RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ADAMTSL4-AS1Q5T5F5 129 aa4.8□□□□□ -1.64
PABPC1-213ENST00000519848 Q8N377 158 aa4.8□□□□□ -1.64
PABPC1-213ENST00000519848 ST20-AS1Q8NBB2 130 aa4.8□□□□□ -1.64
PABPC1-213ENST00000519848 LOC107984156A0A0G2JMH3 177 aa4.79□□□□□ -1.64
PABPC1-213ENST00000519848 SNAPINO95295 136 aa4.79□□□□□ -1.64
PABPC1-213ENST00000519848 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
PABPC1-213ENST00000519848 ARL17AQ8IVW1 177 aa4.79□□□□□ -1.64
PABPC1-213ENST00000519848 SVBPQ8N300 66 aa4.79□□□□□ -1.64
PABPC1-213ENST00000519848 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
PABPC1-213ENST00000519848 NPC2P61916 151 aa4.78□□□□□ -1.64
PABPC1-213ENST00000519848 ASB16-AS1Q495Z4 193 aa4.78□□□□□ -1.64
PABPC1-213ENST00000519848 LITAFQ99732 161 aa4.78□□□□□ -1.64
PABPC1-213ENST00000519848 LEPROTO15243 131 aa4.77□□□□□ -1.65
PABPC1-213ENST00000519848 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
PABPC1-213ENST00000519848 SFTA2Q6UW10 78 aa4.77□□□□□ -1.65
PABPC1-213ENST00000519848 Q6ZRX8 168 aa4.77□□□□□ -1.65
PABPC1-213ENST00000519848 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
PABPC1-213ENST00000519848 A0A0U1RQV1 116 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 ETDCA0A1B0GVM5 59 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 J3QQQ9 107 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 HSBP1O75506 76 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 DDTP30046 118 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 HERV-K104P63124 156 aa4.76□□□□□ -1.65
PABPC1-213ENST00000519848 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
PABPC1-213ENST00000519848 COLCA2A8K830 154 aa4.75□□□□□ -1.65
PABPC1-213ENST00000519848 FABP4P15090 132 aa4.75□□□□□ -1.65
PABPC1-213ENST00000519848 CTAG1AP78358 180 aa4.75□□□□□ -1.65
PABPC1-213ENST00000519848 SPAG11AQ6PDA7 123 aa4.75□□□□□ -1.65
PABPC1-213ENST00000519848 SLC7A5P1Q8MH63 180 aa4.75□□□□□ -1.65
PABPC1-213ENST00000519848 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
PABPC1-213ENST00000519848 MYMXA0A1B0GTQ4 84 aa4.74□□□□□ -1.65
PABPC1-213ENST00000519848 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
PABPC1-213ENST00000519848 ZNF706Q9Y5V0 76 aaPredicted RBP4.74□□□□□ -1.65
PABPC1-213ENST00000519848 A0A0G2JQZ4 141 aa4.73□□□□□ -1.65
PABPC1-213ENST00000519848 TRBV10-2A0A0K0K1G8 114 aa4.73□□□□□ -1.65
PABPC1-213ENST00000519848 SPINK1P00995 79 aa4.73□□□□□ -1.65
PABPC1-213ENST00000519848 SPANXB1Q9NS25 103 aaPredicted RBP4.73□□□□□ -1.65
PABPC1-213ENST00000519848 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
PABPC1-213ENST00000519848 DPM2O94777 84 aa4.72□□□□□ -1.65
PABPC1-213ENST00000519848 ATP6V1G1O75348 118 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 NDUFC2O95298 119 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 IGKCP01834 107 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 PLNP26678 52 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 MT1HP80294 61 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
PABPC1-213ENST00000519848 E9PLD3 99 aa4.7□□□□□ -1.66
PABPC1-213ENST00000519848 ZNF73O43830 326 aaPredicted RBP4.7□□□□□ -1.66
PABPC1-213ENST00000519848 KRTAP10-6P60371 365 aaPredicted RBP4.7□□□□□ -1.66
PABPC1-213ENST00000519848 RPS29P62273 56 aaKnown RBP4.7□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BKO60814 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BJP06899 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
PABPC1-213ENST00000519848 SPRR1BP22528 89 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BOP23527 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BBP33778 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BDP58876 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BCP62807 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST2H2BEQ16778 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 ANKRD39Q53RE8 183 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HRCT1Q6UXD1 115 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BHQ93079 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BNQ99877 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 HIST1H2BMQ99879 126 aa4.69□□□□□ -1.66
PABPC1-213ENST00000519848 LINC01547P58512 204 aaPredicted RBP4.68□□□□□ -1.66
PABPC1-213ENST00000519848 C9orf153Q5TBE3 101 aa4.68□□□□□ -1.66
PABPC1-213ENST00000519848 MAP1LC3CQ9BXW4 147 aa4.68□□□□□ -1.66
PABPC1-213ENST00000519848 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 C9orf92A6NGG3 77 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 NMUP48645 174 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 PCOTHQ58A44 107 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 S100A7L2Q5SY68 101 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
PABPC1-213ENST00000519848 SLC25A20O43772 301 aa4.66□□□□□ -1.66
PABPC1-213ENST00000519848 LINC00587B1AMM8 73 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 C3orf79P0CE67 100 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 ELOF1P60002 83 aaKnown RBP4.65□□□□□ -1.67
PABPC1-213ENST00000519848 SEC61BP60468 96 aaKnown RBP4.65□□□□□ -1.67
PABPC1-213ENST00000519848 HERVK_113P61574 105 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 Q1RN00 199 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 C6orf99Q4VX62 202 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
PABPC1-213ENST00000519848 H7C2G1 150 aa4.64□□□□□ -1.67
PABPC1-213ENST00000519848 MIEN1Q9BRT3 115 aa4.64□□□□□ -1.67
PABPC1-213ENST00000519848 SPANXCQ9NY87 97 aa4.64□□□□□ -1.67
PABPC1-213ENST00000519848 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
PABPC1-213ENST00000519848 TIMM17BO60830 172 aa4.63□□□□□ -1.67
PABPC1-213ENST00000519848 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
PABPC1-213ENST00000519848 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
PABPC1-213ENST00000519848 ATOH7Q8N100 152 aa4.62□□□□□ -1.67
PABPC1-213ENST00000519848 COX7BP24311 80 aa4.61□□□□□ -1.67
PABPC1-213ENST00000519848 C1orf195Q5TG92 126 aa4.61□□□□□ -1.67
PABPC1-213ENST00000519848 PCP2Q8IVA1 136 aa4.61□□□□□ -1.67
PABPC1-213ENST00000519848 OR13C6PQ8NH95 151 aa4.61□□□□□ -1.67
PABPC1-213ENST00000519848 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms