□□ -0.57
EXOSC4-202ENST00000525936 COX7BP24311 80 aa11.48□□□□□ -0.57
EXOSC4-202ENST00000525936 LINC00304Q8N9R0 145 aa11.48□□□□□ -0.57
EXOSC4-202ENST00000525936 HIGD1BQ9P298 99 aa11.48□□□□□ -0.57
EXOSC4-202ENST00000525936 CTAG1AP78358 180 aa11.47□□□□□ -0.57
EXOSC4-202ENST00000525936 TSPAN13O95857 204 aa11.46□□□□□ -0.57
EXOSC4-202ENST00000525936 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.57
EXOSC4-202ENST00000525936 HIST1H4GQ99525 98 aa11.46□□□□□ -0.57
EXOSC4-202ENST00000525936 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
EXOSC4-202ENST00000525936 SMIM11BQ8TCY0 68 aa11.45□□□□□ -0.58
EXOSC4-202ENST00000525936 C2orf91Q6ZV80 131 aa11.44□□□□□ -0.58
EXOSC4-202ENST00000525936 A0A1B0GWB2 263 aa11.43□□□□□ -0.58
EXOSC4-202ENST00000525936 SPRR1BP22528 89 aa11.43□□□□□ -0.58
EXOSC4-202ENST00000525936 LPAP08519 4548 aa11.41□□□□□ -0.58
EXOSC4-202ENST00000525936 SPAG11AQ6PDA7 123 aa11.4□□□□□ -0.58
EXOSC4-202ENST00000525936 SSBP3-AS1Q7Z2R9 100 aa11.4□□□□□ -0.58
EXOSC4-202ENST00000525936 Q8NBF4 154 aa11.39□□□□□ -0.59
EXOSC4-202ENST00000525936 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
EXOSC4-202ENST00000525936 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
EXOSC4-202ENST00000525936 CFC1P0CG37 223 aa11.36□□□□□ -0.59
EXOSC4-202ENST00000525936 MOBPQ13875 183 aa11.36□□□□□ -0.59
EXOSC4-202ENST00000525936 TAL2Q16559 108 aa11.36□□□□□ -0.59
EXOSC4-202ENST00000525936 C12orf57Q99622 126 aa11.36□□□□□ -0.59
EXOSC4-202ENST00000525936 PRR4Q16378 134 aa11.34□□□□□ -0.59
EXOSC4-202ENST00000525936 IGLV5-48A0A075B6I7 105 aa11.33□□□□□ -0.6
EXOSC4-202ENST00000525936 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
EXOSC4-202ENST00000525936 VAMP3Q15836 100 aa11.33□□□□□ -0.6
EXOSC4-202ENST00000525936 SPINK1P00995 79 aa11.32□□□□□ -0.6
EXOSC4-202ENST00000525936 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
EXOSC4-202ENST00000525936 TEX49A0A1B0GTD5 131 aa11.31□□□□□ -0.6
EXOSC4-202ENST00000525936 LINC00575Q6W349 94 aa11.31□□□□□ -0.6
EXOSC4-202ENST00000525936 CEND1Q8N111 149 aa11.31□□□□□ -0.6
EXOSC4-202ENST00000525936 NHP2Q9NX24 153 aaKnown RBP11.31□□□□□ -0.6
EXOSC4-202ENST00000525936 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
EXOSC4-202ENST00000525936 SMIM29Q86T20 159 aa11.3□□□□□ -0.6
EXOSC4-202ENST00000525936 DEFB105AQ8NG35 78 aa11.29□□□□□ -0.6
EXOSC4-202ENST00000525936 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
EXOSC4-202ENST00000525936 LAMTOR3Q9UHA4 124 aa11.28□□□□□ -0.6
EXOSC4-202ENST00000525936 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.61
EXOSC4-202ENST00000525936 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.61
EXOSC4-202ENST00000525936 SLC25A20O43772 301 aa11.26□□□□□ -0.61
EXOSC4-202ENST00000525936 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
EXOSC4-202ENST00000525936 RAB37Q96AX2 223 aa11.26□□□□□ -0.61
EXOSC4-202ENST00000525936 FXYD2P54710 66 aa11.25□□□□□ -0.61
EXOSC4-202ENST00000525936 Q8N377 158 aa11.25□□□□□ -0.61
EXOSC4-202ENST00000525936 RNF213Q63HN8 5207 aa11.24□□□□□ -0.61
EXOSC4-202ENST00000525936 hADV29S1A0JD25 119 aa11.24□□□□□ -0.61
EXOSC4-202ENST00000525936 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
EXOSC4-202ENST00000525936 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
EXOSC4-202ENST00000525936 A6NJY4 79 aa11.23□□□□□ -0.61
EXOSC4-202ENST00000525936 HSD52Q0P140 79 aa11.23□□□□□ -0.61
EXOSC4-202ENST00000525936 Q1RN00 199 aa11.23□□□□□ -0.61
EXOSC4-202ENST00000525936 H7C2G1 150 aa11.22□□□□□ -0.61
EXOSC4-202ENST00000525936 PRO1854Q9UHT4 67 aa11.22□□□□□ -0.61
EXOSC4-202ENST00000525936 Q6ZQY7 126 aa11.2□□□□□ -0.62
EXOSC4-202ENST00000525936 IGLV7-46A0A075B6I9 117 aa11.18□□□□□ -0.62
EXOSC4-202ENST00000525936 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.18□□□□□ -0.62
EXOSC4-202ENST00000525936 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
EXOSC4-202ENST00000525936 H0YGX0 51 aa11.17□□□□□ -0.62
EXOSC4-202ENST00000525936 PRO1933Q9H354 126 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms