RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 H3BUT2 72 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 M0R2N4 97 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 NDUFS5O43920 106 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 MGPP08493 103 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 COX7CP15954 63 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 MIR7-3HGQ8N6C7 128 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 PPDPFLQ8WWR9 84 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 CHCHD7Q9BUK0 85 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 DPH3P1Q9H4G8 78 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 SERP1Q9Y6X1 66 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 V9GYV3 84 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
CD44-219ENST00000525685 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
CD44-219ENST00000525685 TRBV7-7A0A0K0K1E9 115 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 HIGD1CA8MV81 97 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 A8MWL6 223 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 F2Z2F3 143 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 M0QY20 66 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 UBE2D3P61077 147 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 UBE2D2P62837 147 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 ETDBQ3ZM63 59 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 LELP1Q5T871 98 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 LINC01545Q5VT33 79 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 ATP5L2Q7Z4Y8 100 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 ST20-AS1Q8NBB2 130 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 TSKUQ8WUA8 353 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
CD44-219ENST00000525685 DNAH11Q96DT5 4516 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 TRBV7-3A0A075B6L6 115 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 A0A1B0GUT8 65 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 SMIM27A0A1W2PRY6 76 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 H3BT86 120 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 IGHV3-30P01768 117 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 IGHV3-33P01772 117 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 IGHV3-30-3P0DP02 117 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 IGHV3-30-5P0DP03 117 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 WFDC2Q14508 124 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 LINC01556Q5JQF7 62 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 Q6ZRN7 208 aaPredicted RBP2.03□□□□□ -2.08
CD44-219ENST00000525685 SPATA12Q7Z6I5 190 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 RPL39LQ96EH5 51 aaKnown RBP2.03□□□□□ -2.08
CD44-219ENST00000525685 FAT2Q9NYQ8 4349 aa2.03□□□□□ -2.08
CD44-219ENST00000525685 TRBV6-8A0A0A6YYG3 113 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 TRAV8-3A0A0A6YYJ7 113 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 IGKV2-24A0A0C4DH68 120 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 PSMB2P49721 201 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 HBBP68871 147 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
CD44-219ENST00000525685 AMN1Q8IY45 258 aa2.02□□□□□ -2.09
CD44-219ENST00000525685 RYR1P21817 5038 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TRBV25-1A0A075B6N4 114 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TRAV9-1A0A075B6T8 112 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 IGHV1-24A0A0C4DH33 117 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TRBV6-5A0A0K0K1A5 114 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TRBV27A0A0K0K1C4 114 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 SDHAF1A6NFY7 115 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 IBA57-AS1B1ANH7 110 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 M0R378 163 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 UBE2L6O14933 153 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 IGKCP01834 107 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 SMIM13P0DJ93 91 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 LGALS3P17931 250 aaKnown RBP2.01□□□□□ -2.09
CD44-219ENST00000525685 NPC2P61916 151 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 MRPL51Q4U2R6 128 aaKnown RBP2.01□□□□□ -2.09
CD44-219ENST00000525685 FAM104BQ5XKR9 115 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TMEM136Q6ZRR5 245 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 SPANXA2-OT1Q8N9U9 137 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 DEFB104AQ8WTQ1 72 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 TOMM6Q96B49 74 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 LINC01600Q96MT4 127 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 DSCR8Q96T75 97 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 DNAH5Q8TE73 4624 aa2.01□□□□□ -2.09
CD44-219ENST00000525685 HECTD4Q9Y4D8 3996 aa2□□□□□ -2.09
CD44-219ENST00000525685 HERC2O95714 4834 aa2□□□□□ -2.09
CD44-219ENST00000525685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
CD44-219ENST00000525685 A0A087WTM6 91 aa2□□□□□ -2.09
CD44-219ENST00000525685 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
CD44-219ENST00000525685 A8MUN3 132 aa2□□□□□ -2.09
CD44-219ENST00000525685 D6R8Y8 96 aa2□□□□□ -2.09
CD44-219ENST00000525685 I3L3M4 83 aa2□□□□□ -2.09
CD44-219ENST00000525685 ATOX1O00244 68 aa2□□□□□ -2.09
CD44-219ENST00000525685 LST1O00453 97 aa2□□□□□ -2.09
CD44-219ENST00000525685 ZNF73O43830 326 aaPredicted RBP2□□□□□ -2.09
CD44-219ENST00000525685 NUPR1O60356 82 aa2□□□□□ -2.09
CD44-219ENST00000525685 TCL1BO95988 128 aa2□□□□□ -2.09
CD44-219ENST00000525685 NPYP01303 97 aa2□□□□□ -2.09
CD44-219ENST00000525685 CRPP02741 224 aa2□□□□□ -2.09
CD44-219ENST00000525685 C3orf79P0CE67 100 aa2□□□□□ -2.09
CD44-219ENST00000525685 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
CD44-219ENST00000525685 MP68P56378 58 aa2□□□□□ -2.09
CD44-219ENST00000525685 KRTDAPP60985 99 aa2□□□□□ -2.09
CD44-219ENST00000525685 LUZP6Q538Z0 58 aa2□□□□□ -2.09
CD44-219ENST00000525685 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CD44-219ENST00000525685 CLPSL2Q6UWE3 100 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms