RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ELOF1P60002 83 aaKnown RBP5.61□□□□□ -1.51
CSMD1-213ENST00000523488 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
CSMD1-213ENST00000523488 NBEAL1Q6ZS30 2694 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 ITPR2Q14571 2701 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 SMR3AQ99954 134 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 IGLV5-48A0A075B6I7 105 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 NBEAL2Q6ZNJ1 2754 aa5.6□□□□□ -1.51
CSMD1-213ENST00000523488 TNP2Q05952 138 aa5.59□□□□□ -1.51
CSMD1-213ENST00000523488 ZNF702PQ9H963 129 aa5.59□□□□□ -1.51
CSMD1-213ENST00000523488 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
CSMD1-213ENST00000523488 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
CSMD1-213ENST00000523488 NF1P21359 2839 aa5.59□□□□□ -1.51
CSMD1-213ENST00000523488 SYCNQ0VAF6 134 aa5.59□□□□□ -1.52
CSMD1-213ENST00000523488 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.52
CSMD1-213ENST00000523488 C10orf25Q5T742 122 aa5.58□□□□□ -1.52
CSMD1-213ENST00000523488 MP68P56378 58 aa5.58□□□□□ -1.52
CSMD1-213ENST00000523488 REG3AQ06141 175 aa5.58□□□□□ -1.52
CSMD1-213ENST00000523488 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
CSMD1-213ENST00000523488 NDUFB1O75438 58 aa5.58□□□□□ -1.52
CSMD1-213ENST00000523488 A6NED7 52 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 CYSRT1A8MQ03 144 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 PSCAO43653 123 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 C4orf3Q8WVX3 66 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 DEFB4AO15263 64 aa5.57□□□□□ -1.52
CSMD1-213ENST00000523488 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
CSMD1-213ENST00000523488 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
CSMD1-213ENST00000523488 Q9BRP9 147 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 NOTCH1P46531 2555 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 NDUFS5O43920 106 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 SPANXA2-OT1Q8N9U9 137 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 C19orf73Q9NVV2 129 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 HCG22E2RYF7 251 aa5.56□□□□□ -1.52
CSMD1-213ENST00000523488 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
CSMD1-213ENST00000523488 FBN2P35556 2912 aa5.55□□□□□ -1.52
CSMD1-213ENST00000523488 LINC00528Q8N1L1 170 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 LIMD2Q9BT23 127 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 WFDC10AQ9H1F0 79 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 LINC00588Q9Y4M8 146 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 A0A087X002 238 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 B9D2Q9BPU9 175 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-213ENST00000523488 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 A8MU10 97 aa5.54□□□□□ -1.52
CSMD1-213ENST00000523488 CMC4P56277 68 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-213ENST00000523488 PRO0255Q9UI72 69 aa5.53□□□□□ -1.52
CSMD1-213ENST00000523488 UNC79Q9P2D8 2635 aa5.53□□□□□ -1.52
CSMD1-213ENST00000523488 STAB1Q9NY15 2570 aa5.53□□□□□ -1.52
CSMD1-213ENST00000523488 DNAJC9-AS1A6NH13 148 aa5.53□□□□□ -1.52
CSMD1-213ENST00000523488 M0R378 163 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 Q5VV11 94 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 LINC00208Q96KT6 92 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 PRR34Q9NV39 138 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 A6NN06 94 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 KPRPQ5T749 579 aaPredicted RBP5.52□□□□□ -1.53
CSMD1-213ENST00000523488 ATP11AUNQ6ZP68 121 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 KCNQ1DNQ9H478 68 aa5.52□□□□□ -1.53
CSMD1-213ENST00000523488 VPREB1P12018 145 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 Q6YL49 198 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 ST20-AS1Q8NBB2 130 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 CAMK2N2Q96S95 79 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 COL6A5A8TX70 2615 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 WFDC13Q8IUB5 93 aa5.51□□□□□ -1.53
CSMD1-213ENST00000523488 INAFM1C9JVW0 142 aa5.5□□□□□ -1.53
CSMD1-213ENST00000523488 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-213ENST00000523488 APOC4P55056 127 aa5.5□□□□□ -1.53
CSMD1-213ENST00000523488 C4orf48Q5BLP8 95 aa5.5□□□□□ -1.53
CSMD1-213ENST00000523488 Q75L30 129 aa5.5□□□□□ -1.53
CSMD1-213ENST00000523488 C1orf137Q5JT78 98 aa5.49□□□□□ -1.53
CSMD1-213ENST00000523488 H3BPC8 53 aa5.49□□□□□ -1.53
CSMD1-213ENST00000523488 DEFB116Q30KQ4 102 aa5.49□□□□□ -1.53
CSMD1-213ENST00000523488 KRTAP26-1Q6PEX3 210 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 NKAPP1Q8N9T2 125 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 C6orf48Q9UBA6 75 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 K7EQZ3 153 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 ANK2Q01484 3957 aa5.48□□□□□ -1.53
CSMD1-213ENST00000523488 IGLV5-37A0A075B6J1 123 aa5.47□□□□□ -1.53
CSMD1-213ENST00000523488 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-213ENST00000523488 C9orf163Q8N9P6 203 aa5.47□□□□□ -1.53
CSMD1-213ENST00000523488 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-213ENST00000523488 SPRR1AP35321 89 aa5.47□□□□□ -1.53
CSMD1-213ENST00000523488 DEFB135Q30KP9 77 aa5.46□□□□□ -1.53
CSMD1-213ENST00000523488 DSCR10P59022 87 aa5.46□□□□□ -1.54
CSMD1-213ENST00000523488 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 IGLV8-61A0A075B6I0 122 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 C11orf45Q8TAV5 145 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 A0A1W2PNM2 257 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 ASB16-AS1Q495Z4 193 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 Q8NBF4 154 aa5.45□□□□□ -1.54
CSMD1-213ENST00000523488 Q8N377 158 aa5.44□□□□□ -1.54
CSMD1-213ENST00000523488 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.54
CSMD1-213ENST00000523488 H0Y9P7 68 aa5.44□□□□□ -1.54
CSMD1-213ENST00000523488 DNAH3Q8TD57 4116 aa5.43□□□□□ -1.54
CSMD1-213ENST00000523488 LCA10Q71F78 164 aa5.43□□□□□ -1.54
CSMD1-213ENST00000523488 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
CSMD1-213ENST00000523488 EGFEM1PQ0D2K5 195 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms