RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SNCGO76070 127 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 ETDBQ3ZM63 59 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 SPINK6Q6UWN8 80 aa5.74□□□□□ -1.49
CTNNA1-221ENST00000520339 TRAV13-1A0A0B4J241 112 aa5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 A0A0J9YXV3 536 aa5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 MRPS36P82909 103 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 RNASE13Q5GAN3 156 aaKnown RBP5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 IMUPQ9GZP8 106 aa5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
CTNNA1-221ENST00000520339 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 A0A1B0GWB2 263 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 ZC2HC1BQ5TFG8 222 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 Q6ZRP5 223 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 C5orf38Q86SI9 138 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 TEN1Q86WV5 123 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 FAM104AQ969W3 186 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 C2orf48Q96LS8 159 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 AMELXQ99217 191 aa5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 OPRPNQ99935 248 aaPredicted RBP5.72□□□□□ -1.49
CTNNA1-221ENST00000520339 C11orf86A6NJI1 115 aa5.71□□□□□ -1.5
CTNNA1-221ENST00000520339 HERVK_113P61574 105 aa5.71□□□□□ -1.5
CTNNA1-221ENST00000520339 REG3GQ6UW15 175 aa5.71□□□□□ -1.5
CTNNA1-221ENST00000520339 CAMK2N2Q96S95 79 aa5.71□□□□□ -1.5
CTNNA1-221ENST00000520339 UQCRQO14949 82 aa5.7□□□□□ -1.5
CTNNA1-221ENST00000520339 NMUP48645 174 aa5.7□□□□□ -1.5
CTNNA1-221ENST00000520339 C9orf116Q5BN46 136 aaPredicted RBP5.7□□□□□ -1.5
CTNNA1-221ENST00000520339 V9GYY9 64 aa5.7□□□□□ -1.5
CTNNA1-221ENST00000520339 TRBV20-1A0A075B6N2 111 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 IGHV3OR16-9A0A0B4J2B5 98 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 SPAG11BQ08648 103 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 C6orf226Q5I0X4 101 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
CTNNA1-221ENST00000520339 TINCRA0A1B0GVN0 87 aa5.68□□□□□ -1.5
CTNNA1-221ENST00000520339 UBE2D1P51668 147 aa5.68□□□□□ -1.5
CTNNA1-221ENST00000520339 PSORS1C2Q9UIG4 136 aa5.68□□□□□ -1.5
CTNNA1-221ENST00000520339 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 ZNF22P17026 224 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 TMEM258P61165 79 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 HERVK_113P63121 156 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 PHF5AQ7RTV0 110 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 CEND1Q8N111 149 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 C3orf22Q8N5N4 141 aa5.67□□□□□ -1.5
CTNNA1-221ENST00000520339 IGLV5-45A0A087WSX0 123 aa5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 TMEM223A0PJW6 202 aa5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 RPL18AQ02543 176 aaKnown RBP5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 UNQ6190/PRO20217Q6UXQ8 127 aa5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 TP73-AS1Q9UF72 201 aa5.66□□□□□ -1.5
CTNNA1-221ENST00000520339 TLX1NBP0CAT3 122 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 CRYGAP11844 174 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 KIAA0087Q14695 138 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 FAM19A3Q7Z5A8 133 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 C6orf48Q9UBA6 75 aa5.65□□□□□ -1.5
CTNNA1-221ENST00000520339 A0A087WZ39 114 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 NDUFA1O15239 70 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 LEPROTO15243 131 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 LGALS3P17931 250 aaKnown RBP5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 C1orf137Q5JT78 98 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 C9orf153Q5TBE3 101 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 KRTAP5-3Q6L8H2 238 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
CTNNA1-221ENST00000520339 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 ZNF815PA8K554 130 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 J3QQQ9 107 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 SCGB1C2P0DMR2 95 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 RPL13AP40429 203 aaKnown RBP5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
CTNNA1-221ENST00000520339 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
CTNNA1-221ENST00000520339 LINC01561Q8N1V8 128 aa5.62□□□□□ -1.51
CTNNA1-221ENST00000520339 NDUFC2-KCTD14E9PQ53 114 aa5.61□□□□□ -1.51
CTNNA1-221ENST00000520339 FXYD2P54710 66 aa5.61□□□□□ -1.51
CTNNA1-221ENST00000520339 SCGB1D4Q6XE38 83 aa5.61□□□□□ -1.51
CTNNA1-221ENST00000520339 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
CTNNA1-221ENST00000520339 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-221ENST00000520339 TRBV30A0A0K0K1B3 111 aa5.6□□□□□ -1.51
CTNNA1-221ENST00000520339 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
CTNNA1-221ENST00000520339 ACYP1P07311 99 aa5.6□□□□□ -1.51
CTNNA1-221ENST00000520339 C2orf82Q6UX34 121 aa5.6□□□□□ -1.51
CTNNA1-221ENST00000520339 NHP2Q9NX24 153 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-221ENST00000520339 H0Y9J4 135 aa5.59□□□□□ -1.51
CTNNA1-221ENST00000520339 COX7CP15954 63 aa5.59□□□□□ -1.51
CTNNA1-221ENST00000520339 CXCL5P42830 114 aa5.59□□□□□ -1.51
CTNNA1-221ENST00000520339 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-221ENST00000520339 ANKRD29Q8N6D5 301 aa5.59□□□□□ -1.51
CTNNA1-221ENST00000520339 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
CTNNA1-221ENST00000520339 NDUFA12Q9UI09 145 aa5.58□□□□□ -1.52
CTNNA1-221ENST00000520339 IGKV2D-30A0A075B6S6 120 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms